Projects: cran: NetRep
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/NetRep
Permutation Testing Network Module Preservation Across Datasets
6 versions
Latest release: almost 2 years ago
403 downloads last month
Enhanced Analysis
Repository Activity:
Repository Owner:
Scott Ritchie (user)
README Analysis:
DOI Found
Science Score: 80/100
Starting Score: 100 points
Bonuses:
-
+4
Science terms in README
2 scientific terms found in README -
+20
DOI references
2 DOI references found in README
Penalties:
-
-15
No science keywords
No scientific terms found in keywords/classifiers -
-25
Non-science indicators
1 non-scientific terms found
Very Likely Science (80)
Papers Mentioning NetRep 8
10.1186/s12859-021-04179-4
GWENA: gene co-expression networks analysis and extended modules characterization in a single Bioconductor packageCited by: 12
Author(s): Gwenaëlle G. Lemoine, Marie‐Pier Scott‐Boyer, Bathilde Ambroise, Olivier Périn, Arnaud Droit
Software Mentions: 10
Published: about 4 years ago
10.7717/peerj.4327
Evidence for widespread dysregulation of circadian clock progression in human cancerCited by: 66
Author(s): Jarrod Shilts, Guanhua Chen, Jacob J. Hughey
Software Mentions: 5
Published: over 7 years ago
10.1038/s41598-019-56656-9
Identification of a key gene module associated with glucocorticoid- induced derangement in bone mineral density in patients with asthmaCited by: 5
Author(s): Suh Young Lee, Ha Kyeong Won, Byung-Keun Kim, Sae Hoon Kim, Yoon Seok Chang, Sang Heon Cho, H. William Kelly, Kelan G. Tantisira, Heung-Woo Park
Software Mentions: 3
Published: over 5 years ago
10.1093/molbev/msaa002
Disrupted Gene Networks in Subfertile Hybrid House MiceCited by: 20
Author(s): Katy Morgan, Bettina Harr, Michael A. White, Bret A. Payseur, Leslie M. Turner
Software Mentions: 3
Published: over 5 years ago
10.18632/aging.102943
Genetic networks in Parkinson’s and Alzheimer’s diseaseCited by: 23
Author(s): Jack Kelly, Rana Moyeed, Camille Carroll, Shouqing Luo, Xinzhong Li
Software Mentions: 3
Published: over 5 years ago
10.1186/s13059-017-1279-y
An interaction map of circulating metabolites, immune gene networks, and their genetic regulationCited by: 38
Author(s): Artika P. Nath, Scott C. Ritchie, Sean G. Byars, Liam G. Fearnley, Aki S. Havulinna, Anni Joensuu, Antti J. Kangas, Pasi Soininen, Annika Wennerström, Lili Milani, Andres Metspalu, Satu Männistö, Peter Würtz, Johannes Kettunen, Emma Raitoharju, Mika Kähönen, Markus Juonala, Aarno Palotie, Mika Ala‐Korpela, Samuli Ripatti, Terho Lehtimäki, Gad Abraham, Olli T. Raitakari, Veikko Salomaa, Markus Perola, Michael Inouye
Software Mentions: 2
Published: almost 8 years ago
10.1002/mgg3.742
Systematic genetic analyses of GWAS data reveal an association between the immune system and insomniaCited by: 9
Author(s): Bo Xiang, Kezhi Liu, Minglan Yu, Xuemei Liang, Chaohua Huang, Jin Zhang, Wenying He, Lei Wei, Jing Chen, Xingfang Gu, KeWei Gong
Software Mentions: 2
Published: about 6 years ago
10.3389/fnagi.2021.727928
Preservation Analysis on Spatiotemporal Specific Co-expression Networks Suggests the Immunopathogenesis of Alzheimer’s DiseaseCited by: 0
Author(s): Liyuan Guo, Yushan Liu, Jing Wang
Software Mentions: 1
Published: almost 4 years ago