pypi: ggplot | Projects | Ecosyste.ms: Papers

10.3390/ijerph17030778

Social Support and Subclinical Coronary Artery Disease in Middle-Aged Men and Women: Findings from the Pilot of Swedish CArdioPulmonary bioImage Study
Cited by: 1
Author(s): Demir Djekic, Erika Fagman, Oskar Angerås, George Lappas, Kjell Torén, Göran Bergström, Annika Rosengren
Software Mentions: 7
Published: almost 5 years ago

10.1371/journal.pntd.0009607

One hundred years of zoonoses research in the Horn of Africa: A scoping review
Cited by: 17
Author(s): Lisa Cavalerie, Maya Wardeh, Ophélie Lebrasseur, Mark Nanyingi, K. Marie McIntyre, Mirgissa Kaba, Daniel Asrat, Robert M. Christley, Gina Pinchbeck, Matthew Baylis, Siobhan M. Mor
Software Mentions: 7
Published: over 3 years ago

10.1007/s00253-021-11475-9

Do initial concentration and activated sludge seasonality affect pharmaceutical biotransformation rate constants?
Cited by: 10
Author(s): Tamara J. H. M. van Bergen, Ana B. Rios‐Miguel, Tom M. Nolte, A.M.J. Ragas, Rosalie van Zelm, Martien H.F. Graumans, Paul T.J. Scheepers, Mike S. M. Jetten, A. Jan Hendriks, Cornelia U. Welte
Software Mentions: 7
Published: over 3 years ago

10.1002/glia.23767

Transcriptional profiling of microglia; current state of the art and future perspectives
Cited by: 72
Author(s): Emma Gerrits, Yang Heng, Erik Boddeke, Bart J. L. Eggen
Software Mentions: 7
Published: almost 5 years ago

10.1371/journal.pcbi.1006169

riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data
Cited by: 115
Author(s): Fabio Lauria, Toma Tebaldi, Paola Bernabò, Ewout J N Groen, Thomas H. Gillingwater, Gabriella Viero
Software Mentions: 7
Published: over 6 years ago

10.1098/rstb.2019.0086

Targeted metagenomic recovery of four divergent viruses reveals shared and distinctive characteristics of giant viruses of marine eukaryotes
Cited by: 22
Author(s): David M. Needham, Camille Poirier, Elisabeth Hehenberger, Valeria Jiménez, Jarred Swalwell, Alyson E. Santoro, Alexandra Z. Worden
Software Mentions: 7
Published: about 5 years ago

10.3390/genes11020226

Integrative Analysis Identifies Candidate Tumor Microenvironment and Intracellular Signaling Pathways that Define Tumor Heterogeneity in NF1
Cited by: 10
Author(s): Jineta Banerjee, Robert J. Allaway, Jaclyn N. Taroni, Aaron Baker, Xiaochun Zhang, Chang In Moon, Christine A. Pratilas, Jaishri O. Blakeley, Justin Guinney, Angela C. Hirbe, Casey S. Greene
Software Mentions: 7
Published: over 4 years ago

10.1186/s12885-020-07345-8

Identification of a metabolism-related gene expression prognostic model in endometrial carcinoma patients
Cited by: 19
Author(s): Pinping Jiang, Wei Sun, Ningmei Shen, Xin Huang, Shilong Fu
Software Mentions: 7
Published: about 4 years ago

10.1186/s12885-020-07615-5

Genomics and prognosis analysis of epithelial-mesenchymal transition in colorectal cancer patients
Cited by: 15
Author(s): Zizhen Zhang, Shu Zheng, Yaowang Lin, Jiawei Sun, Ning Ding, Jingyu Chen, Jing Zhong, Liuhong Shi, Min Xue
Software Mentions: 7
Published: almost 4 years ago

10.1038/s41598-020-78471-3

Cellular correlates of cortical thinning throughout the lifespan
Cited by: 68
Author(s): Didac Vidal‐Piñeiro, Nadine Parker, Jean Shin, Leon French, Håkon Grydeland, Andrea Parolin Jackowski, Athanasia M. Mowinckel, Yash Patel, Zdenka Pausová, Giovanni Abrahão Salum, Øystein Sørensen, Kristine B. Walhovd, Tomáš Paus, Anders M. Fjell, Alzheimer’s Disease Neuroimaging Initiative
Software Mentions: 7
Published: almost 4 years ago

10.3389/fvets.2018.00269

The Use of Kernel Density Estimation With a Bio-Physical Model Provides a Method to Quantify Connectivity Among Salmon Farms: Spatial Planning and Management With Epidemiological Relevance
Cited by: 27
Author(s): Danielle L. Cantrell, Erin E. Rees, Raphaël Vanderstichel, Jon E. Grant, Ramón Filgueira, Crawford W. Revie
Software Mentions: 7
Published: about 6 years ago

10.1038/s42003-020-01175-x

Genetic alterations in the 3q26.31-32 locus confer an aggressive prostate cancer phenotype
Cited by: 3
Author(s): Benjamin S. Simpson, Niedzica Camacho, Hayley J. Luxton, Hayley Pye, Ron Finn, Susan Heavey, Jason J. Pitt, Caroline M. Moore, Hayley C. Whitaker
Software Mentions: 7
Published: over 4 years ago

