pypi: Isomap | Projects | Ecosyste.ms: Papers

10.1186/s12920-019-0578-4

Deconvolution of transcriptomes and miRNomes by independent component analysis provides insights into biological processes and clinical outcomes of melanoma patients
Cited by: 21
Author(s): Petr V. Nazarov, Anke Wienecke-Baldacchino, Andreï Zinovyev, Urszula Czerwińska, Arnaud Muller, Dorothée Nashan, Gunnar Dittmar, Francisco Azuaje, Stephanie Kreis
Software Mentions: 14
Published: about 5 years ago

10.1186/s13059-019-1898-6

Accuracy, robustness and scalability of dimensionality reduction methods for single-cell RNA-seq analysis
Cited by: 123
Author(s): Shuang Sun, Jiaqiang Zhu, Ying Ma, Xiang Zhou
Software Mentions: 13
Published: almost 5 years ago

10.3389/fgene.2021.655536

Machine Intelligence in Single-Cell Data Analysis: Advances and New Challenges
Cited by: 30
Author(s): Jiajia Li, Zusen Fan, Weiling Zhao, Xiaobo Zhou
Software Mentions: 12
Published: over 3 years ago

10.3389/fmolb.2019.00025

Anncolvar: Approximation of Complex Collective Variables by Artificial Neural Networks for Analysis and Biasing of Molecular Simulations
Cited by: 22
Author(s): Dalibor Trapl, Izabela Horvacanin, Václav Mareška, Furkan Özçelik, Gözde Ünal, Vojtěch Spiwok
Software Mentions: 11
Published: over 5 years ago

10.1155/2014/213656

A Review of Feature Extraction Software for Microarray Gene Expression Data
Cited by: 10
Author(s): Ching Siang Tan, Wai S oon Ting, Mohd Saberi Mohamad, Weng Howe Chan, Safaai Deris, Zuraini Ali Shah
Software Mentions: 8
Published: almost 11 years ago

10.1371/journal.pcbi.1006907

Ten quick tips for effective dimensionality reduction
Cited by: 164
Author(s): Linh P. Nguyen, Susan Holmes
Software Mentions: 8
Published: over 5 years ago

10.1371/journal.pcbi.1008720

Impact of between-tissue differences on pan-cancer predictions of drug sensitivity
Cited by: 4
Author(s): John P. Lloyd, Matthew B. Soellner, Sofía D. Merajver, Jun Z. Li
Software Mentions: 7
Published: over 3 years ago

10.1016/j.csbj.2020.05.017

Constructing knowledge graphs and their biomedical applications
Cited by: 115
Author(s): David N. Nicholson, Casey S. Greene
Software Mentions: 6
Published: almost 5 years ago

10.3389/fcimb.2021.633573

Abundance and Expression of Shiga Toxin Genes in Escherichia coli at the Recto-Anal Junction Relates to Host Immune Genes
Cited by: 6
Author(s): Zhe Pan, Yanhong Chen, Tim A. McAllister, Michael G. Gänzle, Graham Plastow, Le Luo Guan
Software Mentions: 6
Published: over 3 years ago

10.1186/s12859-017-1589-9

Subgroup detection in genotype data using invariant coordinate selection
Cited by: 6
Author(s): Daniel Fischer, Mervi Honkatukia, Maria Tuiskula-Haavisto, Klaus Nordhausen, D. Cavero, Rudolf Preisinger, Johanna Vilkki
Software Mentions: 5
Published: over 7 years ago

10.3390/cancers12082257

A Global Gene Body Methylation Measure Correlates Independently with Overall Survival in Solid Cancer Types
Cited by: 1
Author(s): Dietmar Pils, Elisabeth Steindl, Anna Bachmayr-Heyda, Sabine Dekan, Stefanie Aust
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0218966

Intrinsic dimensionality of human behavioral activity data
Cited by: 1
Author(s): Luana Fragoso, Tuhin Paul, Flaviu Vadan, Kevin G. Stanley, Scott Bell, Nathaniel D. Osgood
Software Mentions: 5
Published: over 5 years ago

