pypi: numpy | Projects | Ecosyste.ms: Papers

10.1186/s12967-019-1783-9

Mathematical models of amino acid panel for assisting diagnosis of children acute leukemia
Cited by: 9
Author(s): Zhi-Dai Liu, Tingting Zhou, Xing Han, Tingyuan Lang, Shan Liu, Penghui Zhang, Haiyan Liu, Ke-Xing Wan, Jianhua Yu, Liang Zhang, Liyan Chen, Roger W. Beuerman, Bin Peng, Lei Zhou, Lin Zou
Software Mentions: 5
Published: almost 6 years ago

10.1038/sdata.2018.280

A global dataset of CO2 emissions and ancillary data related to emissions for 343 cities
Cited by: 61
Author(s): Cathy Nangini, Anna Peregon, Philippe Ciais, Ulf Weddige, Felix Vogel, Jun Wang, François Marie Bréon, Simeran Bachra, Yilong Wang, K. R. Gurney, Yoshiki Yamagata, Kyra Appleby, Sara Telahoun, Josep G. Canadell, Arnulf Grübler, Shobhakar Dhakal, Felix Creutzig
Software Mentions: 5
Published: almost 6 years ago

10.34133/2019/7937156

instaGraminoid, a Novel Colorimetric Method to Assess Herbicide Resistance, Identifies Patterns of Cross-Resistance in Annual Ryegrass
Cited by: 1
Author(s): Jefferson Paril, Alexandre Fournier‐Level
Software Mentions: 5
Published: almost 6 years ago

10.21105/joss.00934

q2-sample-classifier: machine-learning tools for microbiome classification and regression
Cited by: 105
Author(s): Nicholas A. Bokulich, Matthew R. Dillon, Evan Bolyen, Benjamin Kaehler, Gavin A. Huttley, J. Gregory Caporaso
Software Mentions: 5
Published: about 6 years ago

10.3389/fnut.2020.577923

A Machine Learning Based Dose Prediction of Lutein Supplements for Individuals With Eye Fatigue
Cited by: 4
Author(s): Juntao Kan, Ao Li, Hong Zou, Liang Chen, Jun Du
Software Mentions: 5
Published: about 4 years ago

10.3390/ijms22084217

MET Exon 14 Skipping: A Case Study for the Detection of Genetic Variants in Cancer Driver Genes by Deep Learning
Cited by: 5
Author(s): Vladimir Nosi, Luca Alessandrì, Melissa Milan, Maddalena Arigoni, Silvia Benvenuti, Davide Cacchiarelli, Marcella Cesana, Sara Riccardo, Lucio Di Filippo, Francesca Cordero, Marco Beccuti, Paolo M. Comoglio, Raffaele Calogero
Software Mentions: 5
Published: over 3 years ago

10.3390/diagnostics11081361

GIST and Ghrelin: To Be or Not to Be?
Cited by: 2
Author(s): Iuliana Spiridon, Delia Ciobanu, Simona Eliza Giușcă, Dan Ferariu, I Pleşcă, Irina Draga Căruntu
Software Mentions: 5
Published: over 3 years ago

10.3389/fbioe.2020.00808

Riboflow: Using Deep Learning to Classify Riboswitches With ∼99% Accuracy
Cited by: 6
Author(s): Keshav Aditya R Premkumar, Ramit Bharanikumar, Ashok Palaniappan
Software Mentions: 5
Published: over 4 years ago

10.7717/peerj-cs.606

Provenance-and machine learning-based recommendation of parameter values in scientific workflows
Cited by: 0
Author(s): Daniel Silva, Esther Pacitti, Aline Paes, Daniel de Oliveira
Software Mentions: 5
Published: over 3 years ago

10.7717/peerj-cs.437

Classification model for accuracy and intrusion detection using machine learning approach
Cited by: 24
Author(s): Arushi Agarwal, Purushottam Sharma, Mohammed Alshehri, Ahmed A. Mohamed, Osama Alfarraj
Software Mentions: 5
Published: over 3 years ago

