pypi: DataAnalysis | Projects | Ecosyste.ms: Papers

10.3389/fchem.2020.00138

A Matrix-Assisted Laser Desorption/Ionization—Mass Spectrometry Assay for the Relative Quantitation of Antennary Fucosylated N-Glycans in Human Plasma
Cited by: 15
Author(s): Osmond Rebello, Simone Nicolardi, Guinevere S. M. Lageveen-Kammeijer, Jan Nouta, Richard A. Gardner, Wilma E. Mesker, Rob A.E.M. Tollenaar, Daniel I. R. Spencer, Manfred Wuhrer, David Falck
Software Mentions: 1
Published: over 4 years ago

10.3389/fendo.2018.00450

Apart From Rhoptries, Identification of Toxoplasma gondii's O-GlcNAcylated Proteins Reinforces the Universality of the O-GlcNAcome
Cited by: 9
Author(s): Moyira Osny Aquino-Gil, Mattis Kupferschmid, Hosam Shams‐Eldin, Jörg Schmidt, Nao Yamakawa, Marlène Mortuaire, Frédéric Krzewinski, Stéphan Hardivillé, Edgar Zenteno, Christian Rolando, Fabrice Bray, Eduardo Pérez Campos, Jean François Dubremetz, Yobana Pérez-Cervera, Ralph Τ. Schwarz, Tony Lefebvre
Software Mentions: 1
Published: over 6 years ago

10.3390/ijms18020376

Cocoa and Grape Seed Byproducts as a Source of Antioxidant and Anti-Inflammatory Proanthocyanidins
Cited by: 81
Author(s): María de la Luz Cádiz-Gurrea, Isabel Borrás-Linares, Jesús Lozano‐Sánchez, Jorge Joven, Salvador Fernández-Arroyo, Antonio Segura‐Carretero
Software Mentions: 1
Published: almost 8 years ago

10.3389/fimmu.2020.02049

MS-Based Allotype-Specific Analysis of Polyclonal IgG-Fc N-Glycosylation
Cited by: 15
Author(s): Thomas Sénard, Andrea Gargano, David Falck, Steven W. de Taeye, Theo Rispens, Gestur Vidarsson, Manfred Wuhrer, Govert W. Somsen, Elena Domínguez‐Vega
Software Mentions: 1
Published: over 4 years ago

10.3389/fimmu.2018.01614

Glyco-Engineered Anti-Human Programmed Death-Ligand 1 Antibody Mediates Stronger CD8 T Cell Activation Than Its Normal Glycosylated and Non-Glycosylated Counterparts
Cited by: 20
Author(s): Christoph Goletz, Timo Lischke, Ulf Harnack, Phillip Schiele, Antje Danielczyk, Johanna Rühmann, Steffen Goletz
Software Mentions: 1
Published: over 6 years ago

10.3389/fimmu.2019.02102

Glutamine Metabolism in Both the Oxidative and Reductive Directions Is Triggered in Shrimp Immune Cells (Hemocytes) at the WSSV Genome Replication Stage to Benefit Virus Replication
Cited by: 19
Author(s): Shu Ting He, Der Yen Lee, Cheng Yi Tung, Chun Yuan Li, Han Ching Wang
Software Mentions: 1
Published: about 5 years ago

10.3390/ijms18122550

Aberrant Lipid Metabolism in Hepatocellular Carcinoma Revealed by Liver Lipidomics
Cited by: 68
Author(s): Li Zhao, Ming Guan, Yu Lin, Xiao Cui, Yangyang Zhang, Zhenwen Zhao, Jin Liang Zhu
Software Mentions: 1
Published: almost 7 years ago

10.3390/antiox8100460

Enhanced Recovery of Antioxidant Compounds from Hazelnut (Corylus avellana L.) Involucre Based on Extraction Optimization: Phytochemical Profile and Biological Activities
Cited by: 36
Author(s): Marius Emil Rusu, Ionel Fizeșan, Anca Pop, Ana-Maria Gheldiu, Andrei Mocan, Gianina Crişan, Laurian Vlase, Felicia Loghin, Daniela-Saveta Popa, Ioan Tomuță
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2020.552135

Lipidomic Analysis of Roseobacters of the Pelagic RCA Cluster and Their Response to Phosphorus Limitation
Cited by: 7
Author(s): Eleonora Silvano, Mingyu Yang, Mathias Wolterink, Helge-Ansgar Giebel, Meinhard Simon, David J. Scanlan, Yanlin Zhao, Yin Chen
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2020.587032

Utilization of Phenol as Carbon Source by the Thermoacidophilic Archaeon Saccharolobus solfataricus P2 Is Limited by Oxygen Supply and the Cellular Stress Response
Cited by: 2
Author(s): Jacqueline Wolf, Julia Koblitz, Andreas Albersmeier, Jörn Kalinowski, Bettina Siebers, Dietmar Schomburg, Meina Neumann‐Schaal
Software Mentions: 1
Published: almost 4 years ago