10.1186/1752-0509-1-27

Non-linear dimensionality reduction of signaling networks
Cited by: 18
Author(s): Sergii Ivakhno, J. Douglas Armstrong
Software Mentions: 5
Published: over 17 years ago

10.7554/eLife.39800

Plasmodium-specific atypical memory B cells are short-lived activated B cells
Cited by: 42
Author(s): Damián Pérez‐Mazliah, Peter J. Gardner, Edina Schweighoffer, Sarah McLaughlin, Caroline Hosking, Irene Tumwine, Randall S. Davis, Alexandre J. Potocnik, Victor L. J. Tybulewicz, Jean Langhorne
Software Mentions: 5
Published: about 6 years ago

10.1093/plankt/fbab033

Key drivers structuring rotifer communities in ponds: insights into an agricultural landscape
Cited by: 10
Author(s): Gabriela Onandía, Sebastian Maassen, Camille Musseau, Stella A. Berger, Carla Olmo, Jonathan M. Jeschke, Gunnar Lischeid
Software Mentions: 4
Published: over 3 years ago

10.7554/eLife.11351

Multivariate analysis of electrophysiological diversity of Xenopus visual neurons during development and plasticity
Cited by: 21
Author(s): Christopher M. Ciarleglio, Arseny S. Khakhalin, Angelia F Wang, Alexander C Constantino, Sarah P Yip, Carlos D. Aizenman
Software Mentions: 4
Published: about 9 years ago

10.1002/ctm2.206

Progress and applications of mass cytometry in sketching immune landscapes
Cited by: 21
Author(s): Ting Zhang, Antony R. Warden, Yiyang Li, Yiyang Li
Software Mentions: 4
Published: about 4 years ago

10.18632/oncotarget.11038

Role of the immune system in the peritoneal tumor spread of high grade serous ovarian cancer
Cited by: 33
Author(s): Katharina Auer, Anna Bachmayr-Heyda, Nyamdelger Sukhbaatar, Stefanie Aust, Klaus G. Schmetterer, Samuel M. Meier, Christopher Gerner, Christoph Grimm, Reinhard Horvat, Dietmar Pils
Software Mentions: 4
Published: over 8 years ago

10.1186/s12920-019-0605-5

Prediction of comorbid diseases using weighted geometric embedding of human interactome
Cited by: 8
Author(s): Pakeeza Akram, Li Liao
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12918-019-0694-y

GNE: a deep learning framework for gene network inference by aggregating biological information
Cited by: 29
Author(s): Kishan Kc, Rui Li, Feng Cui, Qi Yu, Anne R. Haake
Software Mentions: 4
Published: over 5 years ago

10.1186/1471-2105-11-567

Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data
Cited by: 67
Author(s): Christoph Bartenhagen, Hans-Ulrich Klein, Christian Rückert, Xiaoyi Jiang, Martin Dugas
Software Mentions: 3
Published: about 14 years ago

10.1186/s12920-017-0245-6

Comprehensive discovery of subsample gene expression components by information explanation: therapeutic implications in cancer
Cited by: 17
Author(s): Shirley Pepke, Greg Ver Steeg
Software Mentions: 3
Published: over 7 years ago

10.1155/2019/8106073

Context Attention Heterogeneous Network Embedding
Cited by: 7
Author(s): Wei Zhuo, Qianyi Zhan, Yuan Liu, Zhenping Xie, Jing Lü
Software Mentions: 3
Published: over 5 years ago

10.1186/1758-2946-6-20

Supervised extensions of chemography approaches: case studies of chemical liabilities assessment
Cited by: 3
Author(s): Svetlana I. Ovchinnikova, A.A. Bykov, А. Yu. Tsivadze, E. P. D’yachkov, Natalia Kireeva
Software Mentions: 3
Published: over 10 years ago

10.1093/bioinformatics/bty664

GPseudoRank: a permutation sampler for single cell orderings
Cited by: 10
Author(s): Magdalena E Strauß, John E. Reid, Lorenz Wernisch
Software Mentions: 3
Published: over 6 years ago

