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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.3390/cancers11081057

https://doi.org/10.3390/cancers11081057

Mining of Self-Organizing Map Gene-Expression Portraits Reveals Prognostic Stratification of HPV-Positive Head and Neck Squamous Cell Carcinoma

Cited by: 21
Author(s): Laura D. Locati, Mara Serena Serafini, Maria Federica Iannò, Andrea Carenzo, Ester Orlandi, Carlo Resteghin, Stefano Cavalieri, Paolo Bossi, Silvana Canevari, Lisa Licitra, Loris De Cecco
Published: about 6 years ago

Software Mentions 9

bioconductor: GSVA
Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893
Very Likely Science (100)
bioconductor: oposSOM
Comprehensive analysis of transcriptome data
Papers that mentioned: 27
Very Likely Science (100)
bioconductor: ssize
Estimate Microarray Sample Size
Papers that mentioned: 5
Very Likely Science (100)
cran: fastICA
FastICA Algorithms to Perform ICA and Projection Pursuit
Papers that mentioned: 56
Very Likely Science (93)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
Very Likely Science (100)
cran: som
Self-Organizing Map
Papers that mentioned: 9
Very Likely Science (83)
pypi: GSVA
Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893
Very Likely Science (100)
pypi: som
stanford open modules for python
Papers that mentioned: 9
Very Likely Science (100)