10.7717/peerj.3657

<tt>phydms</tt>: software for phylogenetic analyses informed by deep mutational scanning
Cited by: 21
Author(s): Sarah K Hilton, Michael B. Doud, Jesse D Bloom
Software Mentions: 5
Published: over 7 years ago

10.1016/j.dib.2020.106472

Dataset of sodium chloride sterile liquid in bottles for intravenous administration and fill level monitoring
Cited by: 2
Author(s): Danilo Pau, Bipin P. Kumar, Prashant Namekar, Gauri Dhande, Luca Simonetta
Software Mentions: 5
Published: almost 4 years ago

10.7717/peerj-cs.216

DeepMoney: counterfeit money detection using generative adversarial networks
Cited by: 10
Author(s): Toqeer Ali Syed, Salman Jan, Ahmad Alkhodre, Mohammad Nauman, Muhammad Amin, Muhammad Shoaib Siddiqui
Software Mentions: 5
Published: about 5 years ago

10.1523/JNEUROSCI.2715-16.2017

Focal Local Field Potential Signature of the Single-Axon Monosynaptic Thalamocortical Connection
Cited by: 23
Author(s): Espen Hagen, Janne Christine Fossum, Klas H. Pettersen, José-Mañuel Alonso, Harvey A. Swadlow, Gaute T. Einevoll
Software Mentions: 5
Published: over 7 years ago

10.3389/fmicb.2018.02680

Germination and Growth Analysis of Streptomyces lividans at the Single-Cell Level Under Varying Medium Compositions
Cited by: 5
Author(s): Joachim Koepff, Christian Carsten Sachs, Wolfgang Wiechert, Dietrich Kohlheyer, Katharina Nöh, Marco Oldiges, Alexander Grünberger
Software Mentions: 5
Published: almost 6 years ago

10.3389/fmicb.2020.603657

Human Papillomavirus Infections in Cervical Samples From HIV-Positive Women: Evaluation of the Presence of the Nonavalent HPV Genotypes and Genetic Diversity
Cited by: 3
Author(s): Catia Sias, Valerio Guarrasi, Claudia Minosse, Daniele Lapa, Franca Del Nonno, Maria Rosaria Capobianchi, Anna Rosa Garbuglia, Paola Del Porto, Paola Paci
Software Mentions: 5
Published: almost 4 years ago

10.3390/jcm10040892

Spinal Cord Morphology in Degenerative Cervical Myelopathy Patients; Assessing Key Morphological Characteristics Using Machine Vision Tools
Cited by: 9
Author(s): Kalum Ost, W. Bradley Jacobs, Nathan Evaniew, Julien Cohen‐Adad, David W. Anderson, David W. Cadotte
Software Mentions: 5
Published: over 3 years ago

10.1038/s42003-021-02566-4

Pseudomonas aeruginosa adapts to octenidine via a combination of efflux and membrane remodelling
Cited by: 7
Author(s): Lucy J. Bock, Philip M. Ferguson, Maria Clarke, Vichayanee Pumpitakkul, Matthew E. Wand, Paul-Enguerrand Fady, Leanne Allison, Roland A. Fleck, Matthew J. Shepherd, A. James Mason, J. Mark Sutton
Software Mentions: 5
Published: about 3 years ago

10.7554/eLife.55832

Temporal integration of auxin information for the regulation of patterning
Cited by: 79
Author(s): Carlos Galván‐Ampudia, Guillaume Cerutti, Jonathan Legrand, Géraldine Brunoud, Raquel Martín-Arevalillo, Romain Azaïs, Vincent Bayle, Steven Moussu, Christian Wenzl, Yvon Jaillais, Jan U. Lohmann, Christophe Godin, Teva Vernoux
Software Mentions: 5
Published: over 4 years ago

10.7554/eLife.64522

Topological signatures in regulatory network enable phenotypic heterogeneity in small cell lung cancer
Cited by: 33
Author(s): Lakshya Chauhan, Uday Ram, Kishore Hari, Mohit Kumar Jolly
Software Mentions: 5
Published: over 3 years ago

