Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: xtable
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/xtable
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40 versions
Latest release: over 5 years ago
278 dependent packages
311,683 downloads last month
Papers Mentioning xtable 32
10.1371/journal.pcbi.1007912
bigPint: A Bioconductor visualization package that makes big data pint-sizedCited by: 3
Author(s): Lindsay Rutter, Dianne Cook
Software Mentions: 47
Published: over 4 years ago
10.1371/journal.pcbi.1000227
Analyzing ChIP-chip Data Using BioconductorCited by: 19
Author(s): Joern Toedling, Wolfgang Huber
Software Mentions: 39
Published: almost 16 years ago
10.1186/1751-0473-8-1
MmPalateMiRNA, an R package compendium illustrating analysis of miRNA microarray dataCited by: 11
Author(s): Guy Brock, Partha Mukhopadhyay, Vasyl Pihur, Cynthia L. Webb, Robert M. Greene, M. Michele Pisano
Software Mentions: 24
Published: almost 12 years ago
10.1186/1756-0500-3-277
EMA - A R package for Easy Microarray data analysisCited by: 45
Author(s): Nicolas Servant, Eléonore Gravier, Pierre Gestraud, Cécile Laurent, Caroline Paccard, Anne Biton, Isabel Martínez Brito, Jonas Mandel, Bernard Asselain, Emmanuel Barillot, Philippe Hupé
Software Mentions: 20
Published: about 14 years ago
10.1371/journal.pone.0140989
The Increase in Animal Mortality Risk following Exposure to Sparsely Ionizing Radiation Is Not Linear Quadratic with DoseCited by: 35
Author(s): Benjamin Haley, Tatjana Paunesku, David J. Grdina, Gayle E. Woloschak
Software Mentions: 13
Published: almost 9 years ago
10.3934/mbe.2020007
Development of a tissue augmented Bayesian model for expression quantitative trait loci analysisCited by: 1
Author(s): Yonghua Zhuang, Kristen J. Wade, Laura Saba, Katerina Kechris
Software Mentions: 13
Published: almost 5 years ago
10.1186/s12936-016-1124-x
Consistent prevalence of asymptomatic infections in malaria endemic populations in Colombia over timeCited by: 21
Author(s): Juan M. Vásquez-Jiménez, Myriam Arévalo‐Herrera, Juliana Henao-Giraldo, Karen Molina-Gómez, María Isabel Arce-Plata, Andrés F. Vallejo, Sócrates Herrera
Software Mentions: 12
Published: almost 9 years ago
10.1080/21623945.2019.1697563
Modelling the gene expression and the DNA-binding in the 3T3-L1 differentiating adipocytesCited by: 6
Author(s): Mahmoud Ahmed, Deok Ryong Kim
Software Mentions: 11
Published: almost 6 years ago
10.1186/1756-0500-3-10
A collection of bioconductor methods to visualize gene-list annotationsCited by: 46
Author(s): Gang Feng, Pan Du, Nancy L. Krett, Michael A. Tessel, Steven T. Rosen, Warren A. Kibbe, Simon Lin
Software Mentions: 11
Published: almost 15 years ago
10.1371/journal.pone.0191206
Prognostic relevance of elevated pulmonary arterial pressure assessed non-invasively: Analysis in a large patient cohort with invasive measurements in near temporal proximityCited by: 3
Author(s): Steffen Greiner, Andreas Jud, Matthias Aurich, Christoph Geisenberger, Lorenz Uhlmann, Thomas Hilbel, Meinhard Kieser, Hugo A. Katus, Derliz Mereles
Software Mentions: 10
Published: almost 7 years ago
10.1038/s42003-020-1087-x
Combining host-derived biomarkers with patient characteristics improves signature performance in predicting tuberculosis treatment outcomesCited by: 12
