pypi: stats | Projects | Ecosyste.ms: Papers

10.1038/s41396-019-0383-2

Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots
Cited by: 596
Author(s): Samiran Banerjee, Florian Walder, Lucie Büchi, Marion Meyer, Alain Held, Andreas Gattinger, Thomas Keller, Raphaël Charles, Marcel G. A. van der Heijden
Software Mentions: 8
Published: over 7 years ago

10.3389/fonc.2019.01243

Identification of Subtype-Specific Three-Gene Signature for Prognostic Prediction in Diffuse Type Gastric Cancer
Cited by: 12
Author(s): Bowen Bao, Chunlei Zheng, Bowen Yang, Yue Jin, Kezuo Hou, Zhi Li, Xueying Zheng, Shitong Yu, Xiaojie Zhang, Yibo Fan, Xiujuan Qu, Yunpeng Liu, Xiaofang Che
Software Mentions: 8
Published: almost 7 years ago

10.1186/s12864-020-6653-6

Novel approach in whole genome mining and transcriptome analysis reveal conserved RiPPs in Trichoderma spp
Cited by: 14
Author(s): Gabriel A. Vignolle, Robert L. Mach, Astrid R. Mach-Aigner, Christian Derntl
Software Mentions: 8
Published: over 6 years ago

10.1371/journal.pone.0183264

The transcriptional profiling of human in vivo-generated plasma cells identifies selective imbalances in monoclonal gammopathies
Cited by: 12
Author(s): Luis M. Valor, Beatriz Rodrı́guez-Bayona, Ana Ramos-Amaya, José A. Brieva, Antonio Campos‐Caro
Software Mentions: 8
Published: about 9 years ago

10.1002/acn3.51441

Gut microbiome is associated with multiple sclerosis activity in children
Cited by: 18
Author(s): Mary Horton, Kathryn McCauley, Douglas Fadrosh, Kei E. Fujimura, Jennifer Graves, Jayne Ness, Yolanda Wheeler, Mark Gorman, Leslie Benson, Bianca Weinstock‐Guttman, Amy Waldman, Moses Rodriguez, Jan‐Mendelt Tillema, Lauren Krupp, Anita Belman, Soe Mar, Mary Rensel, Tanuja Chitnis, T. Charles Casper, John Rose, Janace Hart, Xiaorong Shao, Helen Tremlett, Susan V. Lynch, Lisa F. Barcellos, Emmanuelle Waubant
Software Mentions: 8
Published: about 5 years ago

10.3389/fpls.2021.616975

Heterotic Patterns of Temperate and Tropical Maize by Ear Photometry
Cited by: 1
Author(s): Seth Tolley, Amritpal Singh, Mitchell R. Tuinstra
Software Mentions: 8
Published: about 5 years ago

10.1186/1471-2105-14-133

How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis
Cited by: 23
Author(s): Robert Lehmann, Rainer Machné, Jens Georg, Manuela Benary, Ilka M. Axmann, Ralf Steuer
Software Mentions: 8
Published: over 13 years ago

10.1371/journal.pone.0234537

Prairie plants harbor distinct and beneficial root-endophytic bacterial communities
Cited by: 0
Author(s): Boahemaa Adu-Oppong, Scott A. Mangan, Cláudia Stein, Christopher P. Catano, Jonathan A. Myers, Gautam Dantas
Software Mentions: 8
Published: about 6 years ago

10.3389/fgene.2018.00123

Inferring Variation in Copy Number Using High Throughput Sequencing Data in R
Cited by: 15
Author(s): Brian J. Knaus, Niklaus J. Grünwald
Software Mentions: 8
Published: over 8 years ago

10.3390/foods8100488

Effect of Product Involvement on Panels’ Vocabulary Generation, Attribute Identification, and Sample Configurations in Beer
Cited by: 4
Author(s): Line Elgaard, Line Holler Mielby, Hildegarde Heymann, Derek V. Byrne
Software Mentions: 8
Published: almost 7 years ago

10.1371/journal.pone.0206077

Demographic characteristics of an avian predator, Louisiana Waterthrush (Parkesia motacilla), in response to its aquatic prey in a Central Appalachian USA watershed impacted by shale gas development
Cited by: 6
Author(s): Mack W. Frantz, Petra Bohall Wood, George T. Merovich
Software Mentions: 8
Published: almost 8 years ago

10.12688/f1000research.14361.1

freesurfer: Connecting the Freesurfer software with R
Cited by: 7
Author(s): John Muschelli, Elizabeth Sweeney, Ciprian M. Crainiceanu
Software Mentions: 8
Published: over 8 years ago

10.1128/mSphere.00488-17

Novel ITS1 Fungal Primers for Characterization of the Mycobiome
Cited by: 68
Author(s): Mykhaylo Usyk, Christine P. Zolnik, Hitesh D. Patel, Michael H. Levi, Robert D. Burk
Software Mentions: 8
Published: over 8 years ago