10.1371/journal.pone.0238915

Graph embedding-based novel protein interaction prediction via higher-order graph convolutional network
Cited by: 25
Author(s): Zewen Xiao, Yue Deng
Software Mentions: 3
Published: about 4 years ago

10.1098/rsos.181806

Accurate wisdom of the crowd from unsupervised dimension reduction
Cited by: 1
Author(s): Lingfei Wang, Tom Michoel
Software Mentions: 3
Published: over 5 years ago

10.1021/acs.chemrev.0c01195

Unsupervised Learning Methods for Molecular Simulation Data
Cited by: 140
Author(s): Aldo Glielmo, Brooke E. Husic, Álex Rodríguez, Cecilia Clementi, Frank Noé, Alessandro Laio
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pcbi.1008192

Nonlinear stimulus representations in neural circuits with approximate excitatory-inhibitory balance
Cited by: 17
Author(s): Cody Baker, Vicky Zhu, Robert Rosenbaum
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pcbi.1004396

Manifold Based Optimization for Single-Cell 3D Genome Reconstruction
Cited by: 32
Author(s): Jonas Paulsen, Odin Gramstad, Philippe Collas
Software Mentions: 2
Published: over 9 years ago

10.3390/ani10081406

Uniform Manifold Approximation and Projection for Clustering Taxa through Vocalizations in a Neotropical Passerine (Rough-Legged Tyrannulet, Phyllomyias burmeisteri)
Cited by: 18
Author(s): Ronald M Parra-Hernández, Jorge I Posada-Quintero, Orlando Acevedo‐Charry, Hugo F. Posada-Quintero
Software Mentions: 2
Published: over 4 years ago

10.1186/s12859-021-04314-1

CoSTA: unsupervised convolutional neural network learning for spatial transcriptomics analysis
Cited by: 15
Author(s): Yang Xu, Rachel Patton McCord
Software Mentions: 2
Published: over 3 years ago

10.3390/life11070638

Machine Learning Protocols in Early Cancer Detection Based on Liquid Biopsy: A Survey
Cited by: 23
Author(s): Linjing Liu, Xingjian Chen, Olutomilayo Olayemi Petinrin, Weitong Zhang, Saifur Rahaman, Zhi-Ri Tang, Ka-Chun Wong
Software Mentions: 2
Published: over 3 years ago

10.3390/ma10060582

Fault Diagnosis for Rolling Bearings under Variable Conditions Based on Visual Cognition
Cited by: 11
Author(s): Yujie Cheng, Bo Zhou, Chen Lu, Chao Yang
Software Mentions: 2
Published: over 7 years ago

10.3390/molecules24061075

Predicting Ewing Sarcoma Treatment Outcome Using Infrared Spectroscopy and Machine Learning
Cited by: 11
Author(s): Radosław Chaber, Christopher J. Arthur, Kornelia Łach, Anna Raciborska, Elżbieta Michalak, Katarzyna Bilska, Katarzyna Drabko, Joanna Depciuch, Ewa Kaznowska, J. Cebulski
Software Mentions: 2
Published: over 5 years ago

10.3390/molecules25051146

Evaluating Autoencoder-Based Featurization and Supervised Learning for Protein Decoy Selection
Cited by: 8
Author(s): Fardina Fathmiul Alam, Taseef Rahman, Amarda Shehu
Software Mentions: 2
Published: over 4 years ago

10.3390/ph13090253

Data-Driven Molecular Dynamics: A Multifaceted Challenge
Cited by: 21
Author(s): Mattia Bernetti, Martina Bertazzo, Matteo Masetti
Software Mentions: 2
Published: about 4 years ago

10.1155/2015/198363

A Review of Feature Selection and Feature Extraction Methods Applied on Microarray Data
Cited by: 616
Author(s): Zena M. Hira, Donald Gillies
Software Mentions: 2
Published: over 9 years ago