10.3389/fmicb.2012.00367

Characterization of Staufen1 Ribonucleoproteins by Mass Spectrometry and Biochemical Analyses Reveal the Presence of Diverse Host Proteins Associated with Human Immunodeficiency Virus Type 1
Cited by: 43
Author(s): Miroslav P. Milev, Mukunthan Ravichandran, Morgan F. Khan, David C. Schriemer, Andrew J. Mouland
Software Mentions: 1
Published: almost 13 years ago

10.3389/fmicb.2018.02725

Recovery of the Peptidoglycan Turnover Product Released by the Autolysin Atl in Staphylococcus aureus Involves the Phosphotransferase System Transporter MurP and the Novel 6-phospho-N-acetylmuramidase MupG
Cited by: 22
Author(s): Robert Maria Kluj, Patrick Ebner, M. Adámek, Nadine Ziemert, Christoph Mayer, Marina Borisova
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2017.00209

The Global Regulators Lrp, LeuO, and HexA Control Secondary Metabolism in Entomopathogenic Bacteria
Cited by: 24
Author(s): Yvonne Engel, Carina Windhorst, Xiaojun Lu, Heidi Goodrich‐Blair, Helge B. Bode
Software Mentions: 1
Published: almost 8 years ago

10.3390/antiox8090417

Biological and Chemical Insights of Beech (Fagus sylvatica L.) Bark: A Source of Bioactive Compounds with Functional Properties
Cited by: 40
Author(s): Corneliu Tănase, Andrei Mocan, Sanda Coșarcă, Alexandru Gâvan, Alexandru Nicolescu, Ana-Maria Gheldiu, Dan Cristian Vodnar, Daniela-Lucia Muntean, O. Crisan
Software Mentions: 1
Published: about 5 years ago

10.3389/fmicb.2021.642829

Selective Isolation of Multidrug-Resistant Pedobacter spp., Producers of Novel Antibacterial Peptides
Cited by: 8
Author(s): Joakim Bjerketorp, Jolanta J. Levenfors, Christina Nord, Bengt Guss, Bo Öberg, Anders Broberg
Software Mentions: 1
Published: over 3 years ago

10.3390/ijms19010207

Synthesized Heparan Sulfate Competitors Attenuate Pseudomonas aeruginosa Lung Infection
Cited by: 11
Author(s): Nicola Ivan Lorè, Noemi Veraldi, Camilla Riva, Barbara Sipione, Lorenza Spagnuolo, Ida De Fino, Medede Melessike, Elisa Calzi, Alessandra Bragonzi, Annamaria Naggi, Cristina Cigana
Software Mentions: 1
Published: almost 7 years ago

10.3389/fmicb.2018.02008

A General Protein O-Glycosylation Gene Cluster Encodes the Species-Specific Glycan of the Oral Pathogen Tannerella forsythia: O-Glycan Biosynthesis and Immunological Implications
Cited by: 14
Author(s): Markus B. Tomek, Daniel Maresch, Markus Windwarder, Valentin Friedrich, Bettina Janesch, Kristina Fuchs, Laura Neumann, Irene Nimeth, Nikolaus F. Zwickl, Juliane C. Dohm, Arun Everest‐Dass, Daniel Kolarich, Heinz Himmelbauer, Friedrich Altmann, Christina Schäffer
Software Mentions: 1
Published: about 6 years ago

10.3389/fmicb.2020.00885

Characterization and Genome Structure of Virulent Phage EspM4VN to Control Enterobacter sp. M4 Isolated From Plant Soft Rot
Cited by: 9
Author(s): Nguyễn Công Thành, Yuko Nagayoshi, Yasuhiro Fujino, Kazuhiro Iiyama, Naruto Furuya, Yasuaki Hiromasa, Takeo Iwamoto, Kunio Doi
Software Mentions: 1
Published: over 4 years ago

10.3389/fnut.2021.663233

“Thermal Peroxidation” of Dietary Pentapeptides Yields N-Terminal 1,2-Dicarbonyls
Cited by: 0
Author(s): Maria Bikaki, Roy N. Dsouza
Software Mentions: 1
Published: over 3 years ago

10.3389/fphar.2018.00007

Phytochemical Composition, Antioxidant, Antimicrobial and in Vivo Anti-inflammatory Activity of Traditionally Used Romanian Ajuga laxmannii (Murray) Benth. (“Nobleman’s Beard” – Barba Împăratului)
Cited by: 36
Author(s): Anca Toiu, Andrei Mocan, Laurian Vlase, Alina Elena Pârvu, Dan Cristian Vodnar, Ana Maria Gheldiu, Cadmiel Moldovan, Ilioara Oniga
Software Mentions: 1
Published: over 6 years ago