10.3390/e23010072

Unraveling of a Strongly Correlated Dynamical Network of Residues Controlling the Permeation of Potassium in KcsA Ion Channel
Cited by: 2
Author(s): Salvatore M. Cosseddu, Eunju Julia Choe, I. A. Khovanov
Software Mentions: 8
Published: over 5 years ago

10.1007/s00787-020-01535-2

Visual search in ADHD, ASD and ASD + ADHD: overlapping or dissociating disorders?
Cited by: 13
Author(s): Divya Seernani, K. Damania, Chara Ioannou, N. Penkalla, Holger Hill, Tom Foulsham, Alan Kingstone, Nicola Anderson, Giuseppe Boccignone, Stephan Bender, N. Smyrnis, Monica Biscaldi, Ulrich W. Ebner‐Priemer, Christoph Klein
Software Mentions: 8
Published: over 6 years ago

10.1038/s41598-021-99046-w

Using fecal immunochemical tubes for the analysis of the gut microbiome has the potential to improve colorectal cancer screening
Cited by: 7
Author(s): Kertu Liis Krigul, Oliver Aasmets, Kreete Lüll, Tõnis Org, Elin Org
Software Mentions: 8
Published: almost 5 years ago

10.1002/ece3.6167

Does breeding season variation affect evolution of a sexual signaling trait in a tropical lizard clade?
Cited by: 4
Author(s): Levi N. Gray, Anthony J. Barley, David M. Hillis, Carlos J. Pavón‐Vázquez, Steven Poe, Brittney A White
Software Mentions: 7
Published: over 6 years ago

10.1186/1471-2164-14-445

The Saccharomyces cerevisiae transcriptome as a mirror of phytochemical variation in complex extracts of Equisetum arvense from America, China, Europe and India
Cited by: 20
Author(s): R. Kimberley Cook, James R. Hennell, Samiuela Lee, Cheang Khoo, Maria Carles, Vincent J. Higgins, Suresh Govindaraghavan, Nikolaus J. Sucher
Software Mentions: 7
Published: about 13 years ago

10.1186/s12864-019-6047-9

Genome-wide effects of social status on DNA methylation in the brain of a cichlid fish, Astatotilapia burtoni
Cited by: 9
Author(s): Austin T. Hilliard, Dan Xie, Zhihai Ma, M Snyder, Russell D. Fernald
Software Mentions: 7
Published: almost 7 years ago

10.1186/s12864-021-07735-7

Non-coding RNAs in the interaction between rice and Meloidogyne graminicola
Cited by: 11
Author(s): Bruno Verstraeten, Mohammad Reza Atighi, Virginia Ruiz‐Ferrer, Carolina Escobar, Tim De Meyer, Tina Kyndt
Software Mentions: 7
Published: about 5 years ago

10.1186/s13148-018-0510-3

Multifactorial analysis of the stochastic epigenetic variability in cord blood confirmed an impact of common behavioral and environmental factors but not of in vitro conception
Cited by: 25
Author(s): Davide Gentilini, Edgardo Somigliana, Luca Pagliardini, Elisa Rabellotti, Paolo Garagnani, Luisa Bernardinelli, Enrico Papaleo, Massimo Candiani, Anna Maria Di Blasio, Paola Viganò
Software Mentions: 7
Published: about 8 years ago

10.1038/s41598-019-43860-w

Individual differences in working memory capacity and cue-guided behavior in humans
Cited by: 25
Author(s): Sara Garofalo, Simone Battaglia, Giuseppe di Pellegrino
Software Mentions: 7
Published: over 7 years ago

10.1002/ece3.3261

Evolutionarily significant units of the critically endangered leaf frogPithecopus ayeaye(Anura, Phyllomedusidae) are not effectively preserved by the Brazilian protected areas network
Cited by: 16
Author(s): Rafael Félix de Magalhães, Priscila Lemes, Arley Camargo, Ubirajara Oliveira, Reuber Albuquerque Brandão, Hans Thomassen, Paulo Christiano de Anchieta Garcia, Felipe Sá Fortes Leite, Fabrício R. Santos
Software Mentions: 7
Published: almost 9 years ago

10.1186/s12864-018-4689-7

Gene copy number variation in natural populations of Plasmodium falciparum in Eastern Africa
Cited by: 12
Author(s): Joan Simam, Martin K. Rono, Joyce M. Ngoi, Mary Nyonda, Sachel Mok, Kevin Marsh, Zbynek Bozdech, Margaret J. Mackinnon
Software Mentions: 7
Published: over 8 years ago

10.1038/s41598-019-39669-2

Parallel colonization of subalpine habitats in the central European mountains by Primula elatior
Cited by: 13
Author(s): Veronika Konečná, Michael Nowak, Filip Kolář
Software Mentions: 7
Published: over 7 years ago

