Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3390/life11070716
https://doi.org/10.3390/life11070716
Single-Cell Transcriptome Profiling Simulation Reveals the Impact of Sequencing Parameters and Algorithms on Clustering
Cited by: 0
Author(s): Yunhe Liu, Aoshen Wu, Xueqing Peng, Xiaona Liu, Gang Liu, Lei Liu
Published: over 3 years ago
Software Mentions 15
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: splatter
Simple Simulation of Single-cell RNA Sequencing DataPapers that mentioned: 6
bioconductor: SPsimSeq
Semi-parametric simulation tool for bulk and single-cell RNA sequencing dataPapers that mentioned: 4
cran: phateR
PHATE - Potential of Heat-Diffusion for Affinity-Based Transition EmbeddingPapers that mentioned: 4
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut ImplementationPapers that mentioned: 255
pypi: splatter
Vizualizing multidimensional points in a pleasing and informative wayPapers that mentioned: 6
pypi: SymSim
Tool for simulating planes of symmetries assuming kinematic diffractionPapers that mentioned: 7