Author(s): Dhanasekaran Sivakumaran, Synne Jenum, Mário Vaz, Sumithra Selvam, Tom H. M. Ottenhoff, Mariëlle C. Haks, Stephanus T. Malherbe, Nancy Devlin, Christian Ritz, Harleen M. S. Grewal
Software Mentions: 10
Published: over 4 years ago
10.1371/journal.pone.0190195
Additional statistical and graphical methods for analyzing site formation processes using artifact orientationsCited by: 39
Author(s): Shannon P. McPherron
Software Mentions: 9
Published: almost 7 years ago
10.5811/westjem.2016.5.29957
Emergency Department Length of Stay for Maori and European Patients in New ZealandCited by: 6
Author(s): D Prisk, Godfrey Aj, Amy E. Lawrence
Software Mentions: 9
Published: over 8 years ago
10.7717/peerj.4473
pcr: an R package for quality assessment, analysis and testing of qPCR dataCited by: 72
Author(s): Mahmoud Ahmed, Deok Ryong Kim
Software Mentions: 9
Published: over 6 years ago
10.3390/jintelligence6030030
The Relation of Personality and Intelligence—What Can the Brunswik Symmetry Principle Tell Us?Cited by: 80
Author(s): André Kretzschmar, Marion Spengler, Anna‐Lena Schubert, Ricarda Steinmayr, Matthias Ziegler
Software Mentions: 9
Published: over 6 years ago
10.1371/journal.pntd.0007185
Ebola virus disease-related stigma among survivors declined in Liberia over an 18-month, post-outbreak period: An observational cohort studyCited by: 21
Author(s): John D. Kelly, Sheri D. Weiser, Barthalomew Wilson, Joseph B. Cooper, Meekie Glayweon, Michael C. Sneller, Clara Drew, Wayne T. Steward, Cavan Reilly, Kumblytee Johnson, Mosoka Fallah
Software Mentions: 7
Published: over 5 years ago
10.1002/bimj.201900155
A comparison of the beta‐geometric model with landmarking for dynamic prediction of time to pregnancyCited by: 1
Author(s): Rik van Eekelen, Hein Putter, David J. McLernon, Marinus J.C. Eijkemans, Nan van Geloven
Software Mentions: 7
Published: about 5 years ago
10.3390/jcm10173971
A Target for Increased Mortality Risk in Critically Ill Patients: The Concept of PerpetuityCited by: 1
Author(s): Jarrod Mosier, Julia M. Fisher, Cameron Hypes, Edward J. Bedrick, Elizabeth Salvagio Campbell, Karen Lutrick, Charles B. Cairns
Software Mentions: 7
Published: about 3 years ago
10.1186/s12882-018-0995-1
Low agreement between modified-Schwartz and CKD-EPI eGFR in young adults: a retrospective longitudinal cohort studyCited by: 15
Author(s): Michael Webster‐Clark, Byron C. Jaeger, Yi Zhong, Guido Filler, Ana Catalina Álvarez-Elías, Nora Franceschini, Maria Ferris
Software Mentions: 7
Published: over 6 years ago
10.1186/1471-2105-14-145
Quality control, analysis and secure sharing of Luminex® immunoassay data using the open source LabKey Server platformCited by: 10
Author(s): Josh Eckels, Cory Nathe, Elizabeth Nelson, Sara G Shoemaker, Elizabeth Van Nostrand, Nicole L. Yates, Vicki C. Ashley, Linda J. Harris, Mark Bollenbeck, Youyi Fong, Georgia D. Tomaras, Britt Piehler
Software Mentions: 7
Published: over 11 years ago
10.1093/jrr/rrv022
Prognostic factors, patterns of recurrence and toxicity for patients with esophageal cancer undergoing definitive radiotherapy or chemo-radiotherapyCited by: 19
Author(s): Matthias F. Haefner, Kristin Lang, David Krug, Stefan A. Koerber, Lorenz Uhlmann, Meinhard Kieser, Jürgen Debus, Florian Sterzing
Software Mentions: 5
Published: over 9 years ago
10.1186/s12874-018-0574-y