10.3389/fvets.2020.00214

Cultural “Blind Spots,” Social Influence and the Welfare of Working Donkeys in Brick Kilns in Northern India
Cited by: 16
Author(s): Tamlin Watson, Laura M Kubasiewicz, Natasha Chamberlain, Caroline Nye, Zoe Raw, Faith Burden
Software Mentions: 7
Published: over 4 years ago

10.3389/fphar.2020.586345

Antimicrobial Activity of Necklace Orchids is Phylogenetically Clustered and can be Predicted With a Biological Response Method
Cited by: 5
Author(s): Richa Kusuma Wati, Esmée F. de Graaf, Diego Bogarín, Reinout Heijungs, Rogier van Vugt, Erik Smets, Barbara Gravendeel
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0198311

GCalignR: An R package for aligning gas-chromatography data for ecological and evolutionary studies
Cited by: 35
Author(s): Meinolf Ottensmann, Martin Stoffel, Hazel J. Nichols, Joseph I. Hoffman
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-021-93918-x

Probiotic supplementation reduces inflammatory profiles but does not prevent oral immune perturbations during SIV infection
Cited by: 4
Author(s): Rhianna Jones, Kyle Kroll, Courtney Broedlow, Luca Schifanella, Scott Smith, Brady Hueber, Spandan V. Shah, Daniel R. Ram, Cordelia Manickam, Valerie Varner, Nichole R. Klatt, R. Keith Reeves
Software Mentions: 7
Published: over 3 years ago

10.7717/peerj.5489

The ability of magnetic field sensors to monitor feeding in three domestic herbivores
Cited by: 3
Author(s): Christina Mulvenna, Rory P. Wilson, Nikki J. Marks, Aaron G. Maule, David Scantlebury
Software Mentions: 7
Published: about 6 years ago

10.3389/fpls.2017.01005

Dominant Groups of Potentially Active Bacteria Shared by Barley Seeds become Less Abundant in Root Associated Microbiome
Cited by: 56
Author(s): Luhua Yang, Jasmin Danzberger, Anne Schöler, Peter Schröder, Michael Schloter, Viviane Radl
Software Mentions: 7
Published: over 7 years ago

10.1038/s41598-019-40604-8

Structure and evolutionary implications of the earliest (Sinemurian, Early Jurassic) dinosaur eggs and eggshells
Cited by: 24
Author(s): Koen Stein, Edina Prondvai, Timothy D. Huang, Jean-Marc Baele, P. Martin Sander, Robert R. Reisz
Software Mentions: 7
Published: over 5 years ago

10.1186/s13071-020-04522-3

High dispersal capacity of Culicoides obsoletus (Diptera: Ceratopogonidae), vector of bluetongue and Schmallenberg viruses, revealed by landscape genetic analyses
Cited by: 10
Author(s): Antoine Mignotte, Claire Garros, Simon Dellicour, Maude Jacquot, Marius Gilbert, Laëtitia Gardès, Thomas Balenghien, Maxime Duhayon, Ignace Rakotoarivony, Maïa de Wavrechin, Karine Huber
Software Mentions: 7
Published: almost 4 years ago

10.7717/peerj.5727

An automated, high-throughput method for standardizing image color profiles to improve image-based plant phenotyping
Cited by: 30
Author(s): Jeffrey C. Berry, Noah Fahlgren, Alexandria A Pokorny, Rebecca Bart, Kira M. Veley
Software Mentions: 7
Published: about 6 years ago

10.7717/peerj.3944

Skin and fur bacterial diversity and community structure on American southwestern bats: effects of habitat, geography and bat traits
Cited by: 24
Author(s): Ara S. Winter, Jennifer J.M. Hathaway, Jason C. Kimble, Debbie C. Buecher, Ernest W. Valdez, Andrea Porras-Alfaro, Jesse M. Young, Kaitlyn J. H. Read, Diana E. Northup
Software Mentions: 7
Published: about 7 years ago

10.3389/fneur.2019.00102

Acute Endovascular Treatment of Patients With Ischemic Stroke From Intracranial Large Vessel Occlusion and Extracranial Carotid Dissection
Cited by: 20
Author(s): Kars C.J. Compagne, Robert‐Jan B. Goldhoorn, Maarten Uyttenboogaart, Robert J. van Oostenbrugge, Wim H. van Zwam, Pieter Jan van Doormaal, Diederik W.J. Dippel, Aad van der Lugt, Bart J. Emmer, Adriaan C.G.M. van Es
Software Mentions: 7
Published: almost 6 years ago

10.1186/s12866-020-01907-3

The gut mycobiota of rural and urban individuals is shaped by geography
Cited by: 23
Author(s): Mubanga Hellen Kabwe, Surendra Vikram, Khodani Mulaudzi, Janet K. Jansson, Thulani P. Makhalanyane
Software Mentions: 7
Published: over 4 years ago

