pypi: stats | Projects | Ecosyste.ms: Papers

10.1038/s41598-017-13397-x

The effect of insecticide synergist treatment on genome-wide gene expression in a polyphagous pest
Cited by: 28
Author(s): Simon Snoeck, Robert Greenhalgh, Luc Tirry, Richard M. Clark, Thomas Van Leeuwen, Wannes Dermauw
Software Mentions: 7
Published: about 8 years ago

10.1186/s13148-018-0510-3

Multifactorial analysis of the stochastic epigenetic variability in cord blood confirmed an impact of common behavioral and environmental factors but not of in vitro conception
Cited by: 25
Author(s): Davide Gentilini, Edgardo Somigliana, Luca Pagliardini, Elisa Rabellotti, Paolo Garagnani, Luisa Bernardinelli, Enrico Papaleo, Massimo Candiani, Anna Maria Di Blasio, Paola Viganò
Software Mentions: 7
Published: over 7 years ago

10.3390/v13040550

Spatial Analysis of the 2017 Outbreak of Hemorrhagic Disease and Physiographic Region in the Eastern United States
Cited by: 7
Author(s): Christine L Casey, Stephen L. Rathbun, David E. Stallknecht, Mark G. Ruder
Software Mentions: 7
Published: over 4 years ago

10.1038/s41598-020-77578-x

Empty mesoporous silica particles significantly delay disease progression and extend survival in a mouse model of ALS
Cited by: 7
Author(s): Marcel F. Leyton-Jaimes, Patrik Ivert, Jan Hoeber, Yilin Han, Adam Feiler, Chunfang Zhou, Stanislava Pankratova, Varda Shoshan‐Barmatz, Adrian Israelson, Elena N. Kozlova
Software Mentions: 7
Published: almost 5 years ago

10.1186/s12874-019-0681-4

Machine learning in medicine: a practical introduction
Cited by: 526
Author(s): Jenni A. M. Sidey-Gibbons, Chris Sidey‐Gibbons
Software Mentions: 7
Published: over 6 years ago

10.3390/microorganisms8101528

Metabolic Response of Faecalibacterium prausnitzii to Cell-Free Supernatants from Lactic Acid Bacteria
Cited by: 14
Author(s): Mathilde Lebas, Peggy Garault, Daniel Carrillo, Francisco M. Codoñer, Muriel Derrien
Software Mentions: 7
Published: about 5 years ago

10.3390/insects11120828

Local and Landscape Effects on Carrion-Associated Rove Beetle (Coleoptera: Staphylinidae) Communities in German Forests
Cited by: 7
Author(s): Sandra Weithmann, Jonas Kuppler, Gregor Degasperi, Sandra Steiger, Manfred Ayasse, Christian von Hoermann
Software Mentions: 7
Published: almost 5 years ago

10.3390/insects12020089

Direct and Indirect Effect via Endophytism of Entomopathogenic Fungi on the Fitness of Myzus persicae and Its Ability to Spread PLRV on Tobacco
Cited by: 3
Author(s): Junior Corneille Fingu Mabola, Thomas Bawin, Frédéric Francis
Software Mentions: 7
Published: almost 5 years ago

10.3390/insects12050388

Designing Aedes (Diptera: Culicidae) Mosquito Traps: The Evolution of the Male Aedes Sound Trap by Iterative Evaluation
Cited by: 3
Author(s): Kyran M. Staunton, Jianyi Liu, Michael Townsend, Mark Desnoyer, Paul Howell, Jacob E. Crawford, Xiang Wang, Nigel Snoad, Thomas R. Burkot, Scott A. Ritchie
Software Mentions: 7
Published: over 4 years ago

10.3390/insects11090553

Structure of the Assemblages of Spiders in Mediterranean Pear Orchards and the Effect of Intensity of Spraying
Cited by: 3
Author(s): Luis de Pedro, María Carmen Ortín-Angulo, J. Miñano, Elena López‐Gallego, J. Sánchez
Software Mentions: 7
Published: about 5 years ago

10.1016/j.celrep.2019.12.057

Cohesin Disrupts Polycomb-Dependent Chromosome Interactions in Embryonic Stem Cells
Cited by: 118
Author(s): James Rhodes, Angelika Feldmann, Benjamín Hernández-Rodríguez, Noèlia Díaz, Jill M. Brown, Nadezda A. Fursova, Neil P. Blackledge, Praveen Prathapan, Paula Dobrinić, Miles K. Huseyin, Aleksander Szczurek, Kai Kruse, K Nasmyth, Veronica J. Buckle, Juan M. Vaquerizas, Robert J. Klose
Software Mentions: 7
Published: almost 6 years ago

10.1038/s41420-021-00451-x

A novel defined pyroptosis-related gene signature for predicting the prognosis of ovarian cancer
Cited by: 256
Author(s): Ying Yang, Qinjin Dai, Hongbo Qi
Software Mentions: 7
Published: over 4 years ago

