Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/msb.20188636

https://doi.org/10.15252/msb.20188636

Unsupervised identification of disease states from high‐dimensional physiological and histopathological profiles

Cited by: 11
Author(s): Kenichi Shimada, Timothy J. Mitchison
Published: almost 6 years ago

Software Mentions 17

bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: affyio
Tools for parsing Affymetrix data files
Papers that mentioned: 5
bioconductor: BufferedMatrix
A matrix data storage object held in temporary files
Papers that mentioned: 1
bioconductor: BufferedMatrixMethods
Microarray Data related methods that utlize BufferedMatrix objects
Papers that mentioned: 3
cran: clue
Cluster Ensembles
Papers that mentioned: 10
cran: dbscan
Density-Based Spatial Clustering of Applications with Noise (DBSCAN) and Related Algorithms
Papers that mentioned: 49
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: KernSmooth
Functions for Kernel Smoothing Supporting Wand & Jones (1995)
Papers that mentioned: 34
cran: lavaan
Latent Variable Analysis
Papers that mentioned: 814
cran: pROC
Display and Analyze ROC Curves
Papers that mentioned: 1,740
cran: RCurl
General Network (HTTP/FTP/...) Client Interface for R
Papers that mentioned: 36
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036
pypi: clue
Cloudify development environment CLI
Papers that mentioned: 10
pypi: dbscan
Theoretically efficient and practical parallel DBSCAN
Papers that mentioned: 49
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: lm
End to End Language Model Pipeline built for training speed
Papers that mentioned: 267
pypi: res
res is a tiny command line HTTP client
Papers that mentioned: 6