10.1371/journal.pone.0179956

Author contributions to ecological publications: What does it mean to be an author in modern ecological research?
Cited by: 17
Author(s): John M. Logan, Sarah B. Bean, Alan A. Myers
Software Mentions: 7
Published: about 9 years ago

10.1038/s41598-018-21197-0

Effects of timber harvesting on the genetic potential for carbon and nitrogen cycling in five North American forest ecozones
Cited by: 14
Author(s): Erick Cardenas, Luis H. Orellana, Konstantinos T. Konstantinidis, William W. Mohn
Software Mentions: 7
Published: over 8 years ago

10.1371/journal.pcbi.1004765

A Multi-Method Approach for Proteomic Network Inference in 11 Human Cancers
Cited by: 29
Author(s): Yasin Şenbabaoğlu, S. Onur Sumer, Francisco Sánchez-Vega, Debra L. Bemis, Giovanni Ciriello, Nikolaus Schultz, Chris Sander
Software Mentions: 7
Published: over 10 years ago

10.1186/s13148-019-0651-z

Exploring targets of TET2-mediated methylation reprogramming as potential discriminators of prostate cancer progression
Cited by: 18
Author(s): Shivani Kamdar, Ruth Isserlin, Theodorus van der Kwast, Alexandre R. Zlotta, Gary D. Bader, Neil Fleshner, Bharati Bapat
Software Mentions: 7
Published: over 7 years ago

10.1016/j.celrep.2019.12.057

Cohesin Disrupts Polycomb-Dependent Chromosome Interactions in Embryonic Stem Cells
Cited by: 118
Author(s): James Rhodes, Angelika Feldmann, Benjamín Hernández-Rodríguez, Noèlia Díaz, Jill M. Brown, Nadezda A. Fursova, Neil P. Blackledge, Praveen Prathapan, Paula Dobrinić, Miles K. Huseyin, Aleksander Szczurek, Kai Kruse, K Nasmyth, Veronica J. Buckle, Juan M. Vaquerizas, Robert J. Klose
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-017-13252-z

Effects of vessel traffic and underwater noise on the movement, behaviour and vocalisations of bottlenose dolphins in an urbanised estuary
Cited by: 52
Author(s): Sarah A. Marley, Chandra Salgado Kent, Christine Erbe, Iain Parnum
Software Mentions: 7
Published: almost 9 years ago

10.1186/1471-2105-15-132

Investigating perturbed pathway modules from gene expression data via structural equation models
Cited by: 19
Author(s): Daniele Pepe, Mario Grassi
Software Mentions: 7
Published: over 12 years ago

10.3390/molecules25153402

The Mineral Profile of Polish Beers by Fast Sequential Multielement HR CS FAAS Analysis and Its Correlation with Total Phenolic Content and Antioxidant Activity by Chemometric Methods
Cited by: 8
Author(s): Elżbieta Zambrzycka-Szelewa, Edyta Nalewajko-Sieliwoniuk, Mariusz Zaremba, Andrzej Bajguz, Beata Godlewska‐Żyłkiewicz
Software Mentions: 7
Published: about 6 years ago

10.1038/s41420-021-00451-x

A novel defined pyroptosis-related gene signature for predicting the prognosis of ovarian cancer
Cited by: 256
Author(s): Ying Yang, Qinjin Dai, Hongbo Qi
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-017-13397-x

The effect of insecticide synergist treatment on genome-wide gene expression in a polyphagous pest
Cited by: 28
Author(s): Simon Snoeck, Robert Greenhalgh, Luc Tirry, Richard M. Clark, Thomas Van Leeuwen, Wannes Dermauw
Software Mentions: 7
Published: almost 9 years ago

10.1111/mec.15160

Impacts of long‐term elevated atmospheric CO2 concentrations on communities of arbuscular mycorrhizal fungi
Cited by: 19
Author(s): Irena Maček, Dave R. Clark, Nataša Šibanc, Gerald M. Moser, Dominik Vodnik, Christoph Müller, Alex J. Dumbrell
Software Mentions: 7
Published: about 7 years ago

10.3390/plants8070224

Phenotypic and Genetic Variation of an Interspecific Centaurium Hybrid (Gentianaceae) and Its Parental Species
Cited by: 4
Author(s): Tijana Banjanac, Sanja Đurović, Mihailo Jelić, Milan Dragićević, Danijela Mišić, Marijana Škorić, Jelena Živković, Branislav Šiler
Software Mentions: 7
Published: about 7 years ago

10.1186/s12862-019-1533-x

Hooked on you: shape of attachment structures in cymothoid isopods reflects parasitic strategy
Cited by: 14
Author(s): Charles Baillie, Rachel L. Welicky, Kerry A. Hadfield, Stefano Mariani, Robin M. D. Beck
Software Mentions: 7
Published: almost 7 years ago