10.3389/fphar.2019.00334

Biologically Active Ajuga Species Extracts Modulate Supportive Processes for Cancer Cell Development
Cited by: 12
Author(s): Valentin Florian Rauca, Laurian Vlase, Zsombor Kristóf Nagy, Alina Sesărman, Ana-Maria Gheldiu, Andrei Mocan, Manuela Banciu, Anca Toiu
Software Mentions: 1
Published: over 5 years ago

10.3389/fphar.2021.630198

Integrating Constituents Absorbed into Blood, Network Pharmacology, and Quantitative Analysis to Reveal the Active Components in Rubus chingii var. suavissimus that Regulate Lipid Metabolism Disorder
Cited by: 0
Author(s): Man-Jing Jiang, Wan-Fang Huang, Shuai Huang, Yi-Xiang Lu, Yong Huang, Pei-Lin Du, Yaohua Li, Lan-Lan Fan
Software Mentions: 1
Published: over 3 years ago

10.3389/fphar.2020.581470

Targeting Oxidative Stress Reduction and Inhibition of HDAC1, MECP2, and NF-kB Pathways in Rats With Experimentally Induced Hyperglycemia by Administration of Thymus marshallianus Willd. Extracts
Cited by: 19
Author(s): Alexandra Sevastre-Berghian, Irina Ielciu, Andrei-Otto Mitre, Gabriela Adriana Filip, Ilioara Oniga, Laurian Vlase, Daniela Benedec, Ana-Maria Gheldiu, Vlad-Alexandru Toma, Bianca Mihart, Andra Mihuţ, Ioana Bâldea, Diana Olteanu, Irina Camelia Chiș, Simona Clichici, Daniela Hanganu
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2021.699424

Introduction of the Carotenoid Biosynthesis α-Branch Into Synechocystis sp. PCC 6803 for Lutein Production
Cited by: 7
Author(s): Martin Lehmann, Evgenia Vamvaka, Alejandro Torrado, Peter Jahns, Marcel Dann, Lea Rosenhammer, Amel Aziba, Dario Leister, Thilo Rühle
Software Mentions: 1
Published: over 3 years ago

10.3389/fpls.2019.00186

Quantification and Localization of Formylated Phloroglucinol Compounds (FPCs) in Eucalyptus Species
Cited by: 14
Author(s): Bruna Marques dos Santos, Juliane F. S. Zibrandtsen, Disan Gunbilig, Mette Sørensen, Federico Cozzi, Berin A. Boughton, Allison M. Heskes, Elizabeth Heather Jakobsen Neilson
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2020.508658

UPLC-HRMS Analysis Revealed the Differential Accumulation of Antioxidant and Anti-Aging Lignans and Neolignans in In Vitro Cultures of Linum usitatissimum L
Cited by: 8
Author(s): Shankhamala Bose, Thibaut Munsch, Arnaud Lanoue, Laurine Garros, Duangjai Tungmunnithum, Souhila Messaili, Émilie Destandau, Kévin Billet, Benoit St-Pierre, Marc Clastre, Bilal Haider Abbasi, Christophe Hano, Nathalie Giglioli-Guivarc’h
Software Mentions: 1
Published: about 4 years ago

10.3389/fpls.2021.634023

Inactivation of N-Acetylglucosaminyltransferase I and α1,3-Fucosyltransferase Genes in Nicotiana tabacum BY-2 Cells Results in Glycoproteins With Highly Homogeneous, High-Mannose N-Glycans
Cited by: 6
Author(s): Xavier Herman, Johann Far, Adeline Courtoy, Laurent Bouhon, Loïc Quinton, Edwin De Pauw, François Chaumont, Catherine Navarre
Software Mentions: 1
Published: almost 4 years ago

10.3389/fpls.2021.721614

Arbuscular Mycorrhizal Symbiosis Triggers Major Changes in Primary Metabolism Together With Modification of Defense Responses and Signaling in Both Roots and Leaves of Vitis vinifera
Cited by: 25
Author(s): Mary‐Lorène Goddard, Lorène Belval, Isabelle R. Martin, Lucie Roth, Hélène Laloue, Laurence Deglène-Benbrahim, Laure Valat, Christophe Bertsch, Julie Chong
Software Mentions: 1
Published: about 3 years ago

10.3390/ijms19072132

Identification of Two Auxin-Regulated Potassium Transporters Involved in Seed Maturation
Cited by: 20
Author(s): Rubén Tenorio-Berrío, Marta‐Marina Pérez‐Alonso, Jesús Vicente‐Carbajosa, Leticia Martín-Torres, Ingo Drèyer, Stephan Pollmann
Software Mentions: 1
Published: over 6 years ago

