Packages with Software Mentions in Scientific Papers

A normalization-invariant minimum enclosing ball method to detect differentially expressed genes for RNA-seq and scRNA-seq data
Papers that mentioned: 6

Very Likely Science (100)

cran: synthpop

Generating Synthetic Versions of Sensitive Microdata for Statistical Disclosure Control
Papers that mentioned: 6

Very Likely Science (85)

cran: insight

Easy Access to Model Information for Various Model Objects
Papers that mentioned: 6

Very Likely Science (100)

pypi: Elevator

On disk key/value store based on levelDB backend
Papers that mentioned: 6

Very Likely Science (65)

bioconductor: SBMLR

SBML-R Interface and Analysis Tools
Papers that mentioned: 6

Very Likely Science (100)

pypi: BIP

Bayesian Inference Tools for Python
Papers that mentioned: 6

Very Likely Science (75)

cran: BFS

Get Data from the Swiss Federal Statistical Office
Papers that mentioned: 6

Very Likely Science (93)

pypi: OSVM

Detection of Online Impersonation based on User Profiling in Social Networks through Optimized SVM
Papers that mentioned: 6

Very Likely Science (65)

pypi: svist4get

A simple visualization tool for genomic tracks from sequencing experiments
Papers that mentioned: 6

Very Likely Science (100)

pypi: ABBA

Tools for statistical analysis of A/B test results
Papers that mentioned: 6

Very Likely Science (75)

bioconductor: multiscan

R package for combining multiple scans
Papers that mentioned: 6

Very Likely Science (98)

pypi: synthpop

Population Synthesis
Papers that mentioned: 6

Very Likely Science (100)

pypi: pcd

Python Contract Decorators
Papers that mentioned: 6

Very Likely Science (65)

pypi: ng

Get password of the wifi you're connected, and your current ip address.
Papers that mentioned: 6

Very Likely Science (65)

pypi: Flat

Generative infrastructure for Python
Papers that mentioned: 6

Very Likely Science (80)

pypi: DomainFinder

Domain motion analysis for proteins
Papers that mentioned: 6

Very Likely Science (75)

pypi: fabia

Fabia Biclustering Algorithm
Papers that mentioned: 6

Very Likely Science (100)

pypi: emperor

Emperor
Papers that mentioned: 6

Very Likely Science (100)

pypi: SDST

Useful routines to perform NGS data analysis tasks
Papers that mentioned: 6

Very Likely Science (95)

pypi: https

Papers that mentioned: 6

Very Likely Science (65)

cran: RcppParallel

Parallel Programming Tools for 'Rcpp'
Papers that mentioned: 6

Very Likely Science (100)

pypi: Setup

Papers that mentioned: 6

Very Likely Science (65)

cran: MLeval

Machine Learning Model Evaluation
Papers that mentioned: 6

Very Likely Science (85)

pypi: mxnet

Apache MXNet is an ultra-scalable deep learning framework. This version uses openblas and MKLDNN.
Papers that mentioned: 6

Very Likely Science (100)

pypi: Pizza

a model project for a Python command-line script
Papers that mentioned: 6

Very Likely Science (85)

pypi: dis

A simple test
Papers that mentioned: 6

Very Likely Science (65)

pypi: logger

Python logging helper
Papers that mentioned: 6

Very Likely Science (65)

cran: shinythemes

Themes for Shiny
Papers that mentioned: 6

Very Likely Science (83)

cran: VFP

Variance Function Program
Papers that mentioned: 6

Very Likely Science (85)

cran: visualize

Graph Probability Distributions with User Supplied Parameters and Statistics
Papers that mentioned: 6

Very Likely Science (100)

pypi: Dixit

Fan server for the board game Dixit
Papers that mentioned: 6

Very Likely Science (60)

pypi: sent2vec

How to encode sentences in a high-dimensional vector space, a.k.a., sentence embedding.
Papers that mentioned: 6

Very Likely Science (65)

cran: RVtests

Rare Variant Tests
Papers that mentioned: 6

Very Likely Science (75)

pypi: natural

Convert data to their natural (human-readable) format
Papers that mentioned: 6

Very Likely Science (65)

cran: snpReady

Preparing Genotypic Datasets in Order to Run Genomic Analysis
Papers that mentioned: 6