10.3390/plants10050998

Sources of Resistance to Common Bacterial Blight and Charcoal Rot Disease for the Production of Mesoamerican Common Beans in the Southern United States
Cited by: 5
Author(s): Daniel Ambachew, Jacqueline Joshua, Margaret T. Mmbaga, Matthew W. Blair
Software Mentions: 7
Published: over 5 years ago

10.1093/molbev/msaa122

The Architecture of Metabolism Maximizes Biosynthetic Diversity in the Largest Class of Fungi
Cited by: 29
Author(s): Emile Gluck‐Thaler, Sajeet Haridas, Manfred Binder, Igor V. Grigoriev, Pedro W. Crous, Joseph W. Spatafora, Kathryn E. Bushley, Jason C. Slot
Software Mentions: 7
Published: over 6 years ago

10.1038/srep22164

Bacterial diversity in saliva and oral health-related conditions: the Hisayama Study
Cited by: 201
Author(s): Toru Takeshita, Shinya Kageyama, Michiko Furuta, Hideyuki Tsuboi, Kenji Takeuchi, Yukie Shibata, Yoshihiro Shimazaki, Sumio Akifusa, Toshiharu Ninomiya, Yutaka Kiyohara, Yoshihisa Yamashita
Software Mentions: 7
Published: over 10 years ago

10.1038/s41598-021-96967-4

Parasites and diet as main drivers of the Malagasy gut microbiome richness and function
Cited by: 3
Author(s): Stanislas Mondot, Philippe Poirier, Ahmed Abou-Bacar, Valentin Greigert, Julie Brunet, Céline Nourrisson, Milijaona Randrianarivelojosia, Jean-Louis Razafindrakoto, Eugène Morel, Rivo Rakotomalala, Marion Leclerc, Karine Le Roux, Céline Monot, Patricia Lepage, Ermanno Candolfi
Software Mentions: 7
Published: about 5 years ago

10.1038/srep29532

Delineation of autoantibody repertoire through differential proteogenomics in hepatitis C virus-induced cryoglobulinemia
Cited by: 12
Author(s): Masato Ogishi, Hiroshi Yotsuyanagi, Kyoji Moriya, Kazuhiko Koike
Software Mentions: 7
Published: about 10 years ago

10.1098/rsos.210172

Assessing urinary odours across the oestrous cycle in a mouse model using portable and benchtop gas chromatography-mass spectrometry
Cited by: 4
Author(s): Jia Tang, Alice C. Poirier, Gwen Duytschaever, Laís Alves Antonio Moreira, Omer Nevo, Amanda D. Melin
Software Mentions: 7
Published: about 5 years ago

10.1186/s13040-018-0166-8

Gene set analysis methods: a systematic comparison
Cited by: 57
Author(s): Ravi Mathur, Daniel M. Rotroff, Ma Jun, Ali Shojaie, Alison A. Motsinger‐Reif
Software Mentions: 7
Published: over 8 years ago

10.3390/medicina55060269

A Robust Approach for Identification of Cancer Biomarkers and Candidate Drugs
Cited by: 10
Author(s): Shahjaman, Rezanur Rahman, S. M. Shahinul Islam, Md. Nurul Haque Mollah
Software Mentions: 7
Published: about 7 years ago

10.1128/AEM.01715-20

Risk Factors Associated with Carbapenemase-Producing Enterobacterales (CPE) Positivity in the Hospital Wastewater Environment
Cited by: 9
Author(s): Stacy C. Park, Hardik I. Parikh, Kasi Vegesana, Nicole Stoesser, Katie E. Barry, Shireen Meher Kotay, Sarah Dudley, Timothy E. A. Peto, Derrick W. Crook, A. Sarah Walker, Amy J Mathers
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0253779

Altered states phenomena induced by visual flicker light stimulation
Cited by: 7
Author(s): Marie Therese Bartossek, Johanna Kemmerer, Timo Torsten Schmidt
Software Mentions: 7
Published: about 5 years ago

10.1186/s13059-020-01992-7

TADsplimer reveals splits and mergers of topologically associating domains for epigenetic regulation of transcription
Cited by: 5
Author(s): Guangyu Wang, Qingshu Meng, Bo Xia, Shuo Zhang, Jie Lv, Dongyu Zhao, Yanqiang Li, Xin Wang, Lili Zhang, John P. Cooke, Qi Cao, Kaifu Chen
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pone.0167265

Evidence of Facilitation Cascade Processes as Drivers of Successional Patterns of Ecosystem Engineers at the Upper Altitudinal Limit of the Dry Puna
Cited by: 13
Author(s): Luca Malatesta, Federico Maria Tardella, Karina Piermarteri, Andrea Catorci
Software Mentions: 7
Published: almost 10 years ago