10.1080/19490976.2021.1921927

Fecal microbiota composition associates with the capacity of human peripheral blood monocytes to differentiate into immunogenic dendritic cells <i>in vitro</i>
Cited by: 7
Author(s): Dušan Radojević, Sergej Tomić, Dušan Mihajlović, Maja Tolinački, Bojan Pavlović, Dragana Vučević, Svetlana Bojić, Nataša Golić, Miodrag Čolić, Jelena Đokić
Software Mentions: 7
Published: almost 5 years ago

10.1016/j.heliyon.2020.e03549

Trends in the occurrence of large Whooping Crane groups during migration in the great plains, USA
Cited by: 4
Author(s): Andrew J. Caven, Matt Rabbe, Jenna Malzahn, Anne E. Lacy
Software Mentions: 7
Published: over 5 years ago

10.1186/s12859-015-0830-7

DHOEM: a statistical simulation software for simulating new markers in real SNP marker data
Cited by: 0
Author(s): Laval Jacquin, Tuong-Vi Cao, Cécile Grenier, Nourollah Ahmadi
Software Mentions: 7
Published: almost 10 years ago

10.1186/s12859-020-03945-0

mixIndependR: a R package for statistical independence testing of loci in database of multi-locus genotypes
Cited by: 1
Author(s): Bing Song, August E. Woerner, John V. Planz
Software Mentions: 7
Published: almost 5 years ago

10.1186/s13148-019-0651-z

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression
Cited by: 18
Author(s): Shivani Kamdar, Ruth Isserlin, Theodorus van der Kwast, Alexandre R. Zlotta, Gary D. Bader, Neil Fleshner, Bharati Bapat
Software Mentions: 7
Published: over 6 years ago

10.1001/jamanetworkopen.2021.21129

Assessment of the Diagnostic Efficiency of a Liquid Biopsy Assay for Early Detection of Gastric Cancer
Cited by: 15
Author(s): Daisuke Izumi, Zhenzhen Zhu, Yuetong Chen, Shusuke Toden, Xinying Huo, Mitsuro Kanda, Takatsugu Ishimoto, Dongying Gu, Miaomiao Tan, Yasuhiro Kodera, Hideo Baba, Wei Li, Jinfei Chen, Xin Wang, Ajay Goel
Software Mentions: 7
Published: about 4 years ago

10.1186/s12864-019-6162-7

Transcriptome analysis of the differential effect of the NADPH oxidase gene RbohB in Phaseolus vulgaris roots following Rhizobium tropici and Rhizophagus irregularis inoculation
Cited by: 11
Author(s): Citlali Fonseca-García, Alejandra E. Zayas, Jesús Montiel, Noreide Nava, Federico Sánchez, Carmen Quinto
Software Mentions: 7
Published: almost 6 years ago

10.1093/gigascience/giaa135

Dadasnake, a Snakemake implementation of DADA2 to process amplicon sequencing data for microbial ecology
Cited by: 33
Author(s): Christina Weißbecker, Beatrix Schnabel, Anna Heintz‐Buschart
Software Mentions: 7
Published: almost 5 years ago

10.1371/journal.pone.0076051

Alterations in miRNA Levels in the Dentate Gyrus in Epileptic Rats
Cited by: 79
Author(s): Anna Bot, Konrad J. Dębski, Katarzyna Łukasiuk
Software Mentions: 7
Published: about 12 years ago

10.1371/journal.pgen.1004900

An Intracellular Transcriptomic Atlas of the Giant Coenocyte Caulerpa taxifolia
Cited by: 41
Author(s): Aashish Ranjan, Brad T. Townsley, Yasunori Ichihashi, Neelima Sinha, Daniel H. Chitwood
Software Mentions: 7
Published: almost 11 years ago

10.1371/journal.pone.0167265

Evidence of Facilitation Cascade Processes as Drivers of Successional Patterns of Ecosystem Engineers at the Upper Altitudinal Limit of the Dry Puna
Cited by: 13
Author(s): Luca Malatesta, Federico Maria Tardella, Karina Piermarteri, Andrea Catorci
Software Mentions: 7
Published: almost 9 years ago

10.1186/s13059-020-01992-7

TADsplimer reveals splits and mergers of topologically associating domains for epigenetic regulation of transcription
Cited by: 5
Author(s): Guangyu Wang, Qingshu Meng, Bo Xia, Shuo Zhang, Jie Lv, Dongyu Zhao, Yanqiang Li, Xin Wang, Lili Zhang, John P. Cooke, Qi Cao, Kaifu Chen
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0104705