10.3390/nu10091254

Changes in Plasma Acylcarnitine and Lysophosphatidylcholine Levels Following a High-Fructose Diet: A Targeted Metabolomics Study in Healthy Women
Cited by: 26
Author(s): Anita Gonzalez‐Granda, Antje Damms-Machado, Maryam Basrai, Stephan C. Bischoff
Software Mentions: 7
Published: about 6 years ago

10.1371/journal.pone.0248398

Productive wetlands restored for carbon sequestration quickly become net CO2 sinks with site-level factors driving uptake variability
Cited by: 27
Author(s): Amy Valach, Kuno Kasak, Kyle S. Hemes, Tyler L. Anthony, Iryna Dronova, Sophie Taddeo, Whendee L. Silver, Daphne Szutu, Joseph Verfaillie, Dennis Baldocchi
Software Mentions: 7
Published: over 3 years ago

10.2196/19791

Investigating the Prevalence of Reactive Online Searching in the COVID-19 Pandemic: Infoveillance Study
Cited by: 27
Author(s): Rafael A Badell-Grau, Jordan P. Cuff, Brendan P. Kelly, Helen Waller-Evans, Emyr Lloyd-Evans
Software Mentions: 7
Published: about 4 years ago

10.3389/fmicb.2020.00765

Exploring the Relationship Among Divergence Time and Coding and Non-coding Elements in the Shaping of Fungal Mitochondrial Genomes
Cited by: 10
Author(s): Paula Luize Camargos Fonseca, Fernanda Badotti, Ruth B De-Paula, Daniel S. Araújo, Dener Eduardo Bortolini, Luiz-Eduardo Del-Bem, Vasco Azevedo, Bertram Brenig, Eric Roberto Guimarães Rocha Aguiar, Aristóteles Goés-Neto
Software Mentions: 7
Published: over 4 years ago

10.3390/jpm10040201

Altered Interoceptive Perception and the Effects of Interoceptive Analgesia in Musculoskeletal, Primary, and Neuropathic Chronic Pain Conditions
Cited by: 26
Author(s): Daniele Di Lernia, Marco Lacerenza, Vivien Ainley, Giuseppe Riva
Software Mentions: 7
Published: about 4 years ago

10.12688/f1000research.16032.3

epiflows: an R package for risk assessment of travel-related spread of disease
Cited by: 3
Author(s): Paula Moraga, Ilaria Dorigatti, Zhian N. Kamvar, Paweł Piątkowski, Salla Toikkanen, VP Nagraj, Christl A. Donnelly, Thibaut Jombart
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0236142

Diet flexibility and growth of the early herbivorous juvenile crown-of-thorns sea star, implications for its boom-bust population dynamics
Cited by: 17
Author(s): Dione J. Deaker, Benjamin Mos, Huang-An Lin, Corinne Lawson, Claire Budden, Symon A. Dworjanyn, Maria Byrne
Software Mentions: 7
Published: over 4 years ago

10.1186/s12859-017-1974-4

CORNAS: coverage-dependent RNA-Seq analysis of gene expression data without biological replicates
Cited by: 14
Author(s): Joel Zi-Bin Low, Tsung Fei Khang, Martti T. Tammi
Software Mentions: 7
Published: almost 7 years ago

10.3389/fmicb.2021.664542

Nutrient-Poor Breeding Substrates of Ambrosia Beetles Are Enriched With Biologically Important Elements
Cited by: 10
Author(s): Maximilian Lehenberger, Nina Foh, Axel Göttlein, Diana L. Six, Peter H. W. Biedermann
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pgen.1009038

Selection and hybridization shaped the rapid spread of African honey bee ancestry in the Americas
Cited by: 40
Author(s): Erin Calfee, Marcelo Nicolás Agra, María Alejandra Palacio, Santiago R. Ramírez, Graham Coop
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0243420

Characterizing the genetic diversity of the Andean blueberry (Vaccinium floribundum Kunth.) across the Ecuadorian Highlands
Cited by: 9
Author(s): Pamela Vega-Polo, María Mercedes Cobo, Andrea Argudo, Bernardo Gutiérrez, Jennifer K. Rowntree, María de Lourdes Torres
Software Mentions: 6
Published: almost 4 years ago

10.7150/jca.50413

Construction of a Glycolysis-related long noncoding RNA signature for predicting survival in endometrial cancer
Cited by: 27
Author(s): Yuan Jiang, Jie Chen, Jiwei Ling, Xiaonian Zhu, Pinping Jiang, Xiaohu Tang, Huaqiang Zhou, Rong Li
Software Mentions: 6
Published: almost 4 years ago

10.7554/eLife.59733

Activation of a neural stem cell transcriptional program in parenchymal astrocytes
Cited by: 41
Author(s): Jens P Magnusson, Margherita Zamboni, Giuseppe Santopolo, Jeff E. Mold, Mauricio Barrientos‐Somarribas, Carlos Talavera-López, Björn Andersson, Jonas Frisén
Software Mentions: 6
Published: over 4 years ago

10.7554/eLife.53898

The skin microbiome facilitates adaptive tetrodotoxin production in poisonous newts
Cited by: 44
Author(s): Patric M Vaelli, Kevin R. Theis, Janet E. Williams, Lauren A. O’Connell, James A. Foster, Heather L. Eisthen
Software Mentions: 6
Published: over 4 years ago

