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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pcbi.1006169

https://doi.org/10.1371/journal.pcbi.1006169

riboWaltz: Optimization of ribosome P-site positioning in ribosome profiling data

Cited by: 115
Author(s): Fabio Lauria, Toma Tebaldi, Paola Bernabò, Ewout J N Groen, Thomas H. Gillingwater, Gabriella Viero
Published: almost 7 years ago

Software Mentions 7

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
Very Likely Science (65)
bioconductor: BSgenome
Software infrastructure for efficient representation of full genomes and their SNPs
Papers that mentioned: 47
Very Likely Science (90)
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
Very Likely Science (90)
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
Very Likely Science (90)
bioconductor: RiboProfiling
Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation
Papers that mentioned: 11
Very Likely Science (75)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
pypi: ggplot
ggplot for python
Papers that mentioned: 796
Very Likely Science (100)