Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2021.655536

https://doi.org/10.3389/fgene.2021.655536

Cited by: 30
Author(s): Jiajia Li, Zusen Fan, Weiling Zhao, Xiaobo Zhou
Published: almost 3 years ago

Software Mentions 12

bioconductor: GENIE3
GEne Network Inference with Ensemble of trees
Papers that mentioned: 172
bioconductor: HMMcopy
Copy number prediction with correction for GC and mappability bias for HTS data
Papers that mentioned: 18
bioconductor: Oscope
Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq
Papers that mentioned: 11
cran: ccRemover
Removes the Cell-Cycle Effect from Single-Cell RNA-Sequencing Data
Papers that mentioned: 5
cran: DDRTree
Learning Principal Graphs with DDRTree
Papers that mentioned: 42
cran: SAVER
Single-Cell RNA-Seq Gene Expression Recovery
Papers that mentioned: 40
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: CellPhoneDB
Inferring cell-cell communication.
Papers that mentioned: 89
pypi: cyclops
cyclops is a high-performance gateway for sentry.
Papers that mentioned: 1
pypi: Ginkgo
Lightweight service framework
Papers that mentioned: 39
pypi: Harmony
Harmony Programming Language
Papers that mentioned: 504
pypi: Isomap
Deriving faces
Papers that mentioned: 115