10.3390/antiox8080324

Relationships Between Chemical Structure and Antioxidant Activity of Isolated Phytocompounds from Lemon Verbena
Cited by: 37
Author(s): Noelia Sánchez‐Marzo, Jesús Lozano-Sánchez, María de la Luz Cádiz-Gurrea, María Herranz-López, Vicente Micol, Antonio Segura‐Carretero
Software Mentions: 1
Published: over 5 years ago

10.3389/fpls.2014.00554

Sustained mitogen-activated protein kinase activation reprograms defense metabolism and phosphoprotein profile in Arabidopsis thaliana
Cited by: 49
Author(s): Ines Lassowskat, Christoph Böttcher, Lennart Eschen‐Lippold, Dierk Scheel, Justin Lee
Software Mentions: 1
Published: about 10 years ago

10.3389/fpls.2015.01127

Boosting Sensitivity in Liquid Chromatography–Fourier Transform Ion Cyclotron Resonance–Tandem Mass Spectrometry for Product Ion Analysis of Monoterpene Indole Alkaloids
Cited by: 8
Author(s): Ryo Nakabayashi, Hiroshi Tsugawa, Mariko Kitajima, Hiromitsu Takayama, Kazuki Saito
Software Mentions: 1
Published: almost 9 years ago

10.3390/antiox9050373

Phytochemical Profile and Biological Activities of Tendrils and Leaves Extracts from a Variety of Vitis vinifera L.
Cited by: 21
Author(s): Mirela Moldovan, Rahela Carpa, Ionel Fizeșan, Laurian Vlase, Cătălina Bogdan, Sonia Iurian, Daniela Benedec, Anca Pop
Software Mentions: 1
Published: over 4 years ago

10.3390/genes11121422

Proteomic and Transcriptomic Analysis Identify Spliceosome as a Significant Component of the Molecular Machinery in the Pituitary Tumors Derived from POU1F1- and NR5A1-Cell Lineages
Cited by: 4
Author(s): Keiko Taniguchi‐Ponciano, Eduardo Peña-Martínez, Gloria Silva-Román, Sandra Vela-Patiño, Ana Laura Guzmán-Ortiz, Héctor Quezada, Erick Gómez‐Apo, Laura Chávez-Macías, Sophia Mercado-Medrez, Guadalupe Vargas‐Ortega, Ana Laura Espinosa-de-los-Monteros, Baldomero Gonzales-Virla, Aldo Ferreira‐Hermosillo, Etual Espinosa-Cárdenas, Claudia Ramírez‐Rentería, Ernesto Sosa, Blas López-Félix, Gerardo Guinto, Daniel Marrero‐Rodríguez, Moisés Mercado
Software Mentions: 1
Published: almost 4 years ago

10.1128/genomeA.00769-13

Complete Genome Sequence of Vibrio anguillarum M3, a Serotype O1 Strain Isolated from Japanese Flounder in China
Cited by: 13
Author(s): Guiyang Li, Zhaolan Mo, Jie Li, Xiao Peng, Bin Hao
Software Mentions: 1
Published: about 11 years ago

10.1016/j.heliyon.2019.e02002

Simple 3D printed stainless steel microreactors for online mass spectrometric analysis
Cited by: 10
Author(s): Gianmario Scotti, Sofia M. E. Nilsson, Ville-Pekka Matilainen, Markus Haapala, Gustav Boije af Gennäs, Jari Yli‐Kauhaluoma, Antti Salminen, Tapio Kotiaho
Software Mentions: 1
Published: over 5 years ago

10.3390/ijms20102528

Core-Fucosylated Tetra-Antennary N-Glycan Containing A Single N-Acetyllactosamine Branch Is Associated with Poor Survival Outcome in Breast Cancer
Cited by: 29
Author(s): Harmin Herrera, Tinslee Dilday, Allison Uber, Danielle A. Scott, Joelle N. Zambrano, Mengjun Wang, Peggi Angel, Anand Mehta, Richard Drake, Elizabeth G. Hill, Elizabeth S. Yeh
Software Mentions: 1
Published: over 5 years ago

10.3390/antiox10071101

Correlations between Total Antioxidant Capacity, Polyphenol and Fatty Acid Content of Native Grape Seed and Pomace of Four Different Grape Varieties in Hungary
Cited by: 14
Author(s): Éva Szabó, Tamás Marosvölgyi, Gabor T. Szilagyi, László Kőrösi, J. Schmidt, Kristóf Csepregi, László Márk, Ágnes Bóna
Software Mentions: 1
Published: over 3 years ago

10.5935/1518-0557.20190008

Serum metabolites as predictive molecular markers of ovarian response to controlled stimulation: a pilot study
Cited by: 1
Author(s): Edson Borges, Montani Da, Setti As, Zanetti Bf, Rcs Figueira, Assumpto Iaconelli, Diogo Oliveira‐Silva, D.P. Braga
Software Mentions: 1
Published: almost 6 years ago

