Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1098/rstb.2019.0086

https://doi.org/10.1098/rstb.2019.0086

Targeted metagenomic recovery of four divergent viruses reveals shared and distinctive characteristics of giant viruses of marine eukaryotes

Cited by: 22
Author(s): David M. Needham, Camille Poirier, Elisabeth Hehenberger, Valeria Jiménez, Jarred Swalwell, Alyson E. Santoro, Alexandra Z. Worden
Published: about 5 years ago

Software Mentions 7

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
cran: circlize
Circular Visualization
Papers that mentioned: 260
cran: kmer
Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Papers that mentioned: 240
cran: pvclust
Hierarchical Clustering with P-Values via Multiscale Bootstrap Resampling
Papers that mentioned: 442
pypi: barrnap
python package for barrnap
Papers that mentioned: 56
pypi: ggplot
ggplot for python
Papers that mentioned: 796
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071