10.1371/journal.pone.0233755

A Geometric Clustering Tool (AGCT) to robustly unravel the inner cluster structures of time-series gene expressions
Cited by: 3
Author(s): Richard Nock, Natalia Polouliakh, Frank Nielsen, Keigo Oka, Carlin R. Connell, Cedric Heimhofer, Kazuhiro Shibanai, Samik Ghosh, Ken‐ichi Aisaki, Satoshi Kitajima, Jun Kanno, Taketo Akama, Hiroaki Kitano
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0090562

An algorithm for finding biologically significant features in microarray data based on a priori manifold learning.
Cited by: 6
Author(s): Zena M. Hira, George Trigeorgis, Donald Gillies
Software Mentions: 2
Published: almost 11 years ago

10.1371/journal.pone.0004203

Similarity Measures for Protein Ensembles
Cited by: 64
Author(s): Kresten Lindorff‐Larsen, Jesper Ferkinghoff‐Borg
Software Mentions: 2
Published: almost 16 years ago

10.1038/s42003-020-01262-z

Machine learning assistive rapid, label-free molecular phenotyping of blood with two-dimensional NMR correlational spectroscopy
Cited by: 21
Author(s): Weng Kung Peng, Tian-Tsong Ng, Tze Ping Loh
Software Mentions: 2
Published: about 4 years ago

10.3389/fncom.2019.00094

Comparing Cyclicity Analysis With Pre-established Functional Connectivity Methods to Identify Individuals and Subject Groups Using Resting State fMRI
Cited by: 5
Author(s): Somayeh Shahsavarani, Ivan T. Abraham, Benjamin Zimmerman, Yuliy Baryshnikov, Fatima T. Husain
Software Mentions: 2
Published: almost 5 years ago

10.3389/fnhum.2019.00430

Using Low-Dimensional Manifolds to Map Relationships Between Dynamic Brain Networks
Cited by: 12
Author(s): Mohsen Bahrami, Robert G. Lyday, Ramon Casanova, Jonathan H. Burdette, Sean L. Simpson, Paul J. Laurienti
Software Mentions: 2
Published: almost 5 years ago

10.3389/fpls.2021.604510

Combining Multi-Dimensional Convolutional Neural Network (CNN) With Visualization Method for Detection of Aphis gossypii Glover Infection in Cotton Leaves Using Hyperspectral Imaging
Cited by: 32
Author(s): Tianying Yan, Wei Xu, Lin Jiao, Long Duan, Pan Gao, Chu Zhang, Xin Lv
Software Mentions: 2
Published: almost 4 years ago

10.1186/s13059-015-0805-z

ZIFA: Dimensionality reduction for zero-inflated single-cell gene expression analysis
Cited by: 544
Author(s): Emma Pierson, Christopher Yau
Software Mentions: 2
Published: about 9 years ago

10.1186/s13059-016-0975-3

SLICER: inferring branched, nonlinear cellular trajectories from single cell RNA-seq data
Cited by: 153
Author(s): Joshua D. Welch, Alexander J. Hartemink, Jan F. Prins
Software Mentions: 2
Published: over 8 years ago

10.1002/jcc.23643

Visualizing energy landscapes with metric disconnectivity graphs
Cited by: 24
Author(s): Lewis C. Smeeton, Mark T. Oakley, Roy L. Johnston
Software Mentions: 2
Published: over 10 years ago

10.1126/sciadv.aax3770

A trainable clustering algorithm based on shortest paths from density peaks
Cited by: 16
Author(s): Diego Ulisse Pizzagalli, Santiago F. González, Rolf Krause
Software Mentions: 2
Published: about 5 years ago

10.1038/s41598-020-68858-7

Inferring disease subtypes from clusters in explanation space
Cited by: 16
Author(s): Marc-André Schulz, Matt Chapman-Rounds, Manisha Verma, Danilo Bzdok, Konstantinos Georgatzis
Software Mentions: 2
Published: over 4 years ago