10.1007/s13361-017-1768-y

Visualization of<sup>57</sup>Fe-Labeled Heme Isotopic Fine Structure and Localization of Regions of Erythroblast Maturation in Mouse Spleen by MALDI FTICR-MS Imaging
Cited by: 6
Author(s): Makoto Kihara, Yukari Matsuo-Tezuka, Mariko Noguchi-Sasaki, Keigo Yorozu, Mitsue Kurasawa, Yasushi Shimonaka, Michinori Hirata
Software Mentions: 1
Published: over 7 years ago

10.1007/s13361-015-1308-6

The Art of Destruction: Optimizing Collision Energies in Quadrupole-Time of Flight (Q-TOF) Instruments for Glycopeptide-Based Glycoproteomics
Cited by: 101
Author(s): Hannes Hinneburg, Kathrin Stavenhagen, U. Schweiger-Hufnagel, Stuart Pengelley, Wolfgang Jabs, Peter H. Seeberger, Daniel Varón Silva, Manfred Wuhrer, Daniel Kolarich
Software Mentions: 1
Published: almost 9 years ago

10.1007/s13361-019-02201-x

Top or Middle? Up or Down? Toward a Standard Lexicon for Protein Top-Down and Allied Mass Spectrometry Approaches
Cited by: 84
Author(s): Frederik Lermyte, Yury O. Tsybin, Peter B. O’Connor, Joseph A. Loo
Software Mentions: 1
Published: over 5 years ago

10.1007/s13361-019-02308-1

Phase relationships in two-dimensional mass spectrometry
Cited by: 8
Author(s): Maria A. van Agthoven, David P. A. Kilgour, Alice M. Lynch, Mark P. Barrow, Tomos E. Morgan, Christopher A. Wootton, Lionel Chiron, Marc-André Delsuc, Peter B. O’Connor
Software Mentions: 1
Published: about 5 years ago

10.1155/2015/490627

Systematic HPLC/ESI-High Resolution-qTOF-MS Methodology for Metabolomic Studies in Nonfluorescent Chlorophyll Catabolites Pathway
Cited by: 23
Author(s): José Julián Ríos, María Roca, Antonio Pérez‐Gálvez
Software Mentions: 1
Published: almost 10 years ago

10.1155/2017/3568621

Changes of Metabolomic Profile in<i> Helianthus annuus</i> under Exposure to Chromium(VI) Studied by capHPLC-ESI-QTOF-MS and MS/MS
Cited by: 10
Author(s): Alan Alexander González Ibarra, Katarzyna Wróbel, Eunice Yáñez Barrientos, Alma Rosa Corrales Escobosa, J. Felix Gutíerrez Corona, Israel Enciso Donis
Software Mentions: 1
Published: almost 8 years ago

10.1038/s41429-020-0296-3

Exploring metabolic adaptation of Streptococcus pneumoniae to antibiotics
Cited by: 5
Author(s): Anne Leonard, Kevin Möhlis, Rabea Schlüter, Edward J. Taylor, Michael Lalk, Karen Methling
Software Mentions: 1
Published: over 4 years ago

10.1074/jbc.M114.590638

Functional Analysis of Dishevelled-3 Phosphorylation Identifies Distinct Mechanisms Driven by Casein Kinase 1ϵ and Frizzled5
Cited by: 50
Author(s): Ondřej Bernatík, Kateřina Šedová, Carolin Schille, Ranjani Sri Ganji, Igor Červenka, Lukáš Trantı́rek, Alexandra Schambony, Zbyněk Zdráhal, Vı́tězslav Bryja
Software Mentions: 1
Published: over 10 years ago

10.1074/jbc.RA120.012566

Phosphoglycerol-type wall and lipoteichoic acids are enantiomeric polymers differentiated by the stereospecific glycerophosphodiesterase GlpQ
Cited by: 14
Author(s): Axel Walter, Sandra Unsleber, Jeanine Rismondo, Ana Jorge, Andreas Peschel, Angelika Gründling, Christoph Mayer
Software Mentions: 1
Published: over 4 years ago

10.1074/jbc.RA120.012655

Caspr2 interacts with type 1 inositol 1,4,5-trisphosphate receptor in the developing cerebellum and regulates Purkinje cell morphology
Cited by: 3
Author(s): Liam Argent, Friederike Winter, Imogen Prickett, Maria Carrasquero-Ordaz, Abby L. Olsen, Holger Kramer, Eric Lancaster, Esther B. E. Becker
Software Mentions: 1
Published: about 4 years ago

