Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: SPsimSeq
https://packages.ecosyste.ms/registries/bioconductor.org/packages/SPsimSeq
Semi-parametric simulation tool for bulk and single-cell RNA sequencing data
1 version
Latest release: 10 months ago
1 dependent package
3,393 downloads total
Papers Mentioning SPsimSeq 4
10.3390/life11070716
Single-Cell Transcriptome Profiling Simulation Reveals the Impact of Sequencing Parameters and Algorithms on ClusteringCited by: 0
Author(s): Yunhe Liu, Aoshen Wu, Xueqing Peng, Xiaona Liu, Gang Liu, Lei Liu
Software Mentions: 15
Published: about 3 years ago
10.1186/s13059-021-02367-2
scDesign2: a transparent simulator that generates high-fidelity single-cell gene expression count data with gene correlations capturedCited by: 40
Author(s): Tianyi Sun, Dongyuan Song, Jingyi Jessica Li, Jingyi Jessica Li
Software Mentions: 7
Published: about 3 years ago
10.1186/s12864-020-6721-y
On the utility of RNA sample pooling to optimize cost and statistical power in RNA sequencing experimentsCited by: 50
Author(s): Alemu Takele Assefa, Jo Vandesompele, Olivier Thas
Software Mentions: 3
Published: over 4 years ago
10.1186/s13059-021-02394-z
Publisher Correction: scDesign2: a transparent simulator that generates high-fidelity single-cell gene expression count data with gene correlations capturedCited by: 0
Author(s): Tianyi Sun, Dongyuan Song, Jingyi Jessica Li, Jingyi Jessica Li
Software Mentions: 1
Published: about 3 years ago