10.1007/s00425-021-03664-7

Sex dimorphism in dioecious Palmer amaranth (Amaranthus palmeri) in response to water stress
Cited by: 12
Author(s): Mohsen B. Mesgaran, Maor Matzrafi, Sara Ohadi
Software Mentions: 7
Published: about 5 years ago

10.3390/microorganisms8101592

Gut Microbiome in Children from Indigenous and Urban Communities in México: Different Subsistence Models, Different Microbiomes
Cited by: 12
Author(s): Andrés Sánchez-Quinto, Daniel Cerqueda‐García, Luisa I. Falcón, Osiris Gaona, Santiago Martínez-Correa, Javier Nieto, Isaac González‐Santoyo
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0076051

Alterations in miRNA Levels in the Dentate Gyrus in Epileptic Rats
Cited by: 79
Author(s): Anna Bot, Konrad J. Dębski, Katarzyna Łukasiuk
Software Mentions: 7
Published: almost 13 years ago

10.1534/g3.117.300479

Multivariate Analysis of the Cotton Seed Ionome Reveals a Shared Genetic Architecture
Cited by: 13
Author(s): Duke Pauli, Gregory R. Ziegler, Min Ren, Matthew A. Jenks, Douglas J. Hunsaker, Min Zhang, Ivan Baxter, Michael A. Gore
Software Mentions: 7
Published: over 8 years ago

10.3390/brainsci11020231

Infant Eye Gaze While Viewing Dynamic Faces
Cited by: 5
Author(s): Lisa M. Oakes, Michaela C. DeBolt, Aaron G. Beckner, Annika T. Voss, Lisa Cantrell
Software Mentions: 7
Published: over 5 years ago

10.3390/ani10020242

Applicability of an Unmedicated Feeding Program Aimed to Reduce the Use of Antimicrobials in Nursery Piglets: Impact on Performance and Fecal Microbiota
Cited by: 2
Author(s): Paola López-Colom, Jordi Estellé, Jordi Bonet, Julià Coma, S. M. Martín‐Orúe
Software Mentions: 7
Published: over 6 years ago

10.1186/s12983-019-0309-x

Mining morphometrics and age from past survey photographs
Cited by: 3
Author(s): Caitlin Black, Hannah S. Mumby, Michelle Henley
Software Mentions: 7
Published: over 7 years ago

10.3390/microorganisms8101528

Metabolic Response of Faecalibacterium prausnitzii to Cell-Free Supernatants from Lactic Acid Bacteria
Cited by: 14
Author(s): Mathilde Lebas, Peggy Garault, Daniel Carrillo, Francisco M. Codoñer, Muriel Derrien
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0229146

Vegetation changes in temperate ombrotrophic peatlands over a 35 year period
Cited by: 20
Author(s): Nicolas Pinceloup, Monique Poulin, Marie‐Hélène Brice, Stéphanie Pellerin
Software Mentions: 7
Published: over 6 years ago

10.1186/s12870-020-02808-3

Integrated Transcriptomic and Metabolomic analysis reveals a transcriptional regulation network for the biosynthesis of carotenoids and flavonoids in ‘Cara cara’ navel Orange
Cited by: 18
Author(s): Haipeng Zhang, Jiajing Chen, Zhaoxin Peng, Meiyan Shi, Xiao Liu, Wen Huang, Youwu Jiang, Yunjiang Cheng, Juan Xu, Hongyan Zhang
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0104705

Laurentian Great Lakes Phytoplankton and Their Water Quality Characteristics, Including a Diatom-Based Model for Paleoreconstruction of Phosphorus
Cited by: 37
Author(s): Euan D. Reavie, Adam J. Heathcote, Victoria L. Shaw Chraïbi
Software Mentions: 7
Published: about 12 years ago

10.1186/s12870-016-0754-z

Genetic diversity, linkage disequilibrium and power of a large grapevine (Vitis vinifera L) diversity panel newly designed for association studies
Cited by: 72
Author(s): Stéphane Nicolas, Jean‐Pierre Péros, Thierry Lacombe, Amandine Launay, Marie‐Christine Le Paslier, Aurélie Berard, Brigitte Mangin, Sophie Valière, Frédéric Martins, Loïc Le Cunff, Valérie Laucou, Roberto Baciliéri, Alexis Dereeper, Philippe Chatelet, Patrice This, Agnès Doligez
Software Mentions: 7
Published: over 10 years ago

10.3389/fpsyg.2018.00353

Brazil-Portugal Transcultural Adaptation of the UWES-9: Internal Consistency, Dimensionality, and Measurement Invariance
Cited by: 21
Author(s): Jorge Sinval, Sônia Regina Pasian, Cristina Queirós, João Marôco
Software Mentions: 7
Published: over 8 years ago

