Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1038/s41598-020-78469-x
https://doi.org/10.1038/s41598-020-78469-x
Cerina: systematic circRNA functional annotation based on integrative analysis of ceRNA interactions
Cited by: 14
Author(s): Jacob Cardenas, Uthra Balaji, Jin Gu
Published: about 4 years ago
Software Mentions 23
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
cran: fastcluster
Fast Hierarchical Clustering Routines for R and 'Python'Papers that mentioned: 36
cran: heatmaply
Interactive Cluster Heat Maps Using 'plotly' and 'ggplot2'Papers that mentioned: 45
cran: Pareto
The Pareto, Piecewise Pareto and Generalized Pareto DistributionPapers that mentioned: 4
cran: shinycssloaders
Add Loading Animations to a 'shiny' Output While It's RecalculatingPapers that mentioned: 14
cran: shinyjs
Easily Improve the User Experience of Your Shiny Apps in SecondsPapers that mentioned: 15
pypi: CIRCexplorer
A combined strategy to identify circular RNAs (circRNAs and ciRNAs)Papers that mentioned: 99
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing readsPapers that mentioned: 1,562