Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12859-021-04179-4

https://doi.org/10.1186/s12859-021-04179-4

Cited by: 12
Author(s): Gwenaëlle G. Lemoine, Marie‐Pier Scott‐Boyer, Bathilde Ambroise, Olivier Périn, Arnaud Droit
Published: almost 3 years ago

Software Mentions 10

bioconductor: CEMiTool

Co-expression Modules identification Tool
Papers that mentioned: 31

bioconductor: GWENA

Pipeline for augmented co-expression analysis
Papers that mentioned: 1

bioconductor: SummarizedExperiment

SummarizedExperiment container
Papers that mentioned: 52

cran: CoDiNA

Co-Expression Differential Network Analysis
Papers that mentioned: 7

cran: gprofiler2

Interface to the 'g:Profiler' Toolset
Papers that mentioned: 21

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: NetRep

Permutation Testing Network Module Preservation Across Datasets
Papers that mentioned: 8

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

cran: wTO

Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
Papers that mentioned: 7

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555