10.3389/fnsys.2021.692152

Age-Related Variations in Regional White Matter Volumetry and Microstructure During the Post-adolescence Period: A Cross-Sectional Study of a Cohort of 1,713 University Students
Cited by: 4
Author(s): Ami Tsuchida, Alexandre Laurent, Fabrice Crivello, Laurent Petit, Antonietta Pepe, Naka Beguedou, Stéphanie Debette, Christophe Tzourio, Bernard Mazoyer
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0127653

Anatomical Network Analysis Shows Decoupling of Modular Lability and Complexity in the Evolution of the Primate Skull
Cited by: 32
Author(s): Borja Esteve‐Altava, Julia C. Boughner, Rui Diogo, Brian Villmoare, Diego Rasskin‐Gutman
Software Mentions: 7
Published: over 11 years ago

10.1186/s40168-017-0302-6

Influence of the pneumococcal conjugate vaccines on the temporal variation of pneumococcal carriage and the nasal microbiota in healthy infants: a longitudinal analysis of a case–control study
Cited by: 27
Author(s): Moana Mika, Josua Maurer, Insa Korten, Aurélie Allemann, Suzanne Aebi, Silvio D. Brugger, Weihong Qi, Urs Frey, Philipp Latzin, Markus Hilty
Software Mentions: 7
Published: about 9 years ago

10.18632/aging.203017

Identification of key transcriptome biomarkers based on a vital gene module associated with pathological changes in Alzheimer’s disease
Cited by: 11
Author(s): Tong Zhang, Yang Shen, Yiqing Guo, Junyan Yao
Software Mentions: 7
Published: over 5 years ago

10.3389/fpsyg.2021.630751

The Influence of Personality, Resilience, and Alexithymia on Mental Health During COVID-19 Pandemic
Cited by: 70
Author(s): Sofia Adelaide Osimo, Marilena Aiello, Claudio Gentili, Silvio Ionta, Cinzia Cecchetto
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0187742

Increased sediment load during a large-scale dam removal changes nearshore subtidal communities
Cited by: 26
Author(s): Stephen P. Rubin, Ian Miller, Melissa M. Foley, Helen Berry, Jeffrey J. Duda, Benjamin Hudson, Nancy Elder, Matthew M. Beirne, Jonathan A. Warrick, Michael L. McHenry, Andrew W. Stevens, Emily Eidam, A. S. Ogston, Guy Gelfenbaum, Rob Pedersen
Software Mentions: 7
Published: over 8 years ago

10.7717/peerj.8289

Substrate rugosity and temperature matters: patterns of benthic diversity at tropical intertidal reefs in the SW Atlantic
Cited by: 14
Author(s): Ana Carolina de Azevedo Mazzuco, Patricia Sarcinelli Stelzer, Ângelo F. Bernardino
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pone.0233235

Dominance rank but not body size influences female reproductive success in mountain gorillas
Cited by: 19
Author(s): Edward Wright, Jordi Galbany, Shannon C. McFarlin, Eric Ndayishimiye, Tara S. Stoinski, Martha M. Robbins
Software Mentions: 7
Published: over 6 years ago

10.3389/fpls.2021.627573

Do Invasive Earthworms Affect the Functional Traits of Native Plants?
Cited by: 4
Author(s): Lise Thouvenot, Olga Ferlian, Rémy Beugnon, Tom Künne, Alfred Lochner, Madhav P. Thakur, Manfred Türke, Nico Eisenhauer
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0158911

Wolves Recolonizing Islands: Genetic Consequences and Implications for Conservation and Management
Cited by: 8
Author(s): Liivi Plumer, Marju Keis, Jaanus Remm, Maris Hindrikson, I. Jõgisalu, Peep Männil, Marko Kübarsepp, Urmas Saarma
Software Mentions: 7
Published: about 10 years ago

10.1002/brb3.2043

Hungarian validation of the Buss–Perry Aggression Questionnaire—Is the short form more adequate?
Cited by: 6
Author(s): Szabolcs Zimonyi, Krisztián Kasos, Zsuzsa Halmai, Luca Csirmaz, Helga Stadler, Sándor Rózsa, Anna Székely, Eszter Kótyuk
Software Mentions: 7
Published: over 5 years ago

10.3389/fvets.2019.00499

Developing Diagnostic Frameworks in Veterinary Behavioral Medicine: Disambiguating Separation Related Problems in Dogs
Cited by: 25
Author(s): Luciana Santos de Assis, Raquel Matos, Thomas W. Pike, Ohp Burman, Daniel S. Mills
Software Mentions: 7
Published: over 6 years ago

10.1186/s12874-019-0681-4

Machine learning in medicine: a practical introduction
Cited by: 526
Author(s): Jenni A. M. Sidey-Gibbons, Chris Sidey‐Gibbons
Software Mentions: 7
Published: over 7 years ago