Laurentian Great Lakes Phytoplankton and Their Water Quality Characteristics, Including a Diatom-Based Model for Paleoreconstruction of Phosphorus
Cited by: 37
Author(s): Euan D. Reavie, Adam J. Heathcote, Victoria L. Shaw Chraïbi
Software Mentions: 7
Published: about 11 years ago

10.18632/aging.101356

A hypothesis-driven approach identifies CDK4 and CDK6 inhibitors as candidate drugs for treatments of adrenocortical carcinomas
Cited by: 22
Author(s): Djihad Hadjadj, Su-Jung Kim, Thomas Denecker, Laura Ben Driss, Jean‐Charles Cadoret, Chrystelle Maric, Giuseppe Baldacci, Fabien Fauchereau
Software Mentions: 7
Published: almost 8 years ago

10.1371/journal.pone.0253779

Altered states phenomena induced by visual flicker light stimulation
Cited by: 7
Author(s): Marie Therese Bartossek, Johanna Kemmerer, Timo Torsten Schmidt
Software Mentions: 7
Published: over 4 years ago

10.1534/g3.117.300479

Multivariate Analysis of the Cotton Seed Ionome Reveals a Shared Genetic Architecture
Cited by: 13
Author(s): Duke Pauli, Gregory R. Ziegler, Min Ren, Matthew A. Jenks, Douglas J. Hunsaker, Min Zhang, Ivan Baxter, Michael A. Gore
Software Mentions: 7
Published: over 7 years ago

10.3390/brainsci11020231

Infant Eye Gaze While Viewing Dynamic Faces
Cited by: 5
Author(s): Lisa M. Oakes, Michaela C. DeBolt, Aaron G. Beckner, Annika T. Voss, Lisa Cantrell
Software Mentions: 7
Published: over 4 years ago

10.1186/s12983-019-0309-x

Mining morphometrics and age from past survey photographs
Cited by: 3
Author(s): Caitlin Black, Hannah S. Mumby, Michelle Henley
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pcbi.1004765

A Multi-Method Approach for Proteomic Network Inference in 11 Human Cancers
Cited by: 29
Author(s): Yasin Şenbabaoğlu, S. Onur Sumer, Francisco Sánchez-Vega, Debra L. Bemis, Giovanni Ciriello, Nikolaus Schultz, Chris Sander
Software Mentions: 7
Published: over 9 years ago

10.3389/fnsys.2021.692152

Age-Related Variations in Regional White Matter Volumetry and Microstructure During the Post-adolescence Period: A Cross-Sectional Study of a Cohort of 1,713 University Students
Cited by: 4
Author(s): Ami Tsuchida, Alexandre Laurent, Fabrice Crivello, Laurent Petit, Antonietta Pepe, Naka Beguedou, Stéphanie Debette, Christophe Tzourio, Bernard Mazoyer
Software Mentions: 7
Published: over 4 years ago

10.3389/fvets.2019.00499

Developing Diagnostic Frameworks in Veterinary Behavioral Medicine: Disambiguating Separation Related Problems in Dogs
Cited by: 25
Author(s): Luciana Santos de Assis, Raquel Matos, Thomas W. Pike, Ohp Burman, Daniel S. Mills
Software Mentions: 7
Published: almost 6 years ago

10.1186/s40104-019-0393-y

Efficacy of medium-chain fatty acid salts distilled from coconut oil against two enteric pathogen challenges in weanling piglets
Cited by: 23
Author(s): Paola López-Colom, Lorena Castillejos, Agustina Rodríguez-Sorrento, Mónica Puyalto, J. J. Mallo, S. M. Martín‐Orúe
Software Mentions: 7
Published: almost 6 years ago

10.3389/fgene.2021.702695

Identification and Elucidation of the Protective isomiRs in Lung Cancer Patient Prognosis
Cited by: 1
Author(s): Fu-Mei Hsieh, Su-Ting Lai, Ming-Fong Wu, Chen-Ching Lin
Software Mentions: 7
Published: about 4 years ago

10.1186/s12864-017-3683-9

Reduced changes in protein compared to mRNA levels across non-proliferating tissues
Cited by: 72
Author(s): Kobi Perl, Kathy Ushakov, Yair Pozniak, Ofer Yizhar-Barnea, Yoni Bhonker, Shaked Shivatzki, Tamar Geiger, Karen B. Avraham, Ron Shamir
Software Mentions: 6
Published: over 8 years ago

10.3389/fpsyg.2020.00905

From Abstract Symbols to Emotional (In-)Sights: An Eye Tracking Study on the Effects of Emotional Vignettes and Pictures
Cited by: 5
Author(s): Franziska Usée, Arthur Jacobs, Jana Lüdtke
Software Mentions: 6
Published: over 5 years ago