Very Likely Science (85)

pypi: evolution

Papers that mentioned: 6

Very Likely Science (65)

pypi: PyAudio

Cross-platform audio I/O with PortAudio
Papers that mentioned: 6

Very Likely Science (65)

cran: WhiteStripe

White Matter Normalization for Magnetic Resonance Images
Papers that mentioned: 6

Very Likely Science (100)

cran: R2HTML

HTML Exportation for R Objects
Papers that mentioned: 6

Very Likely Science (95)

pypi: l

A project-oriented directory lister
Papers that mentioned: 6

Very Likely Science (65)

pypi: newick

A python module to read and write the Newick format
Papers that mentioned: 6

Very Likely Science (100)

pypi: ExAssist

Experiment Assist
Papers that mentioned: 6

Very Likely Science (90)

pypi: genetic

A versatile distributable genetic algorithm build with flexibility and ease of use in mind
Papers that mentioned: 6

Very Likely Science (100)

cran: psyphy

Functions for Analyzing Psychophysical Data in R
Papers that mentioned: 6

Very Likely Science (75)

pypi: deepnet

package for deep learning
Papers that mentioned: 6

Very Likely Science (75)

pypi: detect

detect OS and Python versions
Papers that mentioned: 6

Very Likely Science (65)

cran: SQUAREM

Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms
Papers that mentioned: 6

Very Likely Science (93)

pypi: Calendar

Calendrical calculation modules
Papers that mentioned: 6

Likely Science (40)

pypi: sense

Standard Sense utilities for Python
Papers that mentioned: 6

Very Likely Science (65)

pypi: home

Home automation by @d0ugal.
Papers that mentioned: 6

Very Likely Science (65)

pypi: neurosynth

Large-scale synthesis of functional neuroimaging data
Papers that mentioned: 6

Very Likely Science (100)

cran: natural

Estimating the Error Variance in a High-Dimensional Linear Model
Papers that mentioned: 6

Very Likely Science (93)

pypi: face

A command-line application framework (and CLI parser). Friendly for users, full-featured for developers.
Papers that mentioned: 6

Very Likely Science (65)

cran: RPPanalyzer

Reads, Annotates, and Normalizes Reverse Phase Protein Array Data
Papers that mentioned: 6

Very Likely Science (83)

pypi: ctypes

create and manipulate C data types in Python, call functions in shared libraries
Papers that mentioned: 6

Very Likely Science (65)

cran: qMRI

Methods for Quantitative Magnetic Resonance Imaging ('qMRI')
Papers that mentioned: 6

Very Likely Science (75)

cran: simecol

Simulation of Ecological (and Other) Dynamic Systems
Papers that mentioned: 6

Very Likely Science (85)

cran: RSE

Number of Newly Discovered Rare Species Estimation
Papers that mentioned: 6

Very Likely Science (75)

pypi: LaueTools

Distribution of LaueTools Package from gitlab.esrf.fr repository for pip
Papers that mentioned: 6

Very Likely Science (80)

cran: warbleR

Streamline Bioacoustic Analysis
Papers that mentioned: 6

Very Likely Science (95)

cran: ReacTran

Reactive Transport Modelling in 1d, 2d and 3d
Papers that mentioned: 6

Very Likely Science (85)

pypi: interaction

Python library for creating progress bars
Papers that mentioned: 6

Very Likely Science (65)

pypi: hapflk

haplotype-based test for differentiation in multiple populations
Papers that mentioned: 6

Very Likely Science (80)

pypi: engines

An SDK for interacting with Primer Engines
Papers that mentioned: 6

Very Likely Science (65)

pypi: Emulator

Python-Flask application to emulate IoT devices
Papers that mentioned: 6

Very Likely Science (65)

pypi: empower

Goodbye Inheritance
Papers that mentioned: 6

Very Likely Science (65)

pypi: DTL

Multiplatform tools development api
Papers that mentioned: 6

Very Likely Science (65)

pypi: ep

A tool to support an explicit contract between application and plaftorm
Papers that mentioned: 6

Very Likely Science (65)