Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1093/bioinformatics/bty149
https://doi.org/10.1093/bioinformatics/bty149
Cited by: 1,423
Author(s): Wouter De Coster, Svenn D’Hert, Darrin T. Schultz, Marc Cruts, Christine Van Broeckhoven
Published: about 6 years ago
Software Mentions 18
bioconductor: IONiseR
Quality Assessment Tools for Oxford Nanopore MinION dataPapers that mentioned: 2
pypi: biopython
Freely available tools for computational molecular biology.Papers that mentioned: 114
pypi: NanoComp
Comparing runs of Oxford Nanopore sequencing data and alignmentsPapers that mentioned: 5
pypi: NanoPlot
Plotting suite for Oxford Nanopore sequencing data and alignmentsPapers that mentioned: 90
pypi: NanoStat
Calculate statistics for Oxford Nanopore sequencing data and alignmentsPapers that mentioned: 20
pypi: pandas
Powerful data structures for data analysis, time series, and statisticsPapers that mentioned: 640
pypi: pycoQC
PycoQC computes metrics and generates interactive QC plots for Oxford Nanopore technologies sequencing dataPapers that mentioned: 9