10.1186/s12864-016-3020-8

RNA-Seq analysis of seasonal and individual variation in blood transcriptomes of healthy managed bottlenose dolphins
Cited by: 27
Author(s): Jeanine S. Morey, Marion G. Neely, Denise Lunardi, Paul E. Anderson, Lori H. Schwacke, Michelle R. Campbell, Frances M. Van Dolah
Software Mentions: 6
Published: about 9 years ago

10.1186/s12864-019-6061-y

Mitochondrial genomic variation drives differential nuclear gene expression in discrete regions of Drosophila gene and protein interaction networks
Cited by: 12
Author(s): Jim A. Mossman, Leann M. Biancani, David M. Rand
Software Mentions: 6
Published: about 6 years ago

10.3389/fpls.2018.00599

Landscape- and Local-Scale Actions Are Essential to Conserve Regional Macrophyte Biodiversity
Cited by: 4
Author(s): Munemitsu Akasaka, Shinsuke Higuchi, Noriko Takamura
Software Mentions: 6
Published: over 7 years ago

10.1371/journal.pone.0099926

Insights from Computational Modeling in Inflammation and Acute Rejection in Limb Transplantation
Cited by: 23
Author(s): Dolores Wolfram, Ravi Starzl, Hubert Hackl, Derek Barclay, Theresa Hautz, Bettina Zelger, Gerald Brandacher, W. P. Andrew Lee, Nadine Eberhart, Yoram Vodovotz, Johann Pratschke, Gerhard Pierer, Stefan Schneeberger
Software Mentions: 6
Published: over 11 years ago

10.3389/fmicb.2016.00399

Associations between Ectomycorrhizal Fungi and Bacterial Needle Endophytes in Pinus radiata: Implications for Biotic Selection of Microbial Communities
Cited by: 21
Author(s): Megan A. Rúa, Emily Wilson, S. D. Steele, Arielle R. Munters, Jason D. Hoeksema, A. Carolin Frank
Software Mentions: 6
Published: over 9 years ago

10.3390/ani10111985

Is Whip Use Important to Thoroughbred Racing Integrity? What Stewards’ Reports Reveal about Fairness to Punters, Jockeys and Horses
Cited by: 8
Author(s): Kirrilly Thompson, Phil McManus, Dene Stansall, Bethany Wilson, Paul D. McGreevy
Software Mentions: 6
Published: about 5 years ago

10.3389/fpls.2020.00054

Winter Wheat Yield Response to Plant Density as a Function of Yield Environment and Tillering Potential: A Review and Field Studies
Cited by: 58
Author(s): Leonardo M. Bastos, Walter D. Carciochi, Romulo P. Lollato, B. R. Jaenisch, Caio R Rezende, Raíssa Schwalbert, P. V. Vara Prasad, Guorong Zhang, Allan K. Fritz, Chris Foster, Yancy Wright, S. Emory Young, Pauley R. Bradley, Ignacio A. Ciampitti
Software Mentions: 6
Published: over 5 years ago

10.3389/fmicb.2016.02064

Soil Microbiome Is More Heterogeneous in Organic Than in Conventional Farming System
Cited by: 177
Author(s): Manoeli Lupatini, G.W. Korthals, Mattias de Hollander, Thierry Janssens, Eiko E. Kuramae
Software Mentions: 6
Published: almost 9 years ago

10.1155/2021/6635526

Construction and Validation of a Ferroptosis-Related Prognostic Model for Gastric Cancer
Cited by: 33
Author(s): Xiaotao Jiang, Qiaofeng Yan, Linling Xie, Shiqi Xu, Kailin Jiang, Jiahua Huang, Yi Wen, Yanhua Yan, Junhui Zheng, Shiyun Tang, Kechao Nie, Zhihua Zheng, Jinglin Pan, Peng Liu, Yuancheng Huang, Xingrui Yan, Yushan Zou, Xuan Chen, Fengbin Liu, Peiwu Li, Kunhai Zhuang
Software Mentions: 6
Published: over 4 years ago

10.1016/j.lanepe.2021.100103

Impact of the COVID-19 pandemic and associated non-pharmaceutical interventions on other notifiable infectious diseases in Germany: An analysis of national surveillance data during week 1–2016 – week 32–2020
Cited by: 86
Author(s): Alexander Ullrich, Madlen Schranz, Ute Rexroth, Osamah Hamouda, Lars Schaade, Michaela Diercke, T. Sonia Boender
Software Mentions: 6
Published: over 4 years ago

10.2196/20185

Mental Health and Behavior of College Students During the Early Phases of the COVID-19 Pandemic: Longitudinal Smartphone and Ecological Momentary Assessment Study
Cited by: 443
Author(s): Jeremy F. Huckins, Alex W DaSilva, Weichen Wang, Elin Hedlund, Courtney Rogers, Subigya Nepal, Jialing Wu, Mikio Obuchi, Eilis I Murphy, Meghan L. Meyer, Dylan D. Wagner, Paul E. Holtzheimer, Andrew T. Campbell
Software Mentions: 6
Published: over 5 years ago

