pypi projects 9,932
pypi: pydna
Representing double stranded DNA and functions for simulating cloning and homologous recombination between DNA molecules.Papers that mentioned: 3
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pypi: validation
A library for runtime type checking and validation of python valuesPapers that mentioned: 3
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pypi: Naiad
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pypi: Pyrogram
Elegant, modern and asynchronous Telegram MTProto API framework in Python for users and botsPapers that mentioned: 3
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pypi: pykalman
An implementation of the Kalman Filter, Kalman Smoother, and EM algorithm in PythonPapers that mentioned: 3
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pypi: pygo
Needed to be installed to use the GO pygo package which allows calling python functions from GO langPapers that mentioned: 3
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pypi: Plim
Plim is a Python port of Ruby's Slim template language built on top of Mako TemplatesPapers that mentioned: 3
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pypi: PyFraME
PyFraME: Python framework for Fragment-based Multiscale EmbeddingPapers that mentioned: 3
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pypi: na
Functions and script to peek into the callable/argument structure of a set of callablesPapers that mentioned: 3
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pypi: promo
Library for manipulating pitch and duration in an algorithmic way, for resynthesizing speechPapers that mentioned: 3
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pypi: dredge
User-friendly thresholded subspace-constrained mean shift for geospatial dataPapers that mentioned: 3
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pypi: pyzbar
Read one-dimensional barcodes and QR codes from Python 2 and 3.Papers that mentioned: 3
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pypi: tax
A taxy Tox to tax your current site-packages. This is a variant of Tox that doesn't use virtualenvs at all - just installs everything in the current environment. Use at your own peril.Papers that mentioned: 3
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pypi: refgenie
Refgenie creates a standardized folder structure for reference genome files and indexes. You can download pre-built genomes or build your own for any fasta filePapers that mentioned: 3
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pypi: mahalanobis
Package for performing calculations of Mahalanobis distancesPapers that mentioned: 3
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pypi: osprey
|Build Status| |Coverage Status| |PyPi version| [|License|] (http://www.apache.org/licenses/LICENSE-2.0) |DOI| [|Documentation|] (http://msmbuilder.org/osprey)Papers that mentioned: 3
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pypi: SNPmatch
A simple python library to identify the most likely strain given the SNPs for a samplePapers that mentioned: 3
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pypi: quick
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pypi: drawer
Dynamically Re-applyable Aspect WEaveR — an implementation of dynamic aspect weaving in Python.Papers that mentioned: 3
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pypi: optlang
Formulate optimization problems using sympy expressions and solve them using interfaces to third-party optimization software (e.g. GLPK).Papers that mentioned: 3
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pypi: samba
A very small PaaS to do git push app deployments to your own servers, similar to HerokuPapers that mentioned: 3
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pypi: umitools
A toolset for handling sequencing data with unique molecular identifiers (UMIs)Papers that mentioned: 3
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pypi: tally
A Django application (and daemon) for collecting, storing, and aggregating metrics.Papers that mentioned: 3
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pypi: hivmmer
An alignment and variant-calling pipeline for Illumina deep sequencing of HIV-1, based on the probabilistic aligner HMMER.Papers that mentioned: 3
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pypi: SeedWaterSegmenter
graphical program to interactively segment image stacks of cells in tissue with edge-labels (aka. white outlines)Papers that mentioned: 3
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pypi: QuickFF
Python library to quickly derive force fields from ab initio training data.Papers that mentioned: 3
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pypi: Taxonome
Tools for working with information on species or other taxa.Papers that mentioned: 3
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