10.1093/gigascience/giaa137

Long-read assembly of the <i>Brassica napus</i> reference genome Darmor-bzh
Cited by: 50
Author(s): Mathieu Rousseau‐Gueutin, Caroline Belser, Corinne Da Silva, Gautier Richard, Benjamin Istace, Corinne Cruaud, Cyril Falentin, Franz Boideau, Julien Boutte, Régine Delourme, Gwenaëlle Deniot, Stéfan Engelen, Julie Ferreira de Carvalho, Arnaud Lemainque, Loeiz Maillet, Jérôme Morice, Patrick Wincker, Anne‐Marie Chèvre, Jean‐Marc Aury
Software Mentions: 6
Published: almost 4 years ago

10.7554/eLife.62520

Distinct neural mechanisms underlie subjective and objective recollection and guide memory-based decision making
Cited by: 5
Author(s): Yana Fandakova, Elliott G. Johnson, Simona Ghetti
Software Mentions: 6
Published: over 3 years ago

10.7150/ijms.49126

Construction and validation of a three-microRNA signature as prognostic biomarker in patients with hepatocellular carcinoma
Cited by: 9
Author(s): Xi Zhang, Li Ma, Li Zhai, Dong Chen, Yong Li, Zhongjun Shang, Zongmei Zhang, Yu Gao, Wei Yang, Yixun Li, Yu‐Qing Pan
Software Mentions: 6
Published: almost 4 years ago

10.7554/eLife.60083

Arrayed CRISPRi and quantitative imaging describe the morphotypic landscape of essential mycobacterial genes
Cited by: 38
Author(s): Timothy J. de Wet, Kirstin Winkler, Musa M. Mhlanga, Valerie Mizrahi, Digby F. Warner
Software Mentions: 6
Published: about 4 years ago

10.3389/fcvm.2021.696321

Bioinformatics and Immune Infiltration Analyses Reveal the Key Pathway and Immune Cells in the Pathogenesis of Hypertrophic Cardiomyopathy
Cited by: 11
Author(s): Xuzhe Zhang, Si Zhang, Tingting Tang, Xiang Cheng
Software Mentions: 6
Published: about 3 years ago

10.3389/fnagi.2021.602781

Exploring the Key Genes and Identification of Potential Diagnosis Biomarkers in Alzheimer’s Disease Using Bioinformatics Analysis
Cited by: 20
Author(s): Wuhan Yu, Weihua Yu, Yan Yang, Yang Lü
Software Mentions: 6
Published: over 3 years ago

10.1128/mSystems.00423-19

Network Analysis of the Papaya Orchard Virome from Two Agroecological Regions of Chiapas, Mexico
Cited by: 25
Author(s): Ricardo I. Alcalá-Briseño, Kena Casarrubias-Castillo, Diana López-Ley, Karen A. Garrett, Laura Silva-Rosales
Software Mentions: 6
Published: almost 5 years ago

10.1186/1471-2164-12-544

Prediction of RNA Polymerase II recruitment, elongation and stalling from histone modification data
Cited by: 29
Author(s): Yun Chen, Mette Jørgensen, Raivo Kolde, Xiaobei Zhao, Brian J. Parker, Eivind Valen, Jiayu Wen, Albin Sandelin
Software Mentions: 6
Published: about 13 years ago

10.3390/genes12081240

Genomic Variation Shaped by Environmental and Geographical Factors in Prairie Cordgrass Natural Populations Collected across Its Native Range in the USA
Cited by: 0
Author(s): Jia Guo, Patrick J. Brown, A. Lane Rayburn, Carolyn J. Butts-Wilmsmeyer, Arvid Boe, DoKyoung Lee
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0254607

Disseminated disease due to non-tuberculous mycobacteria in HIV positive patients: A retrospective case control study
Cited by: 3
Author(s): Nils Wetzstein, Ari Geil, Gerrit Kann, Annette Lehn, Gundolf Schüttfort, Johanna Kessel, Tobias M. Bingold, Claus P. Küpper-Tetzel, Annette Haberl, Christiana Graf, Maria J. G. T. Vehreschild, Christoph Stephan, Michael Hogardt, Thomas A. Wichelhaus, Timo Wolf
Software Mentions: 6
Published: over 3 years ago

10.1128/AEM.02555-20

Microbial Community Shifts Reflect Losses of Native Soil Carbon with Pyrogenic and Fresh Organic Matter Additions and Are Greatest in Low-Carbon Soils
Cited by: 6
Author(s): Thea Whitman, Silene DeCiucies, Kelly Hanley, Akio Enders, Jamie Woolet, Johannes Lehmann
Software Mentions: 6
Published: over 3 years ago

10.3389/fimmu.2020.583644

Fusobacterium nucleatum Extracellular Vesicles Modulate Gut Epithelial Cell Innate Immunity via FomA and TLR2
Cited by: 27
Author(s): Camille Martin-Gallausiaux, Antoine Malabirade, Janine Habier, Paul Wilmes
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pone.0101556