10.3390/cells9102283

Gut Microbiome Changes in Patients with Active Left-Sided Ulcerative Colitis after Fecal Microbiome Transplantation and Topical 5-aminosalicylic Acid Therapy
Cited by: 34
Author(s): Dagmar Schierová, Jan Březina, Jakub Mrázek, K. Fliegerová, Simona Kvasnová, Lukáš Bajer, Pavel Drastich
Software Mentions: 5
Published: about 4 years ago

10.3390/cells10061516

Statistical Approach to Incorporating Experimental Variability into a Mathematical Model of the Voltage-Gated Na+ Channel and Human Atrial Action Potential
Cited by: 0
Author(s): Daniel Gratz, Alexander Winkle, Seth H. Weinberg, Thomas J. Hund
Software Mentions: 5
Published: over 3 years ago

10.1186/s12911-017-0442-4

Development and validation of classifiers and variable subsets for predicting nursing home admission
Cited by: 15
Author(s): Mikko Nuutinen, Riikka‐Leena Leskelä, Ella Suojalehto, Anniina Tirronen, Vesa Komssi
Software Mentions: 5
Published: over 7 years ago

10.7717/peerj.5882

imGLAD: accurate detection and quantification of target organisms in metagenomes
Cited by: 20
Author(s): Juan Castro, Luis M. Rodriguez-R, William T. Harvey, Michael R. Weigand, Janet K. Hatt, Michelle Qiu Carter, Konstantinos T. Konstantinidis
Software Mentions: 5
Published: about 6 years ago

10.1186/s12859-019-3103-z

De novo Nanopore read quality improvement using deep learning
Cited by: 9
Author(s): Nathan LaPierre, Rob Egan, Wei Wang, Zhong Wang
Software Mentions: 5
Published: about 5 years ago

10.3389/fimmu.2013.00252

Inferring HIV Escape Rates from Multi-Locus Genotype Data
Cited by: 33
Author(s): Taylor A. Kessinger, Alan S. Perelson, Richard A. Neher
Software Mentions: 5
Published: almost 12 years ago

10.3389/fimmu.2018.02059

A Distinct Esophageal mRNA Pattern Identifies Eosinophilic Esophagitis Patients With Food Impactions
Cited by: 8
Author(s): Benjamin F. Sallis, Utkucan Acar, Kelsey Hawthorne, Stephen Babcock, Cynthia Kanagaratham, Jeffrey D. Goldsmith, Rachel Rosen, Jon A. Vanderhoof, Samuel Nurko, Edda Fiebiger
Software Mentions: 5
Published: about 6 years ago

10.3390/cancers12113199

Regulation of Canonical Oncogenic Signaling Pathways in Cancer via DNA Methylation
Cited by: 13
Author(s): Jennifer Lu, Premila M Wilfred, Darren Korbie, Matt Trau
Software Mentions: 5
Published: about 4 years ago

10.2196/12702

Privacy-Preserving Analysis of Distributed Biomedical Data: Designing Efficient and Secure Multiparty Computations Using Distributed Statistical Learning Theory
Cited by: 19
Author(s): Fida K. Dankar, Nisha Thorakkattu Madathil, Samar Dankar, Sabri Boughorbel
Software Mentions: 5
Published: over 5 years ago

10.1186/s12911-020-01154-6

A predictive analytics model for differentiating between transient ischemic attacks (TIA) and its mimics
Cited by: 9
Author(s): Alia Stanciu, Mihai Banciu, Alireza Sadighi, Kyle Marshall, Neil R. Holland, Vida Abedi, Ramin Zand
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0083506

Widespread Misinterpretable ChIP-seq Bias in Yeast
Cited by: 128
Author(s): Daechan Park, Yaelim Lee, Gurvani Bhupindersingh, Vishwanath R. Iyer
Software Mentions: 5
Published: almost 11 years ago

10.1093/gigascience/giaa054

Fcirc: A comprehensive pipeline for the exploration of fusion linear and circular RNAs
Cited by: 5
Author(s): Zhaoqing Cai, Hongzhang Xue, Yue Xu, Jens Köhler, Xiaoyu Cheng, Yanjun Dai, Jie Zheng, Haiyun Wang
Software Mentions: 5
Published: over 4 years ago