10.1074/jbc.RA120.015293

Linker residues regulate the activity and stability of hexokinase 2, a promising anticancer target
Cited by: 3
Author(s): Juliana C. Ferreira, Abdul-Rahman Khrbtli, Cameron Lee Shetler, Samman Mansoor, Liaqat Ali, Özge Şensoy, Wael M. Rabeh
Software Mentions: 1
Published: almost 4 years ago

10.1016/j.jbc.2021.100833

Almost half of the RTX domain is dispensable for complement receptor 3 binding and cell-invasive activity of the Bordetella adenylate cyclase toxin
Cited by: 6
Author(s): Carlos Espinosa-Viñals, Jiří Mašín, Peter Šebo, Ondřej Staněk, David Jurnečka, Radim Osička, Peter Šebo, Ladislav Bumba
Software Mentions: 1
Published: over 3 years ago

10.1111/jcmm.12607

Endothelial microparticles reduce <scp>ICAM</scp>‐1 expression in a micro<scp>RNA</scp>‐222‐dependent mechanism
Cited by: 98
Author(s): Felix Jansen, Xiaoyan Yang, Katharina Baumann, David Przybilla, Theresa Schmitz, Anna Flender, Kathrin Paul, Adil Hassan Alhusseiny, Georg Nickenig, Nikos Werner
Software Mentions: 1
Published: over 9 years ago

10.3390/antiox9020115

Molecular Characterization of White Wines Antioxidant Metabolome by Ultra High Performance Liquid Chromatography High-Resolution Mass Spectrometry
Cited by: 12
Author(s): Rémy Romanet, Florian Bahut, Maria Nikolantonaki, Régis D. Gougeon
Software Mentions: 1
Published: almost 5 years ago

10.3390/jcm7120483

Urinary Proteomics for the Early Diagnosis of Diabetic Nephropathy in Taiwanese Patients
Cited by: 26
Author(s): Wen‐Ling Liao, Chiz‐Tzung Chang, Ching‐Chu Chen, Wen‐Jane Lee, Shih‐Yi Lin, Hsin-Yi Liao, Chia-Ming Wu, Ya‐Wen Chang, Chao‐Jung Chen, Fuu‐Jen Tsai
Software Mentions: 1
Published: almost 6 years ago

10.3390/jcm9082494

Docosahexaenoic Acid Reverted the All-trans Retinoic Acid-Induced Cellular Proliferation of T24 Bladder Cancer Cell Line
Cited by: 4
Author(s): Lara Costantini, Romina Molinari, Barbara Farinon, Veronica Lelli, Anna Maria Timperio, Nicolò Merendino
Software Mentions: 1
Published: over 4 years ago

10.1093/jxb/ert328

Proteomic and phosphoproteomic analysis of polyethylene glycol-induced osmotic stress in root tips of common bean (Phaseolus vulgaris L.)
Cited by: 38
Author(s): Zhong‐Bao Yang, Dejene Eticha, Hendrik Führs, Dimitri Heintz, Daniel Ayoub, Alain Van Dorsselaer, Barbara Schlingmann, Idupulapati M. Rao, Hans‐Peter Braun, Walter J. Horst
Software Mentions: 1
Published: about 11 years ago

10.1093/jxb/eru331

Arabidopsis ENHANCED DISEASE SUSCEPTIBILITY1 promotes systemic acquired resistance via azelaic acid and its precursor 9-oxo nonanoic acid
Cited by: 50
Author(s): Finni Wittek, Thomas Hoffmann, Basem Kanawati, Marlies Bichlmeier, Claudia Knappe, Marion Wenig, Philippe Schmitt‐Kopplin, Jane E. Parker, Wilfried Schwab, A. Corina Vlot
Software Mentions: 1
Published: over 10 years ago

10.1093/jxb/ery463

Mutations in the Arabidopsis ROL17/isopropylmalate synthase 1 locus alter amino acid content, modify the TOR network, and suppress the root hair cell development mutant lrx1
Cited by: 31
Author(s): Myriam Schaufelberger, Florian Galbier, Aline Herger, Rita de Brito Francisco, Stefan Roffler, Gilles Clément, Anouck Diet, Stefan Hörtensteiner, Thomas Wicker, Christoph Ringli
Software Mentions: 1
Published: almost 6 years ago

10.1093/jxb/eraa159

Jasmonate-independent regulation of digestive enzyme activity in the carnivorous butterwort Pinguicula × Tina
Cited by: 11
Author(s): Ondřej Kocáb, Jana Jakšová, Ondřej Novák, Ivan Petřík, René Lenobel, Ivo Chamrád, Andrej Pavlovič
Software Mentions: 1
Published: over 4 years ago

