Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: PyParanoid

https://packages.ecosyste.ms/registries/pypi.org/packages/PyParanoid

Fast and scalable homolog detection for thousands of genomes
6 versions
Latest release: over 5 years ago
31 downloads last month

Papers Mentioning PyParanoid 3

10.1128/mSystems.00474-21
Metabolic Differentiation of Co-occurring Accumulibacter Clades Revealed through Genome-Resolved Metatranscriptomics
Cited by: 12
Author(s): Elizabeth A. McDaniel, Francisco Moya-Flores, Natalie K. Beach, Pamela Y. Camejo, Ben O. Oyserman, Matthew Kizaric, Eng Hoe Khor, Daniel R. Noguera, Katherine D. McMahon
Software Mentions: 9
Published: about 3 years ago
10.3389/fmicb.2021.598180
Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
Cited by: 14
Author(s): Dawn Chiniquy, Elle M. Barnes, Jizhong Zhou, Kyle Hartman, Xiaohui Li, Amy Sheflin, Allyn Pella, Ellen L. Marsh, Jessica E. Prenni, Adam M. Deutschbauer, Daniel P. Schachtman, Susannah G. Tringe
Software Mentions: 3
Published: over 3 years ago
10.1128/mBio.00575-20
Comparative Genomics Identified a Genetic Locus in Plant-Associated <i>Pseudomonas</i> spp. That Is Necessary for Induced Systemic Susceptibility
Cited by: 6
Author(s): Polina Beskrovnaya, Ryan A. Melnyk, Zhexian Liu, Yang Liu, M.A. Higgins, Yi Song, Katherine S. Ryan, Cara H. Haney
Software Mentions: 1
Published: over 4 years ago