10.7554/eLife.54026

A decentralised neural model explaining optimal integration of navigational strategies in insects
Cited by: 52
Author(s): Xuelong Sun, Shigang Yue, Michael Mangan
Software Mentions: 5
Published: over 4 years ago

10.1186/s13059-021-02451-7

Analytic Pearson residuals for normalization of single-cell RNA-seq UMI data
Cited by: 35
Author(s): Jan Lause, Philipp Berens, Dmitry Kobak
Software Mentions: 5
Published: about 3 years ago

10.1093/ve/vex042

TreeTime: Maximum-likelihood phylodynamic analysis
Cited by: 786
Author(s): Pavel Sagulenko, Vadim Puller, Richard A. Neher
Software Mentions: 5
Published: almost 7 years ago

10.3389/fnhum.2021.700281

A Neural Network Model of Lexical-Semantic Competition During Spoken Word Recognition
Cited by: 3
Author(s): Mihaela Duta, Kim Plunkett
Software Mentions: 5
Published: about 3 years ago

10.18699/VJ21.002

Application of alternative <i>de novo</i> motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA2 binding sites
Cited by: 3
Author(s): Anton Vitalievich Tsukanov, Victor G. Levitsky, Т. И. Меркулова
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0146581

Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain
Cited by: 21
Author(s): Lev E. Givon, Aurel A. Lazar
Software Mentions: 5
Published: almost 9 years ago

10.3389/fgene.2019.01387

Analysis of Single-Cell Gene Pair Coexpression Landscapes by Stochastic Kinetic Modeling Reveals Gene-Pair Interactions in Development
Cited by: 7
Author(s): Cameron P. Gallivan, Honglei Ren, Elizabeth L. Read
Software Mentions: 5
Published: almost 5 years ago

10.1107/S2052252517006212

Healing X-ray scattering images
Cited by: 10
Author(s): Jiliang Liu, Julien Lhermitte, Ye Tian, Zheng Zhang, D. Yu, Kevin G. Yager
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0212849

DeephESC 2.0: Deep Generative Multi Adversarial Networks for improving the classification of hESC
Cited by: 11
Author(s): Rajkumar Theagarajan, Bir Bhanu
Software Mentions: 5
Published: over 5 years ago

10.1128/mBio.03109-19

A Multiplex Fluidic Chip for Rapid Phenotypic Antibiotic Susceptibility Testing
Cited by: 16
Author(s): Pikkei Wistrand-Yuen, Christer Malmberg, Nikos Fatsis-Kavalopoulos, Moritz Lübke, Thomas Tängdén, Johan Kreuger
Software Mentions: 5
Published: over 4 years ago

10.1128/mSystems.00230-18

Emergent Subpopulation Behavior Uncovered with a Community Dynamic Metabolic Model of <i>Escherichia coli</i> Diauxic Growth
Cited by: 74
Author(s): A. Succurro, Daniel Segrè, Oliver Ebenhöh
Software Mentions: 5
Published: over 5 years ago

10.2196/27110

Prediction Model of Anastomotic Leakage Among Esophageal Cancer Patients After Receiving an Esophagectomy: Machine Learning Approach
Cited by: 3
Author(s): Ziran Zhao, Xi Cheng, Xiao Sun, Shanrui Ma, Hao Feng, Liang Zhao
Software Mentions: 5
Published: over 3 years ago

10.3390/v12091026

Spatio-Temporal Mutational Profile Appearances of Swedish SARS-CoV-2 during the Early Pandemic
Cited by: 10
Author(s): Jiaxin Ling, Rachel A. Hickman, Jinlin Li, Xi Lu, Johanna F. Lindahl, Åke Lundkvist, Josef D. Järhult
Software Mentions: 5
Published: about 4 years ago

10.3390/ijms21124208

Comparing a Query Compound with Drug Target Classes Using 3D-Chemical Similarity
Cited by: 4
Author(s): Sang-Hyeok Lee, Sang-Jin Ahn, Mi‐Hyun Kim
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0222523

The feasibility of using citizens to segment anatomy from medical images: Accuracy and motivation
Cited by: 2
Author(s): Judith R. Meakin, Ryan M. Ames, Jonathan C. G. Jeynes, Joanne R. Welsman, Michael Gundry, Karen Knapp, Richard Everson
Software Mentions: 5
Published: about 5 years ago