10.1016/j.isci.2021.102452

Scaling relation between genome length and particle size of viruses provides insights into viral life history
Cited by: 8
Author(s): Harshali V. Chaudhari, Mandar M. Inamdar, Kiran Kondabagil
Software Mentions: 6
Published: over 4 years ago

10.34133/2020/1925495

Soybean Root System Architecture Trait Study through Genotypic, Phenotypic, and Shape-Based Clusters
Cited by: 30
Author(s): Kevin G. Falk, Talukder Z. Jubery, Jamie A. O’Rourke, Arti Singh, Soumik Sarkar, Baskar Ganapathysubramanian
Software Mentions: 6
Published: almost 6 years ago

10.1371/journal.pone.0055674

Utilizing Descriptive Statements from the Biodiversity Heritage Library to Expand the Hymenoptera Anatomy Ontology
Cited by: 9
Author(s): Katja C. Seltmann, Zsolt Pénzes, Matthew Yoder, Matthew A. Bertone, Andrew R. Deans
Software Mentions: 6
Published: over 12 years ago

10.3389/fmicb.2020.594890

Soil Organic Carbon Attenuates the Influence of Plants on Root-Associated Bacterial Community
Cited by: 6
Author(s): Zhihui Yang, Qing Yao, Honghui Zhu
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0246663

An open-sourced, web-based application to analyze weekly excess mortality based on the Short-term Mortality Fluctuations data series
Cited by: 38
Author(s): László Németh, Dmitri A. Jdanov, Vladimir M. Shkolnikov
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0090898

Reduced-Gliadin Wheat Bread: An Alternative to the Gluten-Free Diet for Consumers Suffering Gluten-Related Pathologies
Cited by: 79
Author(s): Javier Gil-Humanes, Fernando Pistón, Rossana Altamirano-Fortoul, Ana Real, Isabel Comino, Carolina Sousa, Cristina M. Rosell, Francisco Barro
Software Mentions: 6
Published: over 11 years ago

10.3390/ani10010113

Exploring the Use of a Qualitative Behavioural Assessment Approach to Assess Emotional State of Calves in Rodeos
Cited by: 6
Author(s): Sally Rizzuto, Di Evans, Bethany Wilson, Paul D. McGreevy
Software Mentions: 6
Published: almost 6 years ago

10.1371/journal.pone.0179180

Rigid geometry solves “curse of dimensionality” effects in clustering methods: An application to omics data
Cited by: 12
Author(s): Shun Adachi
Software Mentions: 6
Published: over 8 years ago

10.1186/s12859-016-1083-9

flowVS: channel-specific variance stabilization in flow cytometry
Cited by: 15
Author(s): Ariful Azad, Bartek Rajwa, Alex Pothen
Software Mentions: 6
Published: over 9 years ago

10.1371/journal.pone.0210236

Clustering algorithms: A comparative approach
Cited by: 275
Author(s): Mayra Z. Rodriguez, César H. Comin, Dalcimar Casanova, Odemir Martinez Bruno, Diego R. Amancio, Luciano da Fontoura Costa, Francisco A. Rodrigues
Software Mentions: 6
Published: almost 7 years ago

10.1186/s12864-019-5453-3

Genome-wide signatures of local adaptation among seven stoneflies species along a nationwide latitudinal gradient in Japan
Cited by: 15
Author(s): Maribet Gamboa, Kozo Watanabe
Software Mentions: 6
Published: almost 7 years ago

10.3389/fmicb.2021.675693

Nitrogen Fertilization and Native C4 Grass Species Alter Abundance, Activity, and Diversity of Soil Diazotrophic Communities
Cited by: 10
Author(s): Jialin Hu, Jonathan D. Richwine, Patrick D. Keyser, Lidong Li, Fei Yao, Sindhu Jagadamma, Jennifer M. DeBruyn
Software Mentions: 6
Published: over 4 years ago

10.18632/oncotarget.10962

Epigenetic reprogramming and aberrant expression of PRAME are associated with increased metastatic risk in Class 1 and Class 2 uveal melanomas
Cited by: 85
Author(s): Matthew G. Field, Michael A. Durante, Christina L. Decatur, Berçin Tarlan, Kristen M. Oelschlager, John F. Stone, Jeffim N. Kuznetsov, Anne M. Bowcock, Stefan Kurtenbach, J. William Harbour
Software Mentions: 6
Published: over 9 years ago

10.3390/microorganisms8081225

Lactobacillus Mucosae Strain Promoted by a High-Fiber Diet in Genetic Obese Child Alleviates Lipid Metabolism and Modifies Gut Microbiota in ApoE-/- Mice on a Western Diet
Cited by: 19
Author(s): Tianyi Jiang, Huan Wu, Xin Yang, Yue Li, Ziyi Zhang, Feng Chen, Liping Zhao, Chenhong Zhang
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2019.00974

