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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1093/ve/vex042

https://doi.org/10.1093/ve/vex042

TreeTime: Maximum-likelihood phylodynamic analysis

Cited by: 786
Author(s): Pavel Sagulenko, Vadim Puller, Richard A. Neher
Published: over 7 years ago

Software Mentions 5

cran: LSD
Lots of Superior Depictions
Papers that mentioned: 55
Very Likely Science (75)
pypi: FFPopSim
Library to simulate evolution of large populations that are polymorphic at many loci.
Papers that mentioned: 8
Very Likely Science (80)
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832
Very Likely Science (100)
pypi: scipy
Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071
Very Likely Science (100)
pypi: TreeTime
TreeTime is a to-do list manager, test report tool, project manager, family ancestry editor,mind-mapping tool, etc. Using TreeTime you can categorise and organise any data in tree structures.You can define several trees, each with a different structure, on the same data. You can use functions(sums, ratios and means) recursively up the branches of a tree.
Papers that mentioned: 82
Likely Science (40)