10.1186/s40064-016-2573-y

Computing symmetrical strength of N-grams: a two pass filtering approach in automatic classification of text documents
Cited by: 10
Author(s): Deepak Agnihotri, Kesari Verma, Priyanka Tripathi
Software Mentions: 5
Published: over 8 years ago

10.1186/1751-0473-4-5

Motmot, an open-source toolkit for realtime video acquisition and analysis
Cited by: 66
Author(s): Andrew Straw, Michael H. Dickinson
Software Mentions: 5
Published: over 15 years ago

10.1186/s13059-014-0511-2

A genomic and evolutionary approach reveals non-genetic drug resistance in malaria
Cited by: 34
Author(s): Jonathan D. Herman, Daniel P. Rice, Ulf Ribacke, Jacob Silterra, Amy Deik, Eli L. Moss, Kate M Broadbent, Daniel E. Neafsey, Michael M. Desai, Clary B. Clish, Ralph Mazitschek, Dyann F. Wirth
Software Mentions: 5
Published: about 10 years ago

10.1186/s12859-020-03801-1

PyGNA: a unified framework for geneset network analysis
Cited by: 0
Author(s): Viola Fanfani, Francesco Serra Cassano, Giovanni Stracquadanio
Software Mentions: 5
Published: about 4 years ago

10.3390/s21093145

An Evaluation of Motion Trackers with Virtual Reality Sensor Technology in Comparison to a Marker-Based Motion Capture System Based on Joint Angles for Ergonomic Risk Assessment
Cited by: 4
Author(s): Jan P. Vox, Anika Weber, Karen Insa Wolf, Krzysztof Izdebski, Thomas Schüler, Peter König, Frank Wallhoff, Daniel Friemert
Software Mentions: 5
Published: over 3 years ago

10.18383/j.tom.2016.00172

Dynamic Susceptibility Contrast-MRI Quantification Software Tool: Development and Evaluation
Cited by: 7
Author(s): Panagiotis Korfiatis, Timothy L. Kline, Zachary S. Kelm, Rickey E. Carter, Leland Hu, Bradley J. Erickson
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pone.0222165

Advancing computational biology and bioinformatics research through open innovation competitions
Cited by: 5
Author(s): Andrea Blasco, Michael G. Endres, Rinat A. Sergeev, Anup Jonchhe, N. J. Maximilian Macaluso, Rajiv Narayan, Ted Natoli, Jin Hyun Paik, Bryan Briney, Chunlei Wu, Andrew I. Su, Aravind Subramanian, Karim R. Lakhani
Software Mentions: 5
Published: about 5 years ago

10.3389/fnsyn.2019.00017

Mechanisms of PTPσ-Mediated Presynaptic Differentiation
Cited by: 28
Author(s): Claire Bomkamp, Nirmala Padmanabhan, Benyamin Karimi, Yuan Ge, Jesse T. Chao, Christopher Loewen, Tabrez J. Siddiqui, Ann Marie Craig
Software Mentions: 5
Published: over 5 years ago

10.3389/fncel.2017.00332

Heterogeneity of the Axon Initial Segment in Interneurons and Pyramidal Cells of Rodent Visual Cortex
Cited by: 54
Author(s): Felix Höfflin, Alexander Jack, Christian Riedel, Julia Angela Mack-Bucher, Johannes Roos, Corinna Corcelli, Christian Schultz, Petra Wahle, Maren Engelhardt
Software Mentions: 5
Published: about 7 years ago

10.3390/s19061361

Smartbins: Using Intelligent Harvest Baskets to Estimate the Stages of Berry Harvesting
Cited by: 5
Author(s): Patricio Galeas, Carlos Muñoz, Juan Ignacio Huircán, Mario Fernández, Luis A. Segura‐Ponce, Cristian Durán-Faúndez
Software Mentions: 5
Published: over 5 years ago

10.3390/s19030521

A Comparison of Machine Learning and Deep Learning Techniques for Activity Recognition using Mobile Devices
Cited by: 37
Author(s): Alejandro Baldominos, Alejandro Cervantes, Yago Sáez, Pedro Isasi
Software Mentions: 5
Published: almost 6 years ago

