Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: regtools

https://packages.ecosyste.ms/registries/pypi.org/packages/regtools

High-level Regression Utilities
5 versions
Latest release: almost 5 years ago
41 downloads last month

Papers Mentioning regtools 6

SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses
Cited by: 11
Author(s): Nicholas J. Eagles, Emily E. Burke, Jacob Leonard, Brianna K. Barry, Joshua M. Stolz, Louise A Huuki, BaDoi N. Phan, Violeta Larios Serrato, Everardo Gutiérrez-Millán, Israel Aguilar-Ordóñez, Andrew E. Jaffe, Leonardo Collado‐Torres
Software Mentions: 13
Published: over 3 years ago

10.1186/s13059-020-02071-7

Sierra: discovery of differential transcript usage from polyA-captured single-cell RNA-seq data
Cited by: 56
Author(s): Ralph Patrick, David T. Humphreys, Vaibhao Janbandhu, Alicia Oshlack, Joshua W. K. Ho, Richard P. Harvey, Kitty Lo
Software Mentions: 13
Published: over 4 years ago

10.1186/s12864-019-5927-3

Alternative polyadenylation produces multiple 3’ untranslated regions of odorant receptor mRNAs in mouse olfactory sensory neurons
Cited by: 5
Author(s): Mohamed Doulazmi, Cyril Cros, Isabelle Dusart, Alain Trembleau, Caroline Dubacq
Software Mentions: 6
Published: over 5 years ago

10.1128/mBio.02525-20

CRNKL1 Is a Highly Selective Regulator of Intron-Retaining HIV-1 and Cellular mRNAs
Cited by: 10
Author(s): Xianpei Han, Emanuel Wyler, Miha Milek, Bastian Grewe, Philipp Kirchner, Arif B. Ekici, Ana Beatriz Oliveira Villela Silva, Doris Jungnickl, Florian Full, Marco Thomas, Markus Landthaler, Armin Ensser, Klaus Überla
Software Mentions: 4
Published: over 3 years ago

10.1155/2016/4783841

Workflow for Genome-Wide Determination of Pre-mRNA Splicing Efficiency from Yeast RNA-seq Data
Cited by: 9
Author(s): Martin Převorovský, Martina Hálová, Kateřina Abrhámová, Jiří Libus, Petr Folk
Software Mentions: 3
Published: almost 9 years ago

10.1093/gigascience/giz099

The draft genome sequence of the spider Dysdera silvatica (Araneae, Dysderidae): A valuable resource for functional and evolutionary genomic studies in chelicerates
Cited by: 23
Author(s): José Francisco Sánchez-Herrero, Cristina Frías-López, Paula Escuer, Silvia Hinojosa-Álvarez, Miquel A. Arnedo, Alejandro Sánchez-Gracia, Julio Rozas
Software Mentions: 2
Published: over 5 years ago