Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: som

https://packages.ecosyste.ms/registries/pypi.org/packages/som

stanford open modules for python
21 versions
Latest release: over 7 years ago
60 downloads last month

Papers Mentioning som 9

wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool
Cited by: 36
Author(s): Deisy Morselli Gysi, André Voigt, Tiago de Miranda Fragoso, Eivind Almaas, Katja Nowick
Software Mentions: 17
Published: about 6 years ago

10.3390/life11070716

Single-Cell Transcriptome Profiling Simulation Reveals the Impact of Sequencing Parameters and Algorithms on Clustering
Cited by: 0
Author(s): Yunhe Liu, Aoshen Wu, Xueqing Peng, Xiaona Liu, Gang Liu, Lei Liu
Software Mentions: 15
Published: over 3 years ago

10.3390/cancers11081057

Mining of Self-Organizing Map Gene-Expression Portraits Reveals Prognostic Stratification of HPV-Positive Head and Neck Squamous Cell Carcinoma
Cited by: 21
Author(s): Laura D. Locati, Mara Serena Serafini, Maria Federica Iannò, Andrea Carenzo, Ester Orlandi, Carlo Resteghin, Stefano Cavalieri, Paolo Bossi, Silvana Canevari, Lisa Licitra, Loris De Cecco
Software Mentions: 9
Published: over 5 years ago

10.1186/1471-2105-14-133

How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis
Cited by: 23
Author(s): Robert Lehmann, Rainer Machné, Jens Georg, Manuela Benary, Ilka M. Axmann, Ralf Steuer
Software Mentions: 8
Published: over 11 years ago

10.1186/1471-2105-11-279

Importance of replication in analyzing time-series gene expression data: Corticosteroid dynamics and circadian patterns in rat liver
Cited by: 12
Author(s): Tung Nguyen, Richard R. Almon, Debra C. DuBois, William J. Jusko, Ioannis P. Androulakis
Software Mentions: 6
Published: over 14 years ago

10.3390/metabo10060218

Age-Dependent Metabolic Profiles Unravel the Metabolic Relationships within and between Flax Leaves (Linum usitatissimum)
Cited by: 10
Author(s): Nicole Pontarin, Roland Molinié, David Mathiron, Job Tchoumtchoua, Solène Bassard, David Gagneul, Benjamin Thiombiano, Hervé Demailly, Jean-Xavier Fontaine, Xavier Guillot, Vivien Sarazin, Anthony Quéro, François Mesnard
Software Mentions: 4
Published: over 4 years ago

10.3389/fgene.2016.00079

Cartography of Pathway Signal Perturbations Identifies Distinct Molecular Pathomechanisms in Malignant and Chronic Lung Diseases
Cited by: 6
Author(s): Arsen Arakelyan, Lilit Nersisyan, Martin Petřek, Henry Löffler-Wirth, Hans Binder
Software Mentions: 3
Published: over 8 years ago

10.1038/s41598-018-33105-7

Oenological traits of Lachancea thermotolerans show signs of domestication and allopatric differentiation
Cited by: 70
Author(s): Ana Hranilović, Joanna M. Gambetta, Leigh Schmidtke, Paul K. Boss, Paul R. Grbin, Isabelle Masneuf‐Pomarède, Marina Bely, Warren Albertin, Vladimir Jiranek
Software Mentions: 3
Published: about 6 years ago