Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1004765

https://doi.org/10.1371/journal.pcbi.1004765

A Multi-Method Approach for Proteomic Network Inference in 11 Human Cancers

Cited by: 29
Author(s): Yasin Şenbabaoğlu, S. Onur Sumer, Francisco Sánchez-Vega, Debra L. Bemis, Giovanni Ciriello, Nikolaus Schultz, Chris Sander
Published: over 8 years ago

Software Mentions 7

cran: GeneNet

Modeling and Inferring Gene Networks
Papers that mentioned: 87

cran: glasso

Graphical Lasso: Estimation of Gaussian Graphical Models
Papers that mentioned: 39

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: parmigene

Parallel Mutual Information Estimation for Gene Network Reconstruction
Papers that mentioned: 16

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: Pathway

Pathway is a data processing framework which takes care of streaming data updates for you.
Papers that mentioned: 827

pypi: stats

Calculator-style statistical functions
Papers that mentioned: 3,105