10.3390/s21072483

Appearance-Based Sequential Robot Localization Using a Patchwise Approximation of a Descriptor Manifold
Cited by: 5
Author(s): Alberto Jaenal, Francisco-Ángel Moreno, Javier González-Jiménez
Software Mentions: 2
Published: over 3 years ago

10.1186/s40064-016-2888-8

A preliminary review of influential works in data-driven discovery
Cited by: 6
Author(s): Mark A. Stalzer, Chris Mentzel
Software Mentions: 2
Published: over 8 years ago

10.1371/journal.pone.0091131

Unraveling Flow Patterns through Nonlinear Manifold Learning
Cited by: 16
Author(s): Flavia Tauro, Salvatore Grimaldi, Maurizio Porfiri
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.pone.0025684

The Simian Immunodeficiency Virus Targets Central Cell Cycle Functions through Transcriptional Repression In vivo
Cited by: 3
Author(s): Carl-Magnus Högerkorp, Yoshiaki Nishimura, Ki Duk Song, Malcolm A. Martin, Mario Roederer
Software Mentions: 1
Published: about 13 years ago

10.3390/children7100182

An Autoencoder-Based Deep Learning Classifier for Efficient Diagnosis of Autism
Cited by: 28
Author(s): Harshini Sewani, Rasha Kashef
Software Mentions: 1
Published: about 4 years ago

10.1371/journal.pone.0050474

Visual to Parametric Interaction (V2PI)
Cited by: 46
Author(s): Scotland Leman, Leanna House, Dipayan Maiti, Alex Endert, Chris North
Software Mentions: 1
Published: over 11 years ago

10.1038/s42003-018-0254-9

Regional protein expression in human Alzheimer’s brain correlates with disease severity
Cited by: 123
Author(s): Jiaolong Xu, Stefano Patassini, Nitin Rustogi, Isabel Riba-Garcia, Benjamin D. Hale, Alexander M. Phillips, Henry J. Waldvogel, Robert Haines, Phil Bradbury, Adam Stevens, Richard L.M. Faull, Andrew W. Dowsey, Garth J. S. Cooper, Richard D. Unwin
Software Mentions: 1
Published: almost 6 years ago

10.1186/s12859-017-1918-z

Detecting intermediate protein conformations using algebraic topology
Cited by: 8
Author(s): Nurit Haspel, Dong Luo, Eduardo González
Software Mentions: 1
Published: almost 7 years ago

10.1155/2016/6040232

Adaptive Shape Kernel-Based Mean Shift Tracker in Robot Vision System
Cited by: 5
Author(s): Chunmei Liu, Yirui Wang, Shangce Gao
Software Mentions: 1
Published: almost 9 years ago

10.1155/2014/373957

Candidates for Synergies: Linear Discriminants versus Principal Components
Cited by: 16
Author(s): Ramana Vinjamuri, Vrajeshri Patel, Michael Powell, Zhi-Hong Mao, Nathan E. Crone
Software Mentions: 1
Published: almost 11 years ago

10.1371/journal.pgen.1007837

regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors
Cited by: 24
Author(s): Gary Wilk, Rosemary Braun
Software Mentions: 1
Published: almost 6 years ago

10.1098/rstb.2013.0567

Conformations of macromolecules and their complexes from heterogeneous datasets
Cited by: 44
Author(s): Peter Schwander, Russell Fung, A. Ourmazd
Software Mentions: 1
Published: over 10 years ago

10.3390/e21020119

Complex Valued Risk Diversification
Cited by: 8
Author(s): Yusuke Uchiyama, Takanori Kadoya, Kei Nakagawa
Software Mentions: 1
Published: almost 6 years ago

10.1530/EJE-13-0069

A pharmacogenomic approach to the treatment of children with GH deficiency or Turner syndrome
Cited by: 27
Author(s): Peter E. Clayton, Pierre Chatelain, Luciano Tatò, Han‐Wook Yoo, Geoffrey Ambler, Alicia Belgorosky, Sofía Quinteiro, Cheri Deal, Adam Stevens, John Raelson, Pascale Croteau, Benoit Destenaves, C Olivier
Software Mentions: 1
Published: about 11 years ago

