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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s13321-020-00477-w

https://doi.org/10.1186/s13321-020-00477-w

patRoon: open source software platform for environmental mass spectrometry based non-target screening

Cited by: 76
Author(s): Rick Helmus, Thomas L. ter Laak, Annemarie P. van Wezel, P. de Voogt, Emma L. Schymanski
Published: over 4 years ago

Software Mentions 20

bioconductor: CAMERA
Collection of annotation related methods for mass spectrometry data
Papers that mentioned: 429
Very Likely Science (75)
bioconductor: mzR
parser for netCDF, mzXML, mzData and mzML and mzIdentML files (mass spectrometry data)
Papers that mentioned: 12
Very Likely Science (100)
cran: circlize
Circular Visualization
Papers that mentioned: 260
Very Likely Science (100)
cran: enviPick
Peak Picking for High Resolution Mass Spectrometry Data
Papers that mentioned: 4
Very Likely Science (75)
cran: flexdashboard
R Markdown Format for Flexible Dashboards
Papers that mentioned: 4
Very Likely Science (100)
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
Very Likely Science (100)
cran: nontarget
Papers that mentioned: 2
Unlikely Science (0)
cran: processx
Execute and Control System Processes
Papers that mentioned: 2
Very Likely Science (75)
cran: RAMClustR
Mass Spectrometry Metabolomics Feature Clustering and Interpretation
Papers that mentioned: 11
Very Likely Science (100)
cran: rcdk
Interface to the 'CDK' Libraries
Papers that mentioned: 30
Very Likely Science (75)
cran: Rcpp
Seamless R and C++ Integration
Papers that mentioned: 152
Very Likely Science (100)
cran: roxygen2
In-Line Documentation for R
Papers that mentioned: 14
Very Likely Science (100)
cran: RSQLite
SQLite Interface for R
Papers that mentioned: 27
Very Likely Science (100)
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
Very Likely Science (100)
cran: VennDiagram
Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626
Very Likely Science (83)
cran: visNetwork
Network Visualization using 'vis.js' Library
Papers that mentioned: 49
Very Likely Science (100)
pypi: Archive
Simple library that provides a common interface for extracting zip and tar archives.
Papers that mentioned: 363
Very Likely Science (65)
pypi: DataAnalysis
Pacote de pré-processamento de texto
Papers that mentioned: 493
Very Likely Science (65)
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
Very Likely Science (100)
pypi: plot
A matplotlib frontend executable using JSON file as user input
Papers that mentioned: 63
Very Likely Science (65)