Identifying the Growth Modulon of Corynebacterium glutamicum
Cited by: 8
Author(s): Thorsten Haas, Michaela Graf, Alexander Nieß, Tobias Busche, Jörn Kalinowski, Bastian Blombach, Ralf Takors
Software Mentions: 6
Published: over 6 years ago

10.7554/eLife.39209

Reconstructing the functions of endosymbiotic Mollicutes in fungus-growing ants
Cited by: 34
Author(s): Panagiotis Sapountzis, Mariya Zhukova, Jonathan Z. Shik, Morten Schiøtt, Jacobus J. Boomsma
Software Mentions: 6
Published: almost 7 years ago

10.7554/eLife.66398

Tetrahydroxanthohumol, a xanthohumol derivative, attenuates high-fat diet-induced hepatic steatosis by antagonizing PPARγ
Cited by: 7
Author(s): Yang Zhang, Gerd Bobe, Cristobal L. Miranda, Malcolm B. Lowry, Victor L. Hsu, Christiane V. Löhr, Carmen P. Wong, Donald Β. Jump, Matthew M. Robinson, Thomas J. Sharpton, Claudia S. Maier, Jan F. Stevens, Adrian F. Gombart
Software Mentions: 6
Published: over 4 years ago

10.3389/fmicb.2018.02868

Comparison of Bacterial Diversity in Air and Water of a Major Urban Center
Cited by: 24
Author(s): M. Elias Dueker, Shaya Regina French, Gregory D. O’Mullan
Software Mentions: 6
Published: almost 7 years ago

10.7717/peerj.12135

Biogeography rather than substrate type determines bacterial colonization dynamics of marine plastics
Cited by: 9
Author(s): Ashley K. Coons, Kathrin Busch, Mark Lenz, Ute Hentschel, Erik Borchert
Software Mentions: 6
Published: about 4 years ago

10.7554/eLife.23361

A chloroplast retrograde signal, 3’-phosphoadenosine 5’-phosphate, acts as a secondary messenger in abscisic acid signaling in stomatal closure and germination
Cited by: 116
Author(s): Wannarat Pornsiriwong, Gonzalo M. Estavillo, Kai Xun Chan, Estee E-Ling Tee, Diep R Ganguly, Peter A. Crisp, Su Yin Phua, Chenchen Zhao, Jiaen Qiu, Jiyoung Park, Miing Tiem Yong, Nazia Nisar, Arun Kumar Yadav, Benjamin Schwessinger, John P. Rathjen, Christopher I. Cazzonelli, Philippa B. Wilson, Matthew Gilliham, Zhong‐Hua Chen, Barry J. Pogson
Software Mentions: 6
Published: over 8 years ago

10.1186/1471-2105-15-138

An R package that automatically collects and archives details for reproducible computing
Cited by: 15
Author(s): Zhifa Liu, Stanley Pounds
Software Mentions: 6
Published: over 11 years ago

10.3389/fimmu.2017.00246

Host Genetic Background Strongly Affects Pulmonary microRNA Expression before and during Influenza A Virus Infection
Cited by: 19
Author(s): Matthias Preuße, Klaus Schughart, Frank Peßler
Software Mentions: 6
Published: over 8 years ago

10.3389/fimmu.2020.00851

Gene Expression Profiling of PDGFRA Mutant GIST Reveals Immune Signatures as a Specific Fingerprint of D842V Exon 18 Mutation
Cited by: 10
Author(s): Valentina Indio, Gloria Ravegnini, Annalisa Astolfi, Milena Urbini, Maristella Saponara, Antonio De Leo, Elisa Gruppioni, Giuseppe Tarantino, Sabrina Angelini, Andrea Pession, Maria Abbondanza Pantaleo, Margherita Nannini
Software Mentions: 6
Published: over 5 years ago

10.3389/fgene.2021.698040

Identification of a Ferroptosis Gene Set That Mediates the Prognosis of Squamous Cell Carcinoma of the Head and Neck
Cited by: 1
Author(s): Chunyan Li, Xuemin Wang, Rujia Qin, Zhaoming Zhong, Chuanzheng Sun
Software Mentions: 6
Published: about 4 years ago

10.1186/s12859-021-04339-6

Predicting chemotherapy response using a variational autoencoder approach
Cited by: 7
Author(s): Qi Wei, Stephen A. Ramsey
Software Mentions: 6
Published: about 4 years ago

10.3390/biomedicines9020206

Zoom in on Antibody Aggregates: A Potential Pitfall in the Search of Rare EV Populations
Cited by: 1
Author(s): Rikke Wehner Rasmussen, Jaco Botha, Frederik Prip, Mathilde Sanden, Mads Nielsen, Aase Handberg
Software Mentions: 6
Published: over 4 years ago