10.3389/fbioe.2020.00158

Interpreting Deep Learning Features for Myoelectric Control: A Comparison With Handcrafted Features
Cited by: 57
Author(s): Ulysse Côté-Allard, Evan Campbell, Angkoon Phinyomark, François Laviolette, Benoît Gosselin, Erik Scheme
Software Mentions: 1
Published: over 4 years ago

10.1093/ve/vez028

DISSEQT—DIStribution-based modeling of SEQuence space Time dynamics†
Cited by: 11
Author(s): Rasmus Henningsson, Gonzalo Moratorio, Antonio V. Bordería, Marco Vignuzzi, Magnus Fontes
Software Mentions: 1
Published: over 5 years ago

10.3389/fncel.2021.618658

Place Cells in Head-Fixed Mice Navigating a Floating Real-World Environment
Cited by: 14
Author(s): Mary Ann Go, Jake Rogers, Giuseppe P. Gava, Catherine E. Davey, Seigfred V. Prado, Yu Liu, Simon R. Schultz
Software Mentions: 1
Published: almost 4 years ago

10.1098/rsif.2014.0672

Mapping the stereotyped behaviour of freely moving fruit flies
Cited by: 405
Author(s): Gordon J Berman, Dahan Choi, William Bialek, Joshua W. Shaevitz
Software Mentions: 1
Published: about 10 years ago

10.3389/fncom.2014.00132

Modeling the shape hierarchy for visually guided grasping
Cited by: 1
Author(s): Omid Rezai, Ashley Kleinhans, Eduardo Matallanas, Ben Selby, Bryan Tripp
Software Mentions: 1
Published: about 10 years ago

10.3389/fncom.2021.616748

Evaluating State Space Discovery by Persistent Cohomology in the Spatial Representation System
Cited by: 9
Author(s): Louis Kang, Boyan Xu, Dmitriy Morozov
Software Mentions: 1
Published: over 3 years ago

10.3389/fncom.2015.00142

Editorial: Hierarchical Object Representations in the Visual Cortex and Computer Vision
Cited by: 5
Author(s): Antonio Jose Rodríguez-Sánchez, Mazyar Fallah, Aleš Leonardis
Software Mentions: 1
Published: about 9 years ago

10.5702/massspectrometry.A0094

Comparison of Dimensionality Reduction Methods in Mass Spectra of Astrocytoma and Glioblastoma Tissues
Cited by: 3
Author(s): Evgeny Zhvansky, Anatoly Sorokin, Vsevolod Shurkhay, Denis S. Zavorotnyuk, Denis S. Bormotov, Stanislav I. Pekov, А. А. Потапов, Evgeny N. Nikolaev, Igor Popov
Software Mentions: 1
Published: over 3 years ago

10.3390/jimaging5010005

Multi-Modal Medical Image Registration with Full or Partial Data: A Manifold Learning Approach
Cited by: 29
Author(s): Fereshteh S. Bashiri, Ahmadreza Baghaie, Reihaneh Rostami, Zeyun Yu, Roshan D’Souza
Software Mentions: 1
Published: almost 6 years ago

10.3389/fmolb.2019.00076

Editorial: Machine Learning in Biomolecular Simulations
Cited by: 4
Author(s): Gennady M. Verkhivker, Vojtêch Spiwok, Francesco Luigi Gervasio
Software Mentions: 1
Published: about 5 years ago

10.1007/s40708-015-0022-2

The intrinsic geometry of the human brain connectome
Cited by: 25
Author(s): Allen Q. Ye, Olusola Ajilore, Giorgio Conte, Johnson J. GadElkarim, Galen Thomas-Ramos, Liang Zhan, Shaolin Yang, Anand Kumar, Richard L. Magin, Angus G. Forbes, Alex D. Leow
Software Mentions: 1
Published: about 9 years ago