10.1038/s41598-021-94422-y

Semantic segmentation of PolSAR image data using advanced deep learning model
Cited by: 30
Author(s): Rajat Garg, Anil Kumar, Nikunj Bansal, Manish Prateek, Shashi Kumar
Software Mentions: 5
Published: over 3 years ago

10.1099/mgen.0.000500

Identifying novel β-lactamase substrate activity through in silico prediction of antimicrobial resistance
Cited by: 7
Author(s): Kara K. Tsang, Finlay Maguire, Haley L. Zubyk, Sommer Chou, Arman Edalatmand, Gerard D. Wright, Robert G. Beiko, Andrew G. McArthur
Software Mentions: 5
Published: almost 4 years ago

10.1155/2014/748750

The Preventable Risk Integrated ModEl and Its Use to Estimate the Health Impact of Public Health Policy Scenarios
Cited by: 45
Author(s): Peter Scarborough, Richard Harrington, Anja Mizdrak, Lijuan Zhou, Aiden Doherty
Software Mentions: 5
Published: almost 11 years ago

10.1371/journal.pone.0183057

Data-driven coarse graining of large biomolecular structures
Cited by: 11
Author(s): Yi‐Ling Chen, Michael Habeck
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pone.0218966

Intrinsic dimensionality of human behavioral activity data
Cited by: 1
Author(s): Luana Fragoso, Tuhin Paul, Flaviu Vadan, Kevin G. Stanley, Scott Bell, Nathaniel D. Osgood
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0081462

Estimation of the Horizon in Photographed Outdoor Scenes by Human and Machine
Cited by: 5
Author(s): Christian Herdtweck, Christian Wallraven
Software Mentions: 5
Published: almost 11 years ago

10.7554/eLife.43415

Precise excitation-inhibition balance controls gain and timing in the hippocampus
Cited by: 67
Author(s): Aanchal Bhatia, Sahil Moza, Upinder S. Bhalla
Software Mentions: 5
Published: over 5 years ago

10.1007/s00404-020-05949-w

A risk factor analysis of complications after surgery for vulvar cancer
Cited by: 8
Author(s): Georgios Gitas, Louisa Proppe, Sascha Baum, M. Kruggel, Achim Rody, Dimitrios Tsolakidis, D Zouzoulas, Antonio Simone Laganà, V. Guenther, Damaris Freytag, İbrahim Alkatout
Software Mentions: 5
Published: almost 4 years ago

10.3389/fcell.2021.732370

An Integrative Network Science and Artificial Intelligence Drug Repurposing Approach for Muscle Atrophy in Spaceflight Microgravity
Cited by: 2
Author(s): Vidya Manian, Jairo Orozco-Sandoval, Victor Díaz-Martínez
Software Mentions: 5
Published: about 3 years ago

10.1371/journal.pone.0246396

High SARS-CoV-2 load in the nasopharynx of patients with a mild form of COVID-19 is associated with clinical deterioration regardless of the hydroxychloroquine administration
Cited by: 4
Author(s): Alexey A. Komissarov, Ivan Molodtsov, O. Ivanova, Elena Maryukhnich, Svetlana S. Kudryavtseva, А. И. Мазус, E. L. Nikonov, Elena Vasilieva
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41598-020-77364-9

A potential energy and mutual information based link prediction approach for bipartite networks
Cited by: 7
Author(s): Purushottam Kumar, Dolly Sharma
Software Mentions: 5
Published: almost 4 years ago

10.1186/s12864-018-4704-z

OMGene: mutual improvement of gene models through optimisation of evolutionary conservation
Cited by: 6
Author(s): Michael Dunne, Steven Kelly
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0254514

Reaching to inhibit a prepotent response: A wearable 3-axis accelerometer kinematic analysis
Cited by: 2
Author(s): Alessia Angeli, Irene Valori, Teresa Farroni, Gustavo Marfia
Software Mentions: 5
Published: over 3 years ago