Hypothesis testing in Bayesian network meta-analysisCited by: 12
Author(s): Lorenz Uhlmann, Katrin Jensen, Meinhard Kieser
Software Mentions: 5
Published: about 6 years ago
10.1186/cc13824
Prediction of mortality in adult patients with severe acute lung failure receiving veno-venous extracorporeal membrane oxygenation: a prospective observational studyCited by: 108
Author(s): Tone Bull Enger, Alois Philipp, Vibeke Videm, Matthias Lubnow, Alexander Wahba, Marcus Fischer, Çhristof Schmid, Thomas Bein, Thomas Müller
Software Mentions: 5
Published: almost 11 years ago
10.3389/fmicb.2017.00919
BSocial: Deciphering Social Behaviors within Mixed Microbial PopulationsCited by: 6
Author(s): Jessica Purswani, Rocío Romero-Záliz, Antonio Manuel Martín-Platero, Isabel M. Guisado, Jesús González‐López, Clementina Pozo
Software Mentions: 5
Published: over 7 years ago
10.1186/s13014-017-0863-3
Intensity-modulated versus 3-dimensional conformal radiotherapy in the definitive treatment of esophageal cancer: comparison of outcomes and acute toxicityCited by: 24
Author(s): Matthias F. Haefner, Kristin Lang, Vivek Verma, Stefan A. Koerber, Lorenz Uhlmann, Jürgen Debus, Florian Sterzing
Software Mentions: 5
Published: over 7 years ago
10.3390/metabo3020412
CASMI: And the Winner is . . .Cited by: 30
Author(s): Emma L. Schymanski, Steffen Neumann
Software Mentions: 4
Published: over 11 years ago
10.1186/s12983-019-0345-6
Characteristics of tiger moth (Erebidae: Arctiinae) anti-bat sounds can be predicted from tymbal morphologyCited by: 7
Author(s): Nicolas J. Dowdy, William E. Conner
Software Mentions: 4
Published: almost 5 years ago
10.1371/journal.pone.0237217
Catastrophic health expenditures arising from out-of-pocket payments: Evidence from South African income and expenditure surveysCited by: 19
Author(s): Steven F. Koch, Naomi Setshegetso
Software Mentions: 4
Published: over 4 years ago
10.1186/s40001-017-0284-7
Fully digital data processing during cardiovascular implantable electronic device follow-up in a high-volume tertiary centerCited by: 0
Author(s): Ingo Staudacher, Asha Roy Nalpathamkalam, Lorenz Uhlmann, Claudius Illg, Sebastian Seehausen, Mohammadreza Akhavanpoor, Anke Buchauer, Nicolas Geis, Patrick Lugenbiel, Patrick Schweizer, Panagiotis Xynogalos, Maura M. Zylla, Eberhard Scholz, Edgar Zitron, Hugo A. Katus, Dierk Thomas
Software Mentions: 4
Published: about 7 years ago
10.1371/journal.pone.0111407
Whole Transcriptome Profiling of Maize during Early Somatic Embryogenesis Reveals Altered Expression of Stress Factors and Embryogenesis-Related GenesCited by: 82
Author(s): Stella Salvo, Candice N. Hirsch, C. Robin Buell, Shawn M. Kaeppler, Heidi F. Kaeppler
Software Mentions: 3
Published: about 10 years ago
10.1371/journal.pcbi.1004382
Flexible Modeling of Epidemics with an Empirical Bayes FrameworkCited by: 102
Author(s): Logan Brooks, David Farrow, Sangwon Hyun, Ryan J. Tibshirani, Roni Rosenfeld
Software Mentions: 3
Published: about 9 years ago
10.3389/fvets.2021.698159
Biomechanical Comparison of Tibial Plateau Leveling Osteotomy Performed With a Novel Titanium Alloy Locking Plate Construct vs. an Established Stainless-Steel Locking Plate ConstructCited by: 1
Author(s): Seth Bleakley, Ross H. Palmer, Nate Miller, Kirk C. McGilvray, S. Tepic
Software Mentions: 2
Published: about 3 years ago