10.3389/fnana.2015.00068

Quantitative neuroanatomy of all Purkinje cells with light sheet microscopy and high-throughput image analysis
Cited by: 34
Author(s): Ludovico Silvestri, Marco Paciscopi, Paolo Soda, Filippo Biamonte, Giulio Iannello, Paolo Frasconi, Francesco S. Pavone
Software Mentions: 1
Published: over 9 years ago

10.3389/fneur.2014.00070

Primary Motor Cortex Neurons during Individuated Finger and Wrist Movements: Correlation of Spike Firing Rates with the Motion of Individual Digits versus Their Principal Components
Cited by: 18
Author(s): Evan Kirsch, Gil Rivlis, Marc H. Schieber
Software Mentions: 1
Published: over 10 years ago

10.3389/fnbot.2013.00011

Incremental learning of skill collections based on intrinsic motivation
Cited by: 19
Author(s): Jan Hendrik Metzen, Frank Kirchner
Software Mentions: 1
Published: almost 12 years ago

10.3389/fnins.2018.00803

Statistical Shape Analysis of Large Datasets Based on Diffeomorphic Iterative Centroids
Cited by: 5
Author(s): Claire Cury, Joan Alexis Glaunès, Roberto Toro, Marie Chupin, Günter Schumann, Vincent Frouin, Jean‐Baptiste Poline, Olivier Colliot
Software Mentions: 1
Published: about 6 years ago

10.7554/eLife.19153

Cilia-mediated Hedgehog signaling controls form and function in the mammalian larynx
Cited by: 58
Author(s): Jacqueline M. Tabler, Maggie M. Rigney, Gordon J Berman, Swetha Gopalakrishnan, Églantine Heude, Hadeel Adel Al-Lami, Basil Z Yannakoudakis, Rebecca D. Fitch, Christopher M. Carter, Steven A. Vokes, Karen Liu, Shahragim Tajbakhsh, SE Roian Egnor, John B. Wallingford
Software Mentions: 1
Published: almost 8 years ago

10.3389/fpsyg.2017.00548

Gaze Behavior Consistency among Older and Younger Adults When Looking at Emotional Faces
Cited by: 23
Author(s): Laurence Chaby, Isabelle Hupont, Marie Avril, Viviane Luherne-du Boullay, Mohamed Chétouani
Software Mentions: 1
Published: over 7 years ago

10.7554/eLife.06134

A thesaurus for a neural population code
Cited by: 47
Author(s): Elad Ganmor, Ronen Segev, Elad Schneidman
Software Mentions: 1
Published: about 9 years ago

10.1186/1471-2105-12-248

PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome
Cited by: 19
Author(s): Jiajie Zhang, Amir Madany Mamlouk, Thomas Martinetz, Suhua Chang, Jing Wang, Rolf Hilgenfeld
Software Mentions: 1
Published: over 13 years ago

10.1093/bioinformatics/btab336

Investigation of REFINED CNN ensemble learning for anti-cancer drug sensitivity prediction
Cited by: 9
Author(s): Omid Bazgir, Souparno Ghosh, Ranadip Pal
Software Mentions: 1
Published: over 3 years ago

10.1186/s12874-021-01265-2

Utilizing machine learning dimensionality reduction for risk stratification of chest pain patients in the emergency department
Cited by: 5
Author(s): Nan Liu, Marcel Lucas Chee, Zhi Xiong Koh, Su Li Leow, Andrew Fu Wah Ho, Di Guo, Marcus Eng Hock Ong
Software Mentions: 1
Published: over 3 years ago

10.1186/1471-2105-6-195

Cited by: 48
Author(s): Kevin Dawson, Raymond L. Rodriguez, Wasyl Malyj
Software Mentions: 1
Published: almost 20 years ago

10.1098/rspa.2016.0809

Reduced-order modelling of parameter-dependent, linear and nonlinear dynamic partial differential equation models
Cited by: 11
Author(s): Akeel A. Shah, Xing Wei, Vasileios Triantafyllidis
Software Mentions: 1
Published: over 7 years ago

