Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/1471-2105-15-132

https://doi.org/10.1186/1471-2105-15-132

Investigating perturbed pathway modules from gene expression data via structural equation models

Cited by: 19
Author(s): Daniele Pepe, Mario Grassi
Published: over 10 years ago

Software Mentions 7

bioconductor: graphite
GRAPH Interaction from pathway Topological Environment
Papers that mentioned: 30
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
Papers that mentioned: 155
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
cran: samr
SAM: Significance Analysis of Microarrays
Papers that mentioned: 114
pypi: graphite
Papers that mentioned: 30
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
pypi: stats
Calculator-style statistical functions
Papers that mentioned: 3,105