Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: numpy

https://packages.ecosyste.ms/registries/pypi.org/packages/numpy

Fundamental package for array computing in Python
142 versions
Latest release: 7 months ago
24,932 dependent packages
196,497,842 downloads last month

Papers Mentioning numpy 832

10.1371/journal.pone.0243692
Evaluation of pool-based testing approaches to enable population-wide screening for COVID-19
Cited by: 22
Author(s): Timo de Wolff, Dirk Pflüger, Michael F. Rehme, Janin Heuer, Martin Immanuel Bittner
Software Mentions: 1
Published: over 3 years ago
10.3389/fimmu.2018.02539
Major TCR Repertoire Perturbation by Immunodominant HLA-B*44:03-Restricted CMV-Specific T Cells
Cited by: 18
Author(s): Meriem Attaf, Amna Malik, Mai Charlotte Krogh Severinsen, Julia Roider, Paul Ogongo, Søren Buus, Thumbi Ndung’u, Alasdair Leslie, Henrik N. Kløverpris, Philippa C. Matthews, Andrew K. Sewell, Philip Goulder
Software Mentions: 1
Published: over 5 years ago
10.1523/ENEURO.0223-19.2019
The Future Is Open: Open-Source Tools for Behavioral Neuroscience Research
Cited by: 38
Author(s): Samantha R. White, Linda M. Amarante, Alexxai V. Kravitz, Mark Laubach
Software Mentions: 1
Published: almost 5 years ago
10.3389/fncom.2020.00078
Learning Long Temporal Sequences in Spiking Networks by Multiplexing Neural Oscillations
Cited by: 5
Author(s): Philippe Vincent-Lamarre, Matias Calderini, Jean-Philippe Thivierge
Software Mentions: 1
Published: over 3 years ago
10.1007/s00223-021-00832-5
Quantitative Backscattered Electron Imaging of Bone Using a Thermionic or a Field Emission Electron Source
Cited by: 13
Author(s): Markus Hartmann, Stéphane Blouin, Barbara M. Misof, Nadja Fratzl–Zelman, Paul Roschger, Andrea Berzlanovich, G.M. Gruber, Peter C. Brugger, Jochen Zwerina, Peter Fratzl
Software Mentions: 1
Published: about 3 years ago
10.3389/fdata.2021.589417
MARGIN: Uncovering Deep Neural Networks Using Graph Signal Analysis
Cited by: 0
Author(s): Rushil Anirudh, Jayaraman J. Thiagarajan, Rahul Sridhar, Peer-Timo Bremer
Software Mentions: 1
Published: about 3 years ago
10.1002/mrm.27531
On the sensitivity of quantitative susceptibility mapping for measuring trabecular bone density
Cited by: 17
Author(s): Maximilian N. Diefenbach, Jakob Meineke, Stefan Ruschke, Thomas Baum, Alexandra S. Gersing, Dimitrios C. Karampinos
Software Mentions: 1
Published: over 5 years ago
10.7717/peerj.1851
Dramatyping: a generic algorithm for detecting reasonable temporal correlations between drug administration and lab value alterations
Cited by: 1
Author(s): Axel Newe
Software Mentions: 1
Published: about 8 years ago
10.3390/ma14185132
A Study to Derive Equivalent Mechanical Properties of Porous Materials with Orthotropic Elasticity
Cited by: 1
Author(s): Changmin Pyo, Younghyun Kim, Jae-Woong Kim, Seok Joo Kang
Software Mentions: 1
Published: over 2 years ago
10.12688/f1000research.15146.2
aMatReader: Importing adjacency matrices via Cytoscape Automation
Cited by: 3
Author(s): Brett Settle, David Otasek, John H. Morris, Barry Demchak
Software Mentions: 1
Published: almost 6 years ago
10.1371/journal.pone.0255212
The transmission of SARS-CoV-2 is likely comodulated by temperature and by relative humidity
Cited by: 19
Author(s): Kevin S. Raines, Sebastian Doniach, Gyan Bhanot
Software Mentions: 1
Published: almost 3 years ago
10.1016/j.yjsbx.2020.100023
Reconstruction of Average Subtracted Tubular Regions (RASTR) enables structure determination of tubular filaments by cryo-EM
Cited by: 1
Author(s): Peter S. Randolph, Scott M. Stagg
Software Mentions: 1
Published: over 4 years ago
10.1177/0037549721996031
Evolving convolutional neural network parameters through the genetic algorithm for the breast cancer classification problem
Cited by: 16
Author(s): Khatereh Davoudi, Parimala Thulasiraman
Software Mentions: 1
Published: about 3 years ago
10.3390/s20195668
Generalized Deep Neural Network Model for Cuffless Blood Pressure Estimation with Photoplethysmogram Signal Only
Cited by: 44
Author(s): Yan Cheng Hsu, Yung‐Hui Li, Chung‐Liang Chang, Latifa Nabila Harfiya
Software Mentions: 1
Published: over 3 years ago
10.3390/s20185265
Malware Detection of Hangul Word Processor Files Using Spatial Pyramid Average Pooling
Cited by: 5
Author(s): Young-Seob Jeong, Jiyoung Woo, Sang‐Min Lee, Ah Reum Kang
Software Mentions: 1
Published: over 3 years ago
10.1002/advs.202000900
A Biomimetic Approach toward Enhancing Angiogenesis: Recombinantly Expressed Domain V of Human Perlecan Is a Bioactive Molecule That Promotes Angiogenesis and Vascularization of Implanted Biomaterials