10.1093/jxb/eraa485

Endogenous indole-3-acetamide levels contribute to the crosstalk between auxin and abscisic acid, and trigger plant stress responses in Arabidopsis
Cited by: 27
Author(s): Marta‐Marina Pérez‐Alonso, Paloma Ortiz‐García, José Moya-Cuevas, Thomas Lehmann, Beatriz Sánchez-Parra, Robert G. Björk, Sazzad Karim, Mohammad Reza Amirjani, Henrik Aronsson, Mark D. Wilkinson, Stephan Pollmann
Software Mentions: 1
Published: about 4 years ago

10.3390/ani9050222

Species-Specific Discrimination of Insect Meals for Aquafeeds by Direct Comparison of Tandem Mass Spectra
Cited by: 35
Author(s): Ikram Belghit, Erik-Jan Lock, Olivier Fumière, Marie-Caroline Lecrenier, Patricia Renard, Marc Dieu, Marc H.G. Berntssen, Magnus Palmblad, Josef Daniel Rasinger
Software Mentions: 1
Published: over 5 years ago

10.1371/journal.ppat.1002624

Group A Streptococcus Secreted Esterase Hydrolyzes Platelet-Activating Factor to Impede Neutrophil Recruitment and Facilitate Innate Immune Evasion
Cited by: 42
Author(s): Liu Mengyao, Hui Zhu, Jinquan Li, Cristiana C. Garcia, Wenchao Feng, Liliya N. Kirpotina, Jonathan K. Hilmer, Luciana P. Tavares, Arthur W. Layton, Mark T. Quinn, Brian Bothner, Mauro Martins Teixeira, Benfang Lei
Software Mentions: 1
Published: over 12 years ago

10.3390/ijms20194774

Use of Modified Clostridium perfringens Enterotoxin Fragments for Claudin Targeting in Liver and Skin Cells
Cited by: 7
Author(s): Laura‐Sophie Beier, Jan Rossa, Stephen D. Woodhouse, Sophia Bergmann, Holger Kramer, Jonas Protze, Miriam Eichner, Anna Piontek, Sabine Vidal-y-Sy, Johanna M. Brandner, Gerd Krause, Nicole Zitzmann, Jörg Piontek
Software Mentions: 1
Published: about 5 years ago

10.1371/journal.ppat.1002953

The Pseudomonas aeruginosa N-Acylhomoserine Lactone Quorum Sensing Molecules Target IQGAP1 and Modulate Epithelial Cell Migration
Cited by: 77
Author(s): Thommie Karlsson, Maria V. Turkina, Olena Yakymenko, Karl–Eric Magnusson, Elena Vikström
Software Mentions: 1
Published: about 12 years ago

10.3390/ijms20235957

n-Butylamine for Improving the Efficiency of Untargeted Mass Spectrometry Analysis of Plasma Metabolite Composition
Cited by: 5
Author(s): Dmitry L. Maslov, Oxana P. Trifonova, Elena E. Balashova, Petr G. Lokhov
Software Mentions: 1
Published: almost 5 years ago

10.1371/journal.ppat.1003553

Metabolic Features of Protochlamydia amoebophila Elementary Bodies – A Link between Activity and Infectivity in Chlamydiae
Cited by: 44
Author(s): Barbara S. Sixt, Alexander Siegl, Constanze Müller, Margarete Watzka, Wultsch Anna, Dimitrios Tziotis, Jacqueline Montanaro, Andreas Richter, Philippe Schmitt‐Kopplin, Matthias Horn
Software Mentions: 1
Published: over 11 years ago

10.1371/journal.ppat.1004196

An Invertebrate Warburg Effect: A Shrimp Virus Achieves Successful Replication by Altering the Host Metabolome via the PI3K-Akt-mTOR Pathway
Cited by: 125
Author(s): Su Mei-An, Yun‐Tzu Huang, I-Tung Chen, Der-Yen Lee, Hsieh Yun-Chieh, Li Chun-Yuan, Tze Hann Ng, Suh‐Yuen Liang, Shu‐Yu Lin, Shu‐Mei Huang, Yi-An Chiang, Hon‐Tsen Yu, Kay‐Hooi Khoo, Geen-Dong Chang, Chu Fang Lo, Han Ching Wang
Software Mentions: 1
Published: over 10 years ago

10.1371/journal.ppat.1008163

Regulation of macrophage activity by surface receptors contained within Borrelia burgdorferi-enriched phagosomal fractions
Cited by: 15
Author(s): Ana Carreras-González, Diego Barriales, Ainhoa Palacios, Marta Montesinos-Robledo, Nicolás Navasa, Mikel Azkargorta, Ainize Peña‐Cearra, Julen Tomás-Cortázar, Iraide Escobés, Miguel Ángel Pascual-Itoiz, Jana Hradiská, Jan Kopecký, David Gil, Rafael Prados-Rosales, Leticia Abecia, Estíbaliz Atondo, I. Serna Martin, Aize Pellón, Félix Elortza, Héctor Rodríguez, Juan Anguíta
Software Mentions: 1
Published: about 5 years ago

