Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: wTO

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/wTO

Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
15 versions
Latest release: over 1 year ago
4 dependent packages
515 downloads last month

Papers Mentioning wTO 7

wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool
Cited by: 36
Author(s): Deisy Morselli Gysi, André Voigt, Tiago de Miranda Fragoso, Eivind Almaas, Katja Nowick
Software Mentions: 17
Published: about 6 years ago

10.1186/s12859-021-04179-4

GWENA: gene co-expression networks analysis and extended modules characterization in a single Bioconductor package
Cited by: 12
Author(s): Gwenaëlle G. Lemoine, Marie‐Pier Scott‐Boyer, Bathilde Ambroise, Olivier Périn, Arnaud Droit
Software Mentions: 10
Published: over 3 years ago

10.1371/journal.pone.0240523

Whole transcriptomic network analysis using Co-expression Differential Network Analysis (CoDiNA)
Cited by: 12
Author(s): Deisy Morselli Gysi, Tiago de Miranda Fragoso, Fatemeh Zebardast, Wesley Bertoli, Volker Busskamp, Eivind Almaas, Katja Nowick
Software Mentions: 8
Published: about 4 years ago

10.1098/rsif.2019.0610

Construction, comparison and evolution of networks in life sciences and other disciplines
Cited by: 10
Author(s): Deisy Morselli Gysi, Katja Nowick
Software Mentions: 4
Published: over 4 years ago

10.1186/s12859-019-2596-9

Assessment of weighted topological overlap (wTO) to improve fidelity of gene co-expression networks
Cited by: 8
Author(s): André Voigt, Eivind Almaas
Software Mentions: 4
Published: almost 6 years ago

10.1016/j.cels.2018.08.011

Combined Experimental and System-Level Analyses Reveal the Complex Regulatory Network of miR-124 during Human Neurogenesis
Cited by: 38
Author(s): Lisa K. Kutsche, Deisy Morselli Gysi, Jörg Fallmann, Kerstin Lenk, Rebecca Petri, Anka Swiersy, Simon D. Klapper, Karolina Pircs, Shahryar Khattak, Peter F. Stadler, Johan Jakobsson, Katja Nowick, Volker Busskamp
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0187611

Comparative analysis of weighted gene co-expression networks in human and mouse
Cited by: 10
Author(s): Marius Eidsaa, Lisa Stubbs, Eivind Almaas
Software Mentions: 2
Published: about 7 years ago