Cited by: 20
Author(s): Xiaoting Lin, Fengying Tang, Shouyuan Jiang, Heba Khamis, André Bongers, John M. Whitelock, Megan S. Lord, Jelena Rnjak‐Kovacina
Software Mentions: 1
Published: almost 4 years ago
10.1186/1471-2105-15-33
QTrim: a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform
Cited by: 25
Author(s): Ram Krishna Shrestha, Baruch Lubinsky, Vijay B Bansode, Mónica B J Moinz, Grace P. McCormack, Simon Travers
Software Mentions: 1
Published: over 10 years ago
10.3390/s18114073
Enhancement of Localization Systems in NLOS Urban Scenario with Multipath Ray Tracing Fingerprints and Machine Learning
Cited by: 23
Author(s): Marcelo N. de Sousa, Reiner S. Thomä
Software Mentions: 1
Published: over 5 years ago
10.3390/e22091004
A-DVM: A Self-Adaptive Variable Matrix Decision Variable Selection Scheme for Multimodal Problems
Cited by: 1
Author(s): Marco Antônio Florenzano Mollinetti, Bernardo B. Gatto, Mário Tasso Ribeiro Serra Neto, Takahito Kuno
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-020-80939-1
Connecting complex networks to nonadditive entropies
Cited by: 11
Author(s): Rute Oliveira, Samuraí Brito, L. R. da Silva, Constantino Tsallis
Software Mentions: 1
Published: over 3 years ago
10.1038/s41598-020-68468-3
Standardization procedure for flow cytometry data harmonization in prospective multicenter studies
Cited by: 18
Author(s): Lucas Le Lann, P Jouve, Marta E. Alarcón‐Riquelme, Christophe Jamin, Jacques‐Olivier Pers
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0203434
Computation of the normalized cross-correlation by fast Fourier transform
Cited by: 38
Author(s): Artan Kaso
Software Mentions: 1
Published: over 5 years ago
10.1038/s41598-020-65889-y
Cell type specific adhesion to surfaces functionalised by amine plasma polymers
Cited by: 24
Author(s): Petra Černochová, Lucie Blahová, Jiřina Medalová, David Nečas, Miroslav Michlíček, Preeti Kaushik, Jan Přibyl, Jana Bartošíková, Anton Manakhov, Lucie Bačáková, Lenka Zajı́čková
Software Mentions: 1
Published: almost 4 years ago
10.7554/eLife.49000
From plasmodesma geometry to effective symplasmic permeability through biophysical modelling
Cited by: 25
Author(s): Eva E. Deinum, Bela M. Mulder, Yoselin Benitez‐Alfonso
Software Mentions: 1
Published: over 4 years ago
10.18632/oncotarget.13103
OutLyzer: software for extracting low-allele-frequency tumor mutations from sequencing background noise in clinical practice
Cited by: 18
Author(s): Etienne Müller, Nicolas Goardon, Baptiste Brault, Antoine Rousselin, Germain Paimparay, Angélina Legros, Robin Fouillet, Olivia Bruet, Aurore Tranchant, Florian Domin, Chankannira San, Céline Quesnelle, Thierry Frébourg, Agathe Ricou, Sophie Krieger, Dominique Vaur, Laurent Castéra
Software Mentions: 1
Published: over 7 years ago
10.1186/s12859-021-04148-x
The Coronavirus Network Explorer: mining a large-scale knowledge graph for effects of SARS-CoV-2 on host cell function
Cited by: 13
Author(s): A. Krämer, Jean-Noël Billaud, Stuart Tugendreich, Dan Shiffman, Martin Jones, Jeff Green
Software Mentions: 1
Published: about 3 years ago
10.1038/s41598-019-48219-9
Author Correction: Exploring the Sequence-based Prediction of Folding Initiation Sites in Proteins
Cited by: 3
Author(s): Daniele Raimondi, Gabriele Orlando, Rita Pancsa, Taushif Khan, Wim Vranken
Software Mentions: 1
Published: almost 5 years ago
10.1371/journal.pone.0228434
Features spaces and a learning system for structural-temporal data, and their application on a use case of real-time communication network validation data
Cited by: 0
Author(s): Guido Schwenk, Ben Jochinke, Klaus Robert Müller
Software Mentions: 1
Published: over 4 years ago
10.3390/mps3030055
Quantitative Microdialysis: Experimental Protocol and Software for Small Molecule Protein Affinity Determination and for Exclusion of Compounds with Poor Physicochemical Properties
Cited by: 3
Author(s): Steven Shave, Nhan T. Pham, Connor B. Śmieja, Manfred Auer
Software Mentions: 1
Published: almost 4 years ago
10.1371/journal.pone.0109696
Evolutionary Strategies of Viruses, Bacteria and Archaea in Hydrothermal Vent Ecosystems Revealed through Metagenomics
Cited by: 57
Author(s): R. Anderson, Mitchell L. Sogin, John A. Baross
Software Mentions: 1
Published: over 9 years ago
10.1038/s41598-017-18004-7
A hippocampo-cerebellar centred network for the learning and execution of sequence-based navigation
Cited by: 53
Author(s): Bénédicte M. Babayan, Aurélie Watilliaux, Guillaume Viejo, Anne‐Lise Paradis, Benoît Girard, Laure Rondi-Reig
Software Mentions: 1
Published: over 6 years ago