10.3389/fcvm.2021.619386

Low-Density Lipoprotein Cholesterol 4: The Notable Risk Factor of Coronary Artery Disease Development
Cited by: 7
Author(s): Dongmei Wu, Qiuju Yang, Baohua Su, Hao Jia, MA Hui-rong, Weilan Yuan, Junhui Gao, Feifei Ding, Yue Xu, Huifeng Wang, Jiangman Zhao, Bingqiang Li
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0201469

Patient-specific anatomical model for deep brain stimulation based on 7 Tesla MRI
Cited by: 55
Author(s): Yuval Duchin, Reuben R. Shamir, Rémi Patriat, Jin‐Young Kim, Jerrold L. Vitek, Guillermo Sapiro, Noam Harel
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-021-86135-z

Analysis of the response of the cell membrane of Saccharomyces cerevisiae during the detoxification of common lignocellulosic inhibitors
Cited by: 10
Author(s): Pau Cabañeros López, Chuantao Peng, Nils Arneborg, Helena Junicke, Krist V. Gernaey
Software Mentions: 5
Published: over 3 years ago

10.3389/fonc.2020.00272

Inferring Personalized and Race-Specific Causal Effects of Genomic Aberrations on Gleason Scores: A Deep Latent Variable Model
Cited by: 2
Author(s): Zhong Chen, Andrea Edwards, Chindo Hicks, Kun Zhang
Software Mentions: 5
Published: over 4 years ago

10.3389/fpsyt.2016.00130

Development and Clinical Evaluation of an mHealth Application for Stress Management
Cited by: 26
Author(s): Brent Winslow, George L. Chadderdon, Sara Dechmerowski, David Jones, Solomon Kalkstein, Jennifer L. Greene, Philip Gehrman
Software Mentions: 5
Published: over 8 years ago

10.1038/s41598-020-60366-y

Engineering Meteorological Features to Select Stress Tolerant Hybrids in Maize
Cited by: 6
Author(s): Gordan Mimić, Sanja Brdar, M. Brkic, Marko Panić, Oskar Marko, Vladimir Crnojević
Software Mentions: 5
Published: over 4 years ago

10.15252/embj.2020107245

Desensitisation of Notch signalling through dynamic adaptation in the nucleus
Cited by: 13
Author(s): Ranjith Viswanathan, Jonas Hartmann, Cristina Pallares Cartes, Stefano De Renzis
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pgen.1009774

A scalable Drosophila assay for clinical interpretation of human PTEN variants in suppression of PI3K/AKT induced cellular proliferation
Cited by: 4
Author(s): Payel Ganguly, Landiso Madonsela, Jesse T. Chao, Christopher Loewen, Timothy P. O’Connor, Esther M. Verheyen, Douglas W. Allan
Software Mentions: 4
Published: about 3 years ago

10.1093/bib/bbw058

Graphics processing units in bioinformatics, computational biology and systems biology
Cited by: 53
Author(s): Marco S. Nobile, Paolo Cazzaniga, Andrea Tangherloni, Daniela Besozzi
Software Mentions: 4
Published: over 8 years ago

10.1038/s41598-019-46686-8

High-throughput stability screening for detergent-solubilized membrane proteins
Cited by: 69
Author(s): Vadim Kotov, Kim Bartels, Katharina Veith, Inokentijs Josts, Udaya Kumar Tiruttani Subhramanyam, Christian Günther, Jörg Labahn, Thomas C. Marlovits, Isabel Moraes, Henning Tidow, Christian Löw, María García-Alai
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pcbi.1006077

New methods for computational decomposition of whole-mount in situ images enable effective curation of a large, highly redundant collection of Xenopus images
Cited by: 1
Author(s): Ilya Patrushev, Christina James-Zorn, Aldo Ciau-Uitz, Roger Patient, Michael J. Gilchrist
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pcbi.1002952

Spatial Pattern Dynamics of 3D Stem Cell Loss of Pluripotency via Rules-Based Computational Modeling
Cited by: 31
Author(s): David W. White, Melissa A. Kinney, Todd C. McDevitt, Melissa L. Kemp
Software Mentions: 4
Published: over 11 years ago