Diversity, Abundance and Community Structure of Benthic Macro- and Megafauna on the Beaufort Shelf and Slope
Cited by: 21
Author(s): Jessica Nephin, S. Kim Juniper, Philippe Archambault
Software Mentions: 6
Published: over 10 years ago

10.1371/journal.pone.0231215

Characterization of plant growth-promoting bacteria associated with avocado trees (Persea americana Miller) and their potential use in the biocontrol of Scirtothrips perseae (avocado thrips)
Cited by: 18
Author(s): Jorge A. Tzec-Interián, Damaris Desgarennes, Gloria Carrión, Juan L. Monribot‐Villanueva, José A. Guerrero‐Analco, Ofelia Ferrera-Rodríguez, Dulce Lizbeth Santos-Rodríguez, Nut Liahut-Guin, Gerardo Emmanuel Caballero-Reyes, Randy Ortíz-Castro
Software Mentions: 6
Published: over 4 years ago

10.1186/s12876-021-01734-4

Identification of the angiogenesis related genes for predicting prognosis of patients with gastric cancer
Cited by: 9
Author(s): Shu Zheng, Zizhen Zhang, Ning Ding, Jiawei Sun, Yaowang Lin, Jingyu Chen, Jing Zhong, Liming Shao, Zhenghua Lin, Min Xue
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0236186

Gene co-expression network analysis to identify critical modules and candidate genes of drought-resistance in wheat
Cited by: 16
Author(s): Liangjie Lv, Wenying Zhang, Lijing Sun, Aiju Zhao, Yingjun Zhang, Limei Wang, Yuping Liu, Ziqian Li, Xiyong Chen
Software Mentions: 6
Published: about 4 years ago

10.7150/ijbs.62553

DDX39 as a predictor of clinical prognosis and immune checkpoint therapy efficacy in patients with clear cell renal cell carcinoma
Cited by: 11
Author(s): Yewei Bao, Aimin Jiang, Kai Dong, Xinxin Gan, Wenliang Gong, Zhenjie Wu, Bing Liu, Yi Bao, Jie Wang, Linhui Wang
Software Mentions: 6
Published: almost 4 years ago

10.3390/ijms22115814

Genomic Characterization of Cisplatin Response Uncovers Priming of Cisplatin-Induced Genes in a Resistant Cell Line
Cited by: 7
Author(s): Hadar Golan Berman, Pooja Chauhan, Shira Shalev, Hiba Hassanain, Avital Parnas, Sheera Adar
Software Mentions: 6
Published: over 3 years ago

10.1002/ece3.7080

Linking radial growth patterns and moderate‐severity disturbance dynamics in boreal old‐growth forests driven by recurrent insect outbreaks: A tale of opportunities, successes, and failures
Cited by: 2
Author(s): Maxence Martin, Cornélia Krause, Hubert Morin
Software Mentions: 6
Published: almost 4 years ago

10.3390/plants10071460

Novel Metrics to Characterize In Vitro Pollen Tube Growth Performance of Apple Cultivars
Cited by: 1
Author(s): Stefan Roeder, Sara Serra, Stefano Musacchi
Software Mentions: 6
Published: over 3 years ago

10.1186/s12862-020-01664-x

Spider phylosymbiosis: divergence of widow spider species and their tissues’ microbiomes
Cited by: 14
Author(s): Sara Jeanne Dunaj, Brian R. Bettencourt, Jessica E. Garb, Robert M. Brucker
Software Mentions: 6
Published: over 4 years ago

10.3390/plants9020197

Tomato Phenotypic Diversity Determined by Combined Approaches of Conventional and High-Throughput Tomato Analyzer Phenotyping
Cited by: 19
Author(s): Amol N. Nankar, Ivanka Tringovska, Stanislava Grozeva, D. Ganeva, D. Kostova
Software Mentions: 6
Published: almost 5 years ago

10.1002/ece3.3272

How shrub encroachment under climate change could threaten pollination services for alpine wildflowers: A case study using the alpine skypilot,<i>Polemonium viscosum</i>
Cited by: 8
Author(s): Jessica A. Kettenbach, Nicole E. Miller‐Struttmann, Zoë Moffett, Candace Galen
Software Mentions: 6
Published: over 7 years ago

10.1038/s41598-021-92405-7

Microplastics accumulate fungal pathogens in terrestrial ecosystems
Cited by: 73
Author(s): Gerasimos Gkoutselis, Stephan Rohrbach, Janno Harjes, Martin Obst, Andreas Brachmann, Marcus A. Horn, Gerhard Rambold
Software Mentions: 6
Published: over 3 years ago

10.1111/eva.13227

No leading‐edge effect in North Atlantic harbor porpoises: Evolutionary and conservation implications
Cited by: 2
Author(s): Yacine Ben Chehida, Roisin Loughnane, Julie Thumloup, Kristin Kaschner, Cristina Garilao, Patricia E. Rosel, Michaël C. Fontaine
Software Mentions: 6
Published: over 3 years ago