10.3389/fgene.2020.565626

A Near-Chromosome Level Genome Assembly of Anopheles stephensi
Cited by: 14
Author(s): Afiya Razia Chida, Samathmika Ravi, Suvratha Jayaprasad, Kiran Paul, Jaysmita Saha, Chinjusha Suresh, Saurabh Whadgar, Naveen Kumar, Raksha Rao K, Chaitali Ghosh, Bibha Choudhary, Suresh Subramani, Subhashini Srinivasan
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0196130

Aridity drives plant biogeographical sub regions in the Caatinga, the largest tropical dry forest and woodland block in South America
Cited by: 51
Author(s): Augusto C. Silva, Alexandre F. Souza
Software Mentions: 6
Published: over 7 years ago

10.3390/ijerph18168656

Traditional Gender Differences Create Gaps in the Effect of COVID-19 on Psychological Distress of Japanese Workers
Cited by: 10
Author(s): Tomoyuki Kobayashi, Masaharu Maeda, Yui Takebayashi, Hideki Sato
Software Mentions: 6
Published: about 4 years ago

10.3389/fgene.2021.716623

Deep Sequencing of MHC-Adapted Viral Lines Reveals Complex Recombinational Exchanges With Endogenous Retroviruses Leading to High-Frequency Variants
Cited by: 1
Author(s): Earl Middlebrook, Derek L. Stark, Douglas H. Cornwall, Jason L. Kubinak, Wayne K. Potts
Software Mentions: 6
Published: about 4 years ago

10.1038/s41598-021-88005-0

Division of labor in work shifts by leaf-cutting ants
Cited by: 0
Author(s): Pedro B. Constantino, Verónica Sandra Valentinuzzi, André Frazão Helene
Software Mentions: 6
Published: over 4 years ago

10.3389/fgene.2020.615012

Genetic Background Shapes Phenotypic Response to Diet for Adiposity in the Collaborative Cross
Cited by: 7
Author(s): Phoebe Yam, Jody Albright, Melissa VerHague, Erik Gertz, Fernando Pardo-Manuel de Villena, Brian J. Bennett
Software Mentions: 6
Published: over 4 years ago

10.1038/s41598-021-87384-8

Field multi-omics analysis reveals a close association between bacterial communities and mineral properties in the soybean rhizosphere
Cited by: 11
Author(s): Shinichi Yamazaki, Hossein Mardani-Korrani, Rumi Kaida, Kumiko Ochiai, Masaru Kobayashi, Atsushi J. Nagano, Yoshiharu Fujii, Akifumi Sugiyama, Yosuke Aoki
Software Mentions: 6
Published: over 4 years ago

10.1038/s41598-021-81933-x

Cell type-specific changes in transcriptomic profiles of endothelial cells, iPSC-derived neurons and astrocytes cultured on microfluidic chips
Cited by: 15
Author(s): Heleen H.T. Middelkamp, Anouk H.A. Verboven, Aisen Vivas, Chantal Schoenmaker, Teun Klein Gunnewiek, Robert Passier, Cornelis A. Albers, Peter-Bram A.C. ’t Hoen, Nael Nadif Kasri, Andries D. van der Meer
Software Mentions: 6
Published: almost 5 years ago

10.1186/s13075-020-02403-9

Association study between immune-related miRNAs and mixed connective tissue disease
Cited by: 1
Author(s): Barbara Stypińska, Aleksandra Lewandowska, Anna Felis-Giemza, Marzena Olesińska, Agnieszka Paradowska‐Gorycka
Software Mentions: 6
Published: almost 5 years ago

10.3389/fcimb.2018.00020

Genetic Separation of Listeria monocytogenes Causing Central Nervous System Infections in Animals
Cited by: 20
Author(s): Lisandra Aguilar-Bultet, Pamela Nicholson, Lorenz Rychener, Margaux Dreyer, Bulent Gözel, Francesco C. Origgi, Anna Oevermann, Joachim Frey, Laurent Falquet
Software Mentions: 6
Published: over 7 years ago

10.1038/s41598-021-87436-z

Reproductive performance in houbara bustard is affected by the combined effects of age, inbreeding and number of generations in captivity
Cited by: 4
Author(s): Robin Rabier, Loïc Lesobre, Alexandre Robert
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0232648

Climatic drivers of Verticillium dahliae occurrence in Mediterranean olive-growing areas of southern Spain
Cited by: 1
Author(s): Juan M. Requena‐Mullor, José Manuel Garcı́a-Garrido, Pilar Garcı́a Garcı́a, Estefanı́a Rodrı́guez
Software Mentions: 6
Published: almost 5 years ago

10.1186/s13062-017-0193-2

On the global CRISPR array behavior in class I systems
Cited by: 11
Author(s): Alice Toms, Rodolphe Barrangou
Software Mentions: 6
Published: about 8 years ago

