Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12920-019-0578-4

https://doi.org/10.1186/s12920-019-0578-4

Deconvolution of transcriptomes and miRNomes by independent component analysis provides insights into biological processes and clinical outcomes of melanoma patients

Cited by: 21
Author(s): Petr V. Nazarov, Anke Wienecke-Baldacchino, Andreï Zinovyev, Urszula Czerwińska, Arnaud Muller, Dorothée Nashan, Gunnar Dittmar, Francisco Azuaje, Stephanie Kreis
Published: over 5 years ago

Software Mentions 14

bioconductor: RDRToolbox
A package for nonlinear dimension reduction with Isomap and LLE.
Papers that mentioned: 7
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
bioconductor: topGO
Enrichment Analysis for Gene Ontology
Papers that mentioned: 652
cran: doMC
Foreach Parallel Adaptor for 'parallel'
Papers that mentioned: 27
cran: doSNOW
Foreach Parallel Adaptor for the 'snow' Package
Papers that mentioned: 19
cran: fastICA
FastICA Algorithms to Perform ICA and Projection Pursuit
Papers that mentioned: 56
cran: lle
Locally linear embedding
Papers that mentioned: 4
cran: NMF
Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: tsne
T-Distributed Stochastic Neighbor Embedding for R (t-SNE)
Papers that mentioned: 26
pypi: Isomap
Deriving faces
Papers that mentioned: 115
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690
pypi: tsne
TSNE algorithms
Papers that mentioned: 26