10.1186/1477-5956-10-S1-S1

Protein surface representation and analysis by dimension reduction
Cited by: 16
Author(s): Heng Yang, Rehman Qureshi, Ahmet Saçan
Software Mentions: 1
Published: over 12 years ago

10.1186/1471-2164-13-S8-S15

Automatically clustering large-scale miRNA sequences: methods and experiments
Cited by: 4
Author(s): Linxia Wan, Jiandong Ding, Ting Jin, Jihong Guan, Shuigeng Zhou
Software Mentions: 1
Published: almost 12 years ago

10.3390/ijms22095053

“Dividing and Conquering” and “Caching” in Molecular Modeling
Cited by: 4
Author(s): Xiaoyong Cao, Pu Tian
Software Mentions: 1
Published: over 3 years ago

10.1038/srep17960

Mapping Chemical Selection Pathways for Designing Multicomponent Alloys: an informatics framework for materials design
Cited by: 21
Author(s): Srikant Srinivasan, Scott Broderick, Ruifang Zhang, Amrita Mishra, Susan B. Sinnott, Surendra K. Saxena, James M. LeBeau, Krishna Rajan
Software Mentions: 1
Published: almost 9 years ago

10.1038/srep31377

Accurate Estimation of the Intrinsic Dimension Using Graph Distances: Unraveling the Geometric Complexity of Datasets
Cited by: 43
Author(s): Daniele Granata, Vincenzo Carnevale
Software Mentions: 1
Published: over 8 years ago

10.1038/s41598-018-33470-3

Distinguishing Ewing sarcoma and osteomyelitis using FTIR spectroscopy
Cited by: 19
Author(s): Radosław Chaber, Christopher J. Arthur, Joanna Depciuch, Kornelia Łach, Anna Raciborska, Elżbieta Michalak, J. Cebulski
Software Mentions: 1
Published: about 6 years ago

10.1186/s12859-017-1484-4

Nonlinear dimensionality reduction methods for synthetic biology biobricks’ visualization
Cited by: 3
Author(s): Jiaoyun Yang, Haipeng Wang, Huitong Ding, Ning An, Gil Alterovitz
Software Mentions: 1
Published: almost 8 years ago

10.1155/2014/208094

Features Extraction of Flotation Froth Images and BP Neural Network Soft-Sensor Model of Concentrate Grade Optimized by Shuffled Cuckoo Searching Algorithm
Cited by: 5
Author(s): Jiesheng Wang, Shuang Han, Na-na Shen, Shuxia Li
Software Mentions: 1
Published: almost 11 years ago

10.3390/s111009573

Facial Expression Recognition Based on Local Binary Patterns and Kernel Discriminant Isomap
Cited by: 100
Author(s): Xiaoming Zhao, Shiqing Zhang
Software Mentions: 1
Published: about 13 years ago

10.3390/s140610562

Diffusion Maps for Multimodal Registration
Cited by: 18
Author(s): Gemma Piella
Software Mentions: 1
Published: over 10 years ago

10.3390/s17112477

Fault Detection of Bearing Systems through EEMD and Optimization Algorithm
Cited by: 29
Author(s): Dong−Han Lee, Jong-Hyo Ahn, Bong-Hwan Koh
Software Mentions: 1
Published: about 7 years ago

10.3390/s19092151

A Novel Health Indicator Based on Cointegration for Rolling Bearings’ Run-To-Failure Process
Cited by: 8
Author(s): Hong‐Ru Li, Yaolong Li, He Yu
Software Mentions: 1
Published: over 5 years ago

10.3390/s20143949

Deep-Learning-Based Methodology for Fault Diagnosis in Electromechanical Systems
Cited by: 22
Author(s): Francisco Arellano-Espitia, Miguel Delgado-Prieto, Victor Martinez-Viol, Juan José Saucedo-Dorantes, Roque Alfredo Osornio-Ríos
Software Mentions: 1
Published: over 4 years ago

Projects: pypi: Isomap

Papers Mentioning Isomap 115