10.1186/s12915-020-00911-3

CloneSifter: enrichment of rare clones from heterogeneous cell populations
Cited by: 11
Author(s): David Feldman, FuNien Tsai, Anthony J. Garrity, Ryan O’Rourke, Lisa Brenan, Patricia Ho, Elizabeth M. Gonzalez, Silvana Konermann, Cory M. Johannessen, Rameen Beroukhim, Pratiti Bandopadhayay, Paul C. Blainey
Software Mentions: 4
Published: almost 4 years ago

10.1111/acel.13443

The antagonistic pleiotropy of insulin‐like growth factor 1
Cited by: 22
Author(s): William B. Zhang, Kenny Ye, Nir Barzilai, Sofiya Milman
Software Mentions: 4
Published: over 3 years ago

10.1038/s41598-019-47857-3

Real-Time Selective Sequencing with RUBRIC: Read Until with Basecall and Reference-Informed Criteria
Cited by: 37
Author(s): Harrison Edwards, Raga Krishnakumar, Anupama Sinha, Sara W. Bird, Kamlesh D. Patel, Michael Bartsch
Software Mentions: 4
Published: over 5 years ago

10.3389/fninf.2014.00015

Data management routines for reproducible research using the G-Node Python Client library
Cited by: 12
Author(s): Andrey Sobolev, Stoewer Adrian, Michael A. Pereira, Christian Johannes Kellner, Christian Garbers, Philipp L. Rautenberg, Thomas Wachtler
Software Mentions: 4
Published: over 10 years ago

10.1038/s41598-018-33900-2

Using volunteered observations to map human exposure to ticks
Cited by: 23
Author(s): Irene Garcia‐Martí, R. Zurita-Milla, Margriet Harms, Arno Swart
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pcbi.1006844

A new clustering and nomenclature for beta turns derived from high-resolution protein structures
Cited by: 50
Author(s): Maxim V. Shapovalov, Slobodan Vučetić, Roland L. Dunbrack
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-017-13828-9

A generalized simulation development approach for predicting refugee destinations
Cited by: 54
Author(s): Diana Suleimenova, David Bell, Derek Groen
Software Mentions: 4
Published: about 7 years ago

10.1038/s41598-018-24318-x

EEG Analytics for Early Detection of Autism Spectrum Disorder: A data-driven approach
Cited by: 206
Author(s): William J. Bosl, Helen Tager‐Flusberg, Charles A. Nelson
Software Mentions: 4
Published: over 6 years ago

10.1155/2017/2794040

The Effect of Different Pollination on the Expression of Dangshan Su Pear MicroRNA
Cited by: 12
Author(s): Xi Cheng, Chongchong Yan, Jinyun Zhang, Chenhui Ma, Shumei Li, Qing Jin, Nan Zhang, Yunpeng Cao, Yi Lin, Yongping Cai
Software Mentions: 4
Published: almost 8 years ago

10.1364/BOE.416737

Dual-view light-sheet imaging through a tilted glass interface using a deformable mirror
Cited by: 7
Author(s): Nikita Vladimirov, Friedrich Preußer, Jan Wiśniewski, Ziv Yaniv, Ravi A. Desai, Andrew Woehler, Stephan Preibisch
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pcbi.1008244

Alcoholic liver disease: A registry view on comorbidities and disease prediction
Cited by: 10
Author(s): Dhouha Grissa, Ditlev Nytoft Rasmussen, Aleksander Krag, Søren Brunak, Lars Juhl Jensen
Software Mentions: 4
Published: about 4 years ago

10.1038/s41598-019-50790-0

Signal flow control of complex signaling networks
Cited by: 6
Author(s): Daewon Lee, Kwang-Hyun Cho
Software Mentions: 4
Published: about 5 years ago

10.1186/s12938-020-00795-y

Optimal length of R–R interval segment window for Lorenz plot detection of paroxysmal atrial fibrillation by machine learning
Cited by: 6
Author(s): Masaya Kisohara, Yoshio Masuda, Emi Yuda, Naonori Ueda, Junichiro Hayano
Software Mentions: 4
Published: over 4 years ago

Projects: pypi: numpy

Papers Mentioning numpy 832