Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fcell.2020.577125

https://doi.org/10.3389/fcell.2020.577125

Cited by: 11
Author(s): Zhiwen Luo, Xiao Chen, Yefan Zhang, Zhen Huang, Hong Zhao, Jianjun Zhao, Zhiyu Li, Jianguo Zhou, Jianmei Liu, Jianqiang Cai, Xinyu Bi
Published: over 3 years ago

Software Mentions 26

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: GOSemSim
GO-terms Semantic Similarity Measures
Papers that mentioned: 118
bioconductor: sva
Surrogate Variable Analysis
Papers that mentioned: 511
cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
cran: doMC
Foreach Parallel Adaptor for 'parallel'
Papers that mentioned: 27
cran: e1071
Misc Functions of the Department of Statistics, Probability Theory Group (Formerly: E1071), TU Wien
Papers that mentioned: 419
cran: foreign
Read Data Stored by 'Minitab', 'S', 'SAS', 'SPSS', 'Stata', 'Systat', 'Weka', 'dBase', ...
Papers that mentioned: 94
cran: forestplot
Advanced Forest Plot Using 'grid' Graphics
Papers that mentioned: 146
cran: ggDCA
Calculate and Plot Decision Curve
Papers that mentioned: 5
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: glmnet
Lasso and Elastic-Net Regularized Generalized Linear Models
Papers that mentioned: 1,607
cran: kernlab
Kernel-Based Machine Learning Lab
Papers that mentioned: 157
cran: party
A Laboratory for Recursive Partytioning
Papers that mentioned: 76
cran: pec
Prediction Error Curves for Risk Prediction Models in Survival Analysis
Papers that mentioned: 56
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: randomForest
Breiman and Cutler's Random Forests for Classification and Regression
Papers that mentioned: 1,447
cran: randomForestSRC
Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC)
Papers that mentioned: 143
cran: regplot
Enhanced Regression Nomogram Plot
Papers that mentioned: 49
cran: rms
Regression Modeling Strategies
Papers that mentioned: 1,236
cran: RobustRankAggreg
Methods for Robust Rank Aggregation
Papers that mentioned: 57
cran: ROCR
Visualizing the Performance of Scoring Classifiers
Papers that mentioned: 596
cran: rpart
Recursive Partitioning and Regression Trees
Papers that mentioned: 431
cran: survival
Survival Analysis
Papers that mentioned: 1,690
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473
pypi: glmnet
Python wrapper for glmnet
Papers that mentioned: 1,607
pypi: survival
Add static script_dir() method to Path
Papers that mentioned: 1,690