Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: shinyjs

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/shinyjs

Easily Improve the User Experience of Your Shiny Apps in Seconds
22 versions
Latest release: almost 3 years ago
223 dependent packages
73,409 downloads last month

Papers Mentioning shinyjs 15

Protocol for Identification and Removal of Doublets with DoubletDecon
Cited by: 7
Author(s): Erica A. K. DePasquale, Daniel Schnell, Kashish Chetal, Nathan Salomonis
Software Mentions: 25
Published: over 4 years ago

10.1038/s41598-020-78469-x

Cerina: systematic circRNA functional annotation based on integrative analysis of ceRNA interactions
Cited by: 14
Author(s): Jacob Cardenas, Uthra Balaji, Jin Gu
Software Mentions: 23
Published: about 4 years ago

10.1186/s12864-020-06832-3

Seamless integration of image and molecular analysis for spatial transcriptomics workflows
Cited by: 121
Author(s): Joseph Bergenstråhle, Ludvig Larsson, Joakim Lundeberg
Software Mentions: 20
Published: over 4 years ago

10.1016/j.scitotenv.2020.140792

ESPRES: A web application for interactive analysis of multiple pressures in aquatic ecosystems
Cited by: 4
Author(s): Ángel Údias, Alberto Pistocchi, Olga Vigiak, Bruna Grizzetti, F. Bouraoui, César Alfaro
Software Mentions: 18
Published: about 4 years ago

10.1186/s12859-020-03577-4

NASQAR: a web-based platform for high-throughput sequencing data analysis and visualization
Cited by: 38
Author(s): Ayman Yousif, Nizar Drou, Jillian Rowe, Mohammed Khalfan, Kristin C. Gunsalus
Software Mentions: 17
Published: over 4 years ago

10.3389/fgene.2021.719204

RetroScan: An Easy-to-Use Pipeline for Retrocopy Annotation and Visualization
Cited by: 2
Author(s): Zhaoyuan Wei, Jiahe Sun, Qinhui Li, Ting Yao, Haiyue Zeng, Yi Wang
Software Mentions: 16
Published: over 3 years ago

10.2196/16810

Blockchain-Authenticated Sharing of Genomic and Clinical Outcomes Data of Patients With Cancer: A Prospective Cohort Study
Cited by: 29
Author(s): Benjamin S. Glicksberg, Shohei Burns, R. Currie, A. Clark Griffin, Zhen Jane Wang, David Haussler, Theodore C. Goldstein, Eric A. Collisson
Software Mentions: 13
Published: almost 5 years ago

10.3389/fimmu.2016.00339

IMGT/StatClonotype for Pairwise Evaluation and Visualization of NGS IG and TR IMGT Clonotype (AA) Diversity or Expression from IMGT/HighV-QUEST
Cited by: 38
Author(s): Safa Aouinti, Véronique Giudicelli, Patrice Duroux, Dhafer Malouche, Sofia Kossida, Marie‐Paule Lefranc
Software Mentions: 11
Published: over 8 years ago

10.1093/gbe/evab028

sangeranalyseR: Simple and Interactive Processing of Sanger Sequencing Data in R
Cited by: 14
Author(s): Kuan-Hao Chao, Kirston Barton, Sarah Palmer, Robert Lanfear
Software Mentions: 10
Published: almost 4 years ago

10.1186/s12859-020-03669-1

TRIP - T cell receptor/immunoglobulin profiler
Cited by: 11
Author(s): Maria Th. Kotouza, Katerina Gemenetzi, Chrysi Galigalidou, Elisavet Vlachonikola, Nikolaos Pechlivanis, Andreas Agathangelidis, Raphael Sandaltzopoulos, Pericles A. Mitkas, Kostas Stamatopoulos, Anastasia Chatzidimitriou, Fotis Psomopoulos
Software Mentions: 9
Published: about 4 years ago

10.12688/f1000research.27062.2

SAPHIR: a Shiny application to analyze tissue section images
Cited by: 0
Author(s): Elodie Germani, Hugues Lelouard, Mathieu Fallet
Software Mentions: 9
Published: over 3 years ago

10.1038/s41597-020-00731-8

CovidCounties is an interactive real time tracker of the COVID19 pandemic at the level of US counties
Cited by: 10
Author(s): Douglas Arneson, Matthew Elliott, Arman Mosenia, Boris Oskotsky, Samuel Solodar, Rohit Vashisht, Travis Zack, Paul A. Bleicher, Atul J. Butte, Vivek Rudrapatna
Software Mentions: 6
Published: about 4 years ago

10.1101/2020.04.28.20083279

CovidCounties - an interactive, real-time tracker of the COVID-19 pandemic at the level of US counties
Cited by: 1
Author(s): Douglas Arneson, Matthew Elliott, Arman Mosenia, Boris Oskotsky, Rohit Vashisht, Travis Zack, Paul A. Bleicher, Atul J. Butte, Vivek Rudrapatna
Software Mentions: 6
Published: over 4 years ago

10.7717/peerj.5031

Specalyzer—an interactive online tool to analyze spectral reflectance measurements
Cited by: 2
Author(s): Alexander Koc, Tina Henriksson, Aakash Chawade
Software Mentions: 6
Published: over 6 years ago

10.3390/cells10040751

DiseaseLinc: Disease Enrichment Analysis of Sets of Differentially Expressed LincRNAs
Cited by: 0
Author(s): Piyush More, Sweta Talyan, Jean-Fred Fontaine, Enrique M. Muro, Miguel A. Andrade‐Navarro
Software Mentions: 3
Published: over 3 years ago