10.3389/fpls.2019.01481

Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress Environments
Cited by: 33
Author(s): Sumit Pradhan, Ali Babar, Kelly R. Robbins, Guihua Bai, Richard E. Mason, Jahangir Khan, Dipendra Shahi, Muhsin Avci, Jia Guo, Mohammad Maksud Hossain, Madhav Bhatta, Maryati Mohamed, Senthold Asseng, Paul St. Amand, Salvador A. Gezan, Byung‐Kee Baik, Ann R. Blount, Amy Bernardo
Software Mentions: 7
Published: almost 7 years ago

10.7554/eLife.62800

Mapping immune variation and var gene switching in naive hosts infected with Plasmodium falciparum
Cited by: 18
Author(s): Kathryn H. Milne, Alasdair Ivens, Adam J. Reid, Magda E. Lotkowska, Áine O’Toole, Geetha Sankaranarayanan, Diana Muñoz Sandoval, Wiebke Nahrendorf, Clément Regnault, Nick J. Edwards, Sarah E. Silk, Ruth Payne, Angela M. Minassian, Navin Venkatraman, Mandy Sanders, Adrian V. S. Hill, Michael P. Barrett, Matthew Berriman, Simon J. Draper, J. Alexandra Rowe, Philip J. Spence
Software Mentions: 7
Published: over 5 years ago

10.1155/2020/8850199

Forecasting COVID-19 Cases Using Alpha-Sutte Indicator: A Comparison with Autoregressive Integrated Moving Average (ARIMA) Method
Cited by: 5
Author(s): A. M. C. H. Attanayake, S. S. N. Perera
Software Mentions: 7
Published: over 5 years ago

10.3390/biom11060796

Lower Gene Expression of Angiotensin Converting Enzyme 2 Receptor in Lung Tissues of Smokers With COVID-19Pneumonia
Cited by: 2
Author(s): Francesca Lunardi, Francesco Fortarezza, Luca Vedovelli, Federica Pezzuto, Annalisa Boscolo, Marco Rossato, Roberto Vettor, Anna María Cattelan, Claudia Del Vecchio, Andrea Crisanti, Paolo Navalesi, Darío Gregori, Fiorella Calabrese
Software Mentions: 7
Published: over 5 years ago

10.7717/peerj.9391

Shannon diversity index: a call to replace the original Shannon’s formula with unbiased estimator in the population genetics studies
Cited by: 61
Author(s): Maciej K. Konopiński
Software Mentions: 7
Published: about 6 years ago

10.7554/eLife.29312

Single-cell transcriptomics reveals a new dynamical function of transcription factors during embryonic hematopoiesis
Cited by: 35
Author(s): Isabelle Bergiers, Tallulah Andrews, Özge Vargel Bölükbaşı, Andreas Buneß, Ewa Janosz, Natalia López-Anguita, Kerstin Ganter, Kinga Kosim, Cemre Celen, Gülce Itır Perçin, Paul Collier, Bianka Baying, Vladimı́r Beneš, Martin Hemberg, Christophe Lancrin
Software Mentions: 7
Published: over 8 years ago

10.7554/eLife.41815

Immune genes are hotspots of shared positive selection across birds and mammals
Cited by: 109
Author(s): Allison J. Shultz, Timothy B. Sackton
Software Mentions: 7
Published: over 7 years ago

10.3390/jof7080646

Incidence, Spatial Pattern and Temporal Progress of Fusarium Wilt of Bananas
Cited by: 5
Author(s): Daniel Winter Heck, Miguel Dita, Emerson M. Del Ponte, Eduardo S. G. Mizubuti
Software Mentions: 7
Published: about 5 years ago

10.7189/jogh.11.04047

Topical emollient therapy with sunflower seed oil alters the skin microbiota of young children with severe acute malnutrition in Bangladesh: A randomised, controlled study
Cited by: 3
Author(s): Natalie Fischer, Gary L. Darmstadt, K. M. Shahunja, Jonathan Crowther, Lindsay Kendall, Rachel A. Gibson, Tahmeed Ahmed, David A. Relman
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0224079

Typological analysis of public-private partnerships in the veterinary domain
Cited by: 11
Author(s): Margot Galiere, Marisa Peyre, Facundo Muñoz, Mariline Poupaud, A. Dehove, François Roger, Isabelle Dieuzy-Labaye
Software Mentions: 7
Published: almost 7 years ago

10.1186/s12859-015-0830-7

DHOEM: a statistical simulation software for simulating new markers in real SNP marker data
Cited by: 0
Author(s): Laval Jacquin, Tuong-Vi Cao, Cécile Grenier, Nourollah Ahmadi
Software Mentions: 7
Published: almost 11 years ago

