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Papers: 10.1186/s12859-021-04179-4

https://doi.org/10.1186/s12859-021-04179-4

GWENA: gene co-expression networks analysis and extended modules characterization in a single Bioconductor package

Cited by: 12
Author(s): Gwenaëlle G. Lemoine, Marie‐Pier Scott‐Boyer, Bathilde Ambroise, Olivier Périn, Arnaud Droit
Published: about 4 years ago

Software Mentions 10

bioconductor: CEMiTool
Co-expression Modules identification Tool
Papers that mentioned: 31
Very Likely Science (100)
bioconductor: GWENA
Pipeline for augmented co-expression analysis
Papers that mentioned: 1
Very Likely Science (100)
bioconductor: SummarizedExperiment
SummarizedExperiment container
Papers that mentioned: 52
Very Likely Science (100)
cran: CoDiNA
Co-Expression Differential Network Analysis
Papers that mentioned: 7
Very Likely Science (85)
cran: gprofiler2
Interface to the 'g:Profiler' Toolset
Papers that mentioned: 21
Very Likely Science (75)
cran: igraph
Network Analysis and Visualization
Papers that mentioned: 1,555
Very Likely Science (100)
cran: NetRep
Permutation Testing Network Module Preservation Across Datasets
Papers that mentioned: 8
Very Likely Science (80)
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
Very Likely Science (85)
cran: wTO
Computing Weighted Topological Overlaps (wTO) & Consensus wTO Network
Papers that mentioned: 7
Very Likely Science (85)
pypi: igraph
High performance graph data structures and algorithms
Papers that mentioned: 1,555
Very Likely Science (100)