10.18632/oncotarget.23309

Significance of intratissue estrogen concentration coupled with estrogen receptors levels in colorectal cancer prognosis
Cited by: 11
Author(s): Agnieszka Anna Rawłuszko-Wieczorek, Łukasz Marczak, Nikodem Horst, Karolina Horbacka, Piotr Krokowicz, Paweł P. Jagodzińśki
Software Mentions: 1
Published: almost 7 years ago

10.3390/ijms21020568

Mass Spectrometry-Based Metabolomics Analysis of Obese Patients’ Blood Plasma
Cited by: 23
Author(s): Petr G. Lokhov, Elena E. Balashova, Oxana P. Trifonova, Dmitry L. Maslov, Elena Ponomarenko, Alexander I. Archakov
Software Mentions: 1
Published: almost 5 years ago

10.1186/1477-5956-8-10

Proteome characterization of cassava (Manihot esculenta Crantz) somatic embryos, plantlets and tuberous roots
Cited by: 51
Author(s): Kaimian Li, Wei Zhu, Kang Zeng, Zhenwen Zhang, Jianqiu Ye, Wenjun Ou, Samrina Rehman, Bruria Heuer, Songbi Chen
Software Mentions: 1
Published: over 14 years ago

10.3390/ijms21197206

Self-Assembly of Supramolecular Architectures by the Effect of Amino Acid Residues of Quaternary Ammonium Pillar[5]arenes
Cited by: 14
Author(s): A. A. Nazarova, D. N. Shurpik, Pavel L. Padnya, Timur A. Mukhametzyanov, Peter J. Cragg, Ivan I. Stoikov
Software Mentions: 1
Published: about 4 years ago

10.1186/1477-5956-9-63

Identification of stromal proteins overexpressed in nodular sclerosis Hodgkin lymphoma
Cited by: 6
Author(s): Philippe Kischel, David Waltregny, Yannick Greffe, Gabriel Mazzucchelli, Edwin De Pauw, Laurence de Leval, Vincenzo Castronovo
Software Mentions: 1
Published: about 13 years ago

10.1186/1477-5956-10-31

Plasma protein alterations in the refractory anemia with excess blasts subtype 1 subgroup of myelodysplastic syndrome
Cited by: 12
Author(s): Pavel Májek, Zuzana Reicheltová, Jiřı́ Suttnar, Jaroslav Čermák, Jan E. Dyr
Software Mentions: 1
Published: almost 13 years ago

10.1186/1477-5956-10-62

Phosphoproteomic analysis reveals major default phosphorylation sites outside long intrinsically disordered regions of Arabidopsis plasma membrane proteins
Cited by: 7
Author(s): Claude Nespoulous, Valérie Rofidal, Nicolas Sommerer, Sonia Hem, Michel Rossignol
Software Mentions: 1
Published: almost 13 years ago

10.1186/1477-5956-11-4

Comparative proteomic analysis implicates eEF2 as a novel target of PI3Kγ in the MDA-MB-231 metastatic breast cancer cell line
Cited by: 6
Author(s): Meizhi Niu, Manuela Klingler‐Hoffmann, Julie Brazzatti, Briony E. Forbes, Chareeporn Akekawatchai, Peter Hoffmann, Shaun R. McColl
Software Mentions: 1
Published: almost 12 years ago

10.1186/1477-5956-11-3

Major soluble proteome changes in Deinococcus deserti over the earliest stages following gamma-ray irradiation
Cited by: 11
Author(s): Alain Dedieu, Elodie Sahinovic, Philippe Guérin, Laurence Blanchard, Sylvain Fochesato, Bruno Meunier, Arjan de Groot, Jean Armengaud
Software Mentions: 1
Published: almost 12 years ago

10.1186/1477-5956-11-14

Plasma proteome changes associated with refractory anemia and refractory anemia with ringed sideroblasts in patients with myelodysplastic syndrome
Cited by: 13
Author(s): Pavel Májek, Zuzana Riedelová-Reicheltová, Jiřı́ Suttnar, Klára Pečánková, Jaroslav Čermák, Jan E. Dyr
Software Mentions: 1
Published: almost 12 years ago

10.1002/pmic.201100669

Synaptic proteome changes in mouse brain regions upon auditory discrimination learning
Cited by: 14
Author(s): Thilo Kähne, Angela Kolodziej, Karl‐Heinz Smalla, Elke Eisenschmidt, Utz-Uwe Haus, Robert Weismantel, Siegfried Kropf, Wolfram Wetzel, Frank W. Ohl, Wolfgang Tischmeyer, Michael Naumann, Eckart D. Gundelfinger
Software Mentions: 1
Published: over 12 years ago

10.1039/d0