10.18632/aging.202474

Clinical and genomic characteristics of metabolic syndrome in colorectal cancer
Cited by: 2
Author(s): Yanyan Li, Jungang Zhao, Xiaoli Wu, Yini Zhang, Jia Yin, Weiyang Cai
Software Mentions: 6
Published: almost 4 years ago

10.3390/plants10061039

Comparative Analysis of Re-Annotated Genes Provides Insight into Evolutionary Divergence and Expressions of Aquaporin Family in Pepper
Cited by: 2
Author(s): Yeon Mi Lee, Geun Young Chae, Min Kyung Kim, Seungill Kim
Software Mentions: 6
Published: over 3 years ago

10.3390/genes9080392

RNA Structure Elements Conserved between Mouse and 59 Other Vertebrates
Cited by: 16
Author(s): Bernhard C. Thiel, Roman Ochsenreiter, Veerendra P. Gadekar, Andrea Tanzer, Ivo L. Hofacker
Software Mentions: 6
Published: over 6 years ago

10.1186/s13567-015-0177-0

Vaccination of pigs with the S48 strain of Toxoplasma gondii – safer meat for human consumption
Cited by: 42
Author(s): Alison Burrells, Julio Benavides, Germán Cantón, João Luís Garcia, Paul M. Bartley, Mintu Nath, Jackie Thomson, Francesca Chianini, Elisabeth A. Innes, Frank Katzer
Software Mentions: 6
Published: over 9 years ago

10.1038/s41598-021-85256-9

Creation and validation of models to predict response to primary treatment in serous ovarian cancer
Cited by: 11
Author(s): Jesús González Bosquet, Eric J. Devor, A.M. Newtson, Brian J. Smith, David Bender, Michael J. Goodheart, Megan McDonald, Terry A. Braun, Kristina W. Thiel, Kimberly K. Leslie
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-021-95648-6

Four consecutive yearly point-prevalence studies in Wales indicate lack of improvement in sepsis care on the wards
Cited by: 1
Author(s): Maja Kopczynska, Harry Unwin, Richard Pugh, Ben Sharif, Thomas Chandy, Daniel Davies, Matthew E. Shield, David Purchase, Samuel C. Tilley, Arwel T Poacher, Lewis Oliva, Sam Willis, Isabelle Ray, John Ng C. Hui, Bethany Payne, Eilis Frances Wardle, Fiona Andrew, Hei Man Priscilla Chan, Jack Barrington, Jay Hale, Joanna Hawkins, Jess K. Nicholas, Lara E. Wirt, Lowri Hughes Thomas, Megan Walker, Myat P. Pan, Tallulah Ray, Umair Asim, Victoria Maidman, Zeid Atiyah, Zain M. Nasser, Zhao Xuan Tan, Laura Tan, Tamás Szakmány
Software Mentions: 6
Published: over 3 years ago

10.3389/fpls.2021.619062

Genome-Wide Identification and Characterization of Potato Long Non-coding RNAs Associated With Phytophthora infestans Resistance
Cited by: 5
Author(s): Weilin Cao, Li‐Ming Gan, Chenchen Wang, Xuan Zhao, Mingyu Zhang, Jinyan Du, Shumei Zhou, Changxiang Zhu
Software Mentions: 6
Published: almost 4 years ago

10.1038/s41598-020-79835-5

Local knowledge as a tool for prospecting wild food plants: experiences in northeastern Brazil
Cited by: 11
Author(s): Patrícia Muniz de Medeiros, Gabriela Maria Cota dos Santos, Déborah Monteiro Barbosa, Laílson César Andrade Gomes, Élida Monique da Costa Santos, Rafael Ricardo Vasconcelos da Silva
Software Mentions: 6
Published: almost 4 years ago

10.3390/bs10120194

Anxiety-Related Attention Bias in Four- to Eight-Year-Olds: An Eye-Tracking Study
Cited by: 4
Author(s): Suzannah Stuijfzand, Bobby Stuijfzand, Shirley Reynolds, Helen F. Dodd
Software Mentions: 6
Published: almost 4 years ago

10.3389/fphys.2021.622987

Olfactory Dysfunction in Frontline Health Care Professionals During COVID-19 Pandemic in Brazil
Cited by: 7
Author(s): Mariana Ferreira Sbrana, Marco Aurélio Fornazieri, Alexandre Bruni‐Cardoso, Vivian Iida Avelino‐Silva, Deborah Schechtman, Richard Louis Voegels, Bettina Malnic, Isaías Glezer, Fábio de Rezende Pinna
Software Mentions: 6
Published: over 3 years ago

10.1098/rstb.2020.0366

Phanerozoic parasitism and marine metazoan diversity: dilution versus amplification
Cited by: 16
Author(s): Kenneth De Baets, John Warren Huntley, Daniele Scarponi, Adiël A. Klompmaker, Aleksandra Skawina
Software Mentions: 6
Published: about 3 years ago

10.3390/genes11060655

Transcriptional Basis for Differential Thermosensitivity of Seedlings of Various Tomato Genotypes
Cited by: 5
Author(s): Yangjie Hu, Sotirios Fragkostefanakis, Enrico Schleiff, Stefan Simm
Software Mentions: 6
Published: over 4 years ago