10.3389/fpsyg.2019.00031

A Tendency Towards Details? Inconsistent Results on Auditory and Visual Local-To-Global Processing in Absolute Pitch Musicians
Cited by: 9
Author(s): Teresa Wenhart, Eckart Altenmüller
Software Mentions: 6
Published: almost 7 years ago

10.7717/peerj.6597

Phylogenetic signal analysis in the basicranium of Ursidae (Carnivora, Mammalia)
Cited by: 6
Author(s): María Eugenia Arnaudo, Néstor Toledo, Leopoldo Héctor Soibelzon, Paula Bona
Software Mentions: 6
Published: over 6 years ago

10.1002/evl3.80

Lineages evolved under stronger sexual selection show superior ability to invade conspecific competitor populations
Cited by: 10
Author(s): Joanne L. Godwin, Lewis G. Spurgin, Łukasz Michalczyk, Oliver Y. Martin, Alyson J. Lumley, Tracey Chapman, Matthew J. G. Gage
Software Mentions: 6
Published: about 7 years ago

10.1002/evl3.13

Experimental evolution reveals that sperm competition intensity selects for longer, more costly sperm
Cited by: 44
Author(s): Joanne L. Godwin, Ramakrishnan Vasudeva, Łukasz Michalczyk, Oliver Y. Martin, Alyson J. Lumley, Tracey Chapman, Matthew J. G. Gage
Software Mentions: 6
Published: over 8 years ago

10.1371/journal.pone.0233872

Alpha-, beta-, and gamma-diversity of bacteria varies across habitats
Cited by: 83
Author(s): Kendra E. Walters, Jennifer B. H. Martiny
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0251653

Minimally invasive brain injections for viral-mediated transgenesis: New tools for behavioral genetics in sticklebacks
Cited by: 2
Author(s): Noelle James, Alison M. Bell
Software Mentions: 6
Published: over 4 years ago

10.1111/eva.12643

Fitness costs of key point mutations that underlie acaricide target‐site resistance in the two‐spotted spider mite <i>Tetranychus urticae</i>
Cited by: 38
Author(s): Sabina Bajda, Maria Riga, Nicky Wybouw, Stavrini Papadaki, Eleni Ouranou, Seyedeh Masoumeh Fotoukkiaii, John Vontas, Thomas Van Leeuwen
Software Mentions: 6
Published: over 7 years ago

10.1038/s41598-020-80782-4

Individual fate and gut microbiome composition in the European wild rabbit (Oryctolagus cuniculus)
Cited by: 12
Author(s): Gerard Funosas, Xavier Triadó‐Margarit, Francisca Castro, Rafael Villafuerte, Miguel Delibes‐Mateos, Carlos Rouco, Emilio O. Casamayor
Software Mentions: 6
Published: almost 5 years ago

10.1111/1556-4029.14482

Getting Rid of Dichotomous Sex Estimations: Why Logistic Regression Should be Preferred Over Discriminant Function Analysis
Cited by: 13
Author(s): Björn Bartholdy, Elena Sandoval, Menno L. P. Hoogland, Sarah Schrader
Software Mentions: 6
Published: over 5 years ago

10.1038/s41426-018-0204-0

A viral race for primacy: co-infection of a natural pair of low and highly pathogenic H7N7 avian influenza viruses in chickens and embryonated chicken eggs
Cited by: 19
Author(s): Annika Graaf, Reiner Ulrich, Pavlo Maksimov, David Scheibner, Susanne Koethe, Elsayed M. Abdelwhab, Thomas C. Mettenleiter, Martin Beer, Timm Harder
Software Mentions: 6
Published: almost 7 years ago

10.1186/s12862-020-01645-0

What makes a fang? Phylogenetic and ecological controls on tooth evolution in rear-fanged snakes
Cited by: 20
Author(s): Erin P. Westeen, Andrew M. Durso, Michael C. Gründler, Daniel L. Rabosky, Alison R. Davis Rabosky
Software Mentions: 6
Published: over 5 years ago

10.7717/peerj.11119

Commercial arbuscular mycorrhizal fungal inoculant failed to establish in a vineyard despite priority advantage
Cited by: 12
Author(s): Corrina Thomsen, Laura Loverock, Vasilis Kokkoris, Taylor Holland, Pat Bowen, Miranda M. Hart
Software Mentions: 6
Published: over 4 years ago

10.7717/peerj.9209

Estimating food resource availability in arid environments with Sentinel 2 satellite imagery
Cited by: 4
Author(s): Caterina Funghi, René H. J. Heim, Wiebke Schuett, Simon C. Griffith, Jens Oldeland
Software Mentions: 6
Published: over 5 years ago

Projects: pypi: stats

Science Score: 90/100

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Papers Mentioning stats 3,105