10.1186/s12859-020-03945-0

mixIndependR: a R package for statistical independence testing of loci in database of multi-locus genotypes
Cited by: 1
Author(s): Bing Song, August E. Woerner, John V. Planz
Software Mentions: 7
Published: over 5 years ago

10.7717/peerj.11733

Identification of a circadian gene signature that predicts overall survival in lung adenocarcinoma
Cited by: 2
Author(s): Xinliang Gao, Mingbo Tang, Suyan Tian, Jialin Li, Wei Liu
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0210783

Development of a behavioural welfare assessment tool for routine use with captive elephants
Cited by: 39
Author(s): Lisa Yon, Ellen Williams, Naomi D. Harvey, Lucy Asher
Software Mentions: 7
Published: over 7 years ago

10.3389/fneur.2019.01117

Normative Data and Minimally Detectable Change for Inner Retinal Layer Thicknesses Using a Semi-automated OCT Image Segmentation Pipeline
Cited by: 33
Author(s): Seyedamirhosein Motamedi, K. Gawlik, Noah Ayadi, Hanna Zimmermann, Susanna Asseyer, Charlotte Bereuter, Janine Mikolajczak, Friedemann Paul, Ella-Maria Kadas, Alexander U. Brandt
Software Mentions: 7
Published: almost 7 years ago

10.1186/s12864-019-6162-7

Transcriptome analysis of the differential effect of the NADPH oxidase gene RbohB in Phaseolus vulgaris roots following Rhizobium tropici and Rhizophagus irregularis inoculation
Cited by: 11
Author(s): Citlali Fonseca-García, Alejandra E. Zayas, Jesús Montiel, Noreide Nava, Federico Sánchez, Carmen Quinto
Software Mentions: 7
Published: almost 7 years ago

10.1371/journal.pone.0147249

Cell and Microvesicle Urine microRNA Deep Sequencing Profiles from Healthy Individuals: Observations with Potential Impact on Biomarker Studies
Cited by: 43
Author(s): Iddo Z. Ben‐Dov, Veronica M. Whalen, Béatrice Goilav, Klaas E.A. Max, Thomas Tuschl
Software Mentions: 7
Published: over 10 years ago

10.1371/journal.pone.0238405

Persistent El Niño driven shifts in marine cyanobacteria populations
Cited by: 7
Author(s): Alyse A. Larkin, Allison R. Moreno, Adam Fagan, Alyssa Fowlds, Alani Ruiz, Adam C. Martiny
Software Mentions: 7
Published: almost 6 years ago

10.3389/fgene.2021.702695

Identification and Elucidation of the Protective isomiRs in Lung Cancer Patient Prognosis
Cited by: 1
Author(s): Fu-Mei Hsieh, Su-Ting Lai, Ming-Fong Wu, Chen-Ching Lin
Software Mentions: 7
Published: almost 5 years ago

10.1128/mSphere.00806-20

Raman Spectroscopy-Based Measurements of Single-Cell Phenotypic Diversity in Microbial Populations
Cited by: 15
Author(s): Cristina García‐Timermans, Ruben Props, Boris Zacchetti, Myrsini Sakarika, Frank Delvigne, Nico Boon
Software Mentions: 7
Published: almost 6 years ago

10.3389/fcell.2021.622198

Succinylation Regulators Promote Clear Cell Renal Cell Carcinoma by Immune Regulation and RNA N6-Methyladenosine Methylation
Cited by: 11
Author(s): Wenqing Lü, Xiaofang Che, Xiujuan Qu, Chunlei Zheng, Xianghong Yang, Bowen Bao, Zhi Li, Duo Wang, Yue Jin, Yizhe Wang, Jiawen Xiao, Jianfei Qi, Yunpeng Liu
Software Mentions: 7
Published: over 5 years ago

10.3390/v13040550

Spatial Analysis of the 2017 Outbreak of Hemorrhagic Disease and Physiographic Region in the Eastern United States
Cited by: 7
Author(s): Christine L Casey, Stephen L. Rathbun, David E. Stallknecht, Mark G. Ruder
Software Mentions: 7
Published: over 5 years ago

10.18632/aging.101356

A hypothesis-driven approach identifies CDK4 and CDK6 inhibitors as candidate drugs for treatments of adrenocortical carcinomas
Cited by: 22
Author(s): Djihad Hadjadj, Su-Jung Kim, Thomas Denecker, Laura Ben Driss, Jean‐Charles Cadoret, Chrystelle Maric, Giuseppe Baldacci, Fabien Fauchereau
Software Mentions: 7
Published: over 8 years ago

10.12688/f1000research.17145.2

False positives in trans-eQTL and co-expression analyses arising from RNA-sequencing alignment errors
Cited by: 35
Author(s): Ashis Saha, Alexis Battle
Software Mentions: 7
Published: over 7 years ago

Projects: pypi: stats

Science Score: 90/100

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Papers Mentioning stats 3,105