10.1186/s12915-021-01010-7

Engineered sex ratio distortion by X-shredding in the global agricultural pest Ceratitis capitata
Cited by: 22
Author(s): Angela Meccariello, Flávia Krsticevic, Rita Colonna, Giuseppe Del Corsano, Barbara Fasulo, Philippos Aris Papathanos, Nikolai Windbichler
Software Mentions: 6
Published: over 3 years ago

10.3390/v10090512

Robust Innate Immunity of Young Rabbits Mediates Resistance to Rabbit Hemorrhagic Disease Caused by Lagovirus Europaeus GI.1 But Not GI.2
Cited by: 28
Author(s): Matthew J. Neave, Robyn N. Hall, Nina Huang, Kenneth A. McColl, Peter J. Kerr, Marion Hoehn, Jennifer Taylor, Tanja Strive
Software Mentions: 6
Published: about 6 years ago

10.1002/ece3.7729

Damselfly eggs alter their development rate in the presence of an invasive alien cue but not a native predator cue
Cited by: 7
Author(s): Andrzej Antoł, Szymon Śniegula
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0220953

COI metabarcoding primer choice affects richness and recovery of indicator taxa in freshwater systems
Cited by: 67
Author(s): Mehrdad Hajibabaei, Teresita M. Porter, Michael Wright, Josip Rudar
Software Mentions: 6
Published: about 5 years ago

10.1016/j.molcel.2021.02.034

POINT technology illuminates the processing of polymerase-associated intact nascent transcripts
Cited by: 44
Author(s): Rui Sousa-Luís, Geneviève Dujardin, Inna Zukher, Hiroshi Kimurâ, Carika Weldon, Maria Carmo‐Fonseca, Nick J. Proudfoot, Takayuki Nojima
Software Mentions: 6
Published: over 3 years ago

10.18632/aging.203087

Identification of RHOBTB2 aberration as an independent prognostic indicator in acute myeloid leukemia
Cited by: 5
Author(s): Peng Liu, Qinghai Ma, Hanxiang Chen, Li Zhang, Xiaoning Zhang
Software Mentions: 6
Published: over 3 years ago

10.1002/evl3.254

Ageing as “early-life inertia”: Disentangling life-history trade-offs along a lifetime of an individual
Cited by: 9
Author(s): Hanne Carlsson, Edward Ivimey‐Cook, Elizabeth M. L. Duxbury, Nathan Edden, Kris Sales, Alexei A. Maklakov
Software Mentions: 6
Published: about 3 years ago

10.1038/s41598-021-96987-0

Assessing the extent and timing of chemosensory impairments during COVID-19 pandemic
Cited by: 21
Author(s): Cinzia Cecchetto, Antonella Di Pizio, Federica Genovese, Orietta Calcinoni, Alberto Macchi, Andreas Dunkel, Kathrin Ohla, Sara Spinelli, Michael C. Farruggia, Paule V. Joseph, Anna Menini, Elena Cantone, Caterina Dinnella, Maria Paola Cecchini, Anna D’Errico, Carla Mucignat‐Caretta, Valentina Parma, Michele Dibattista
Software Mentions: 6
Published: about 3 years ago

10.1038/s41598-019-51447-8

Investigation of the temporal roaming behaviour of free-roaming domestic dogs in Indigenous communities in northern Australia to inform rabies incursion preparedness
Cited by: 19
Author(s): Elizabeth K. Maher, Michael P. Ward, Victoria Brookes
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-018-37512-8

Sheathless CE-MS based metabolic profiling of kidney tissue section samples from a mouse model of Polycystic Kidney Disease
Cited by: 22
Author(s): Elena Sánchez-López, Guinevere S. M. Kammeijer, Antonio L. Crego, Marı́a Luisa Marina, Rawi Ramautar, Dorien J.M. Peters, Oleg A. Mayboroda
Software Mentions: 6
Published: almost 6 years ago

10.1038/s41598-020-69905-z

A lncRNA landscape in breast cancer reveals a potential role for AC009283.1 in proliferation and apoptosis in HER2-enriched subtype
Cited by: 20
Author(s): Alberto Cedro‐Tanda, Magdalena Ríos-Romero, Sandra Romero-Córdoba, Mireya Cisneros-Villanueva, Rosa Rebollar-Vega, Luis Alfaro-Ruiz, Silvia Jiménez-Morales, Carlos Alberto Domínguez-Reyes, Felipe Villegas-Carlos, Alberto Tenorio-Torres, Verónica Bautista-Piña, Fredy Omar Beltrán-Anaya, Alfredo Hidalgo‐Miranda
Software Mentions: 6
Published: over 4 years ago

10.3390/microorganisms7120595

Dynamic Succession of Microbiota during Ensiling of Whole Plant Corn Following Inoculation with Lactobacillus buchneri and Lactobacillus hilgardii Alone or in Combination
Cited by: 40
Author(s): Pascal Drouin, Julien Tremblay, Frédérique Chaucheyras‐Durand
Software Mentions: 6
Published: about 5 years ago

