Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-018-2351-7

https://doi.org/10.1186/s12859-018-2351-7

wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool

Cited by: 36
Author(s): Deisy Morselli Gysi, André Voigt, Tiago de Miranda Fragoso, Eivind Almaas, Katja Nowick
Published: about 6 years ago

Software Mentions 17

bioconductor: affy

Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: network

Classes for Relational Data
Papers that mentioned: 51

cran: plyr

Tools for Splitting, Applying and Combining Data
Papers that mentioned: 468

cran: som

Self-Organizing Map
Papers that mentioned: 9

cran: stringr

Simple, Consistent Wrappers for Common String Operations
Papers that mentioned: 172

cran: visNetwork

Network Visualization using 'vis.js' Library
Papers that mentioned: 49

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

cran: wTO

Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
Papers that mentioned: 7

pypi: data

Work with unicode/non-unicode data from files or strings uniformly.
Papers that mentioned: 33

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: mim

Man in the middle proxy server
Papers that mentioned: 4

pypi: network

A very simple networking library written by David Whale (@whaleygeek).
Papers that mentioned: 51

pypi: plyr

UNKNOWN
Papers that mentioned: 468

pypi: som

stanford open modules for python
Papers that mentioned: 9

pypi: stats

Calculator-style statistical functions
Papers that mentioned: 3,105

pypi: table

Two-dimensional tables backed by Numpy with named rows and columns.
Papers that mentioned: 48