10.3389/fonc.2021.634841

miRNA-Based Signature Associated With Tumor Mutational Burden in Colon Adenocarcinoma
Cited by: 7
Author(s): Weijie Xue, Yixiu Wang, Yuwei Xie, Caifeng Yang, Zhiqi Gong, Chunyang Guan, Chuanliang Wei, Chunhui Zhu, Zhaojian Niu
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0239154

Assessing the low complexity of protein sequences via the low complexity triangle
Cited by: 4
Author(s): Pablo Mier, Miguel A. Andrade‐Navarro
Software Mentions: 6
Published: almost 4 years ago

10.18632/aging.202280

Estradiol is significantly associated with prognosis in non-surgical liver cancer patients: from bench to bedside
Cited by: 4
Author(s): Rangrang Wang, Yuan Liu, Hongze Sun, Tao Wang, Changcan Li, Junwei Fan, Zhaowen Wang
Software Mentions: 6
Published: almost 4 years ago

10.1186/s40168-016-0207-9

Extending colonic mucosal microbiome analysis—assessment of colonic lavage as a proxy for endoscopic colonic biopsies
Cited by: 41
Author(s): Euan Watt, Matthew Gemmell, Susan H. Berry, Mark A. Glaire, Freda Farquharson, Petra Louis, Graeme I. Murray, Emad El-Omar, Georgina L. Hold
Software Mentions: 6
Published: almost 8 years ago

10.1371/journal.pone.0255139

De novo sequencing and analysis of the transcriptome of two highbush blueberry (Vaccinium corymbosum L.) cultivars ‘Bluecrop’ and ‘Legacy’ at harvest and following post-harvest storage
Cited by: 2
Author(s): María Cárcamo de la Concepción, Daniel J. Sargent, Nada Šurbanovski, Richard Colgan, Marco Moretto
Software Mentions: 6
Published: over 3 years ago

10.3389/fonc.2021.652211

Comprehensive Pan-Cancer Analysis Confirmed That ATG5 Promoted the Maintenance of Tumor Metabolism and the Occurrence of Tumor Immune Escape
Cited by: 18
Author(s): Chunxiao Xu, Yusheng Zang, Yuxiang Zhao, Weiqiang Cui, Hong Zhang, Yingcui Zhu, Man Xu
Software Mentions: 6
Published: over 3 years ago

10.1038/srep33696

Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
Cited by: 247
Author(s): Kristin Kaiser, Bernd Wemheuer, Vera Korolkow, Franziska Wemheuer, Heiko Nacke, Ingo Schöning, Marion Schrumpf, Rolf Daniel
Software Mentions: 6
Published: about 8 years ago

10.18632/aging.103832

Prognostic model of patients with liver cancer based on tumor stem cell content and immune process
Cited by: 7
Author(s): Jie Zhu, Miaomiao Gao, Yuchen Jin, Weiran Huang, Zhuo Huang, Zhengwei Xie
Software Mentions: 6
Published: about 4 years ago

10.1038/s41598-017-01498-6

An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of mass
Cited by: 64
Author(s): Juan Salamanca Viloria, Maria Francesca Allega, Matteo Lambrughi, Elena Papaleo
Software Mentions: 6
Published: over 7 years ago

10.3389/fmicb.2019.01108

A Systematic Approach to Identify and Characterize the Effectiveness and Safety of Novel Probiotic Strains to Control Foodborne Pathogens
Cited by: 35
Author(s): Diana Ayala, Peter W. Cook, Jorge G. Franco, Marie Bugarel, Kameswara Rao Kottapalli, Guy H. Loneragan, Mindy M. Brashears, Kendra K. Nightingale
Software Mentions: 6
Published: over 5 years ago

10.3389/fmicb.2019.02278

Assessment of Artificial and Natural Transport Mechanisms of Ice Nucleating Particles in an Alpine Ski Resort in Obergurgl, Austria
Cited by: 4
Author(s): Philipp Baloh, Nora Els, Robert O. David, Catherine Larose, Karin Whitmore, Birgit Sattler, Hinrich Grothe
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2021.640386

The Molecular Information About Deadwood Bacteriomes Partly Depends on the Targeted Environmental DNA
Cited by: 9
Author(s): Maraike Probst, Judith Ascher‐Jenull, Heribert Insam, María Gómez-Brandòn
Software Mentions: 6
Published: over 3 years ago

10.21203/rs.3.rs-80404/v1

Acute SARS-CoV-2 Infection is Highly Cytopathic, Elicits a Robust Innate Immune Response and is Efficiently Prevented by EIDD-2801
Cited by: 10
Author(s): Angela Wahl, Lisa E. Gralinski, Claire Johnson, Wenbo Yao, Martina Kovářová, Kenneth H. Dinnon, Hongwei Liu, Victoria J. Madden, Halina M. Krzystek, Chandrav De, Kristen White, Alexandra Schäfer, Tanzila Zaman, Sarah R. Leist, P. Grant, Kendra L. Gully, Frederic B. Askin, Edward P. Browne, Corbin D. Jones, Raymond J. Pickles, Ralph S. Baric, Javier García
Software Mentions: 6
Published: about 4 years ago

Projects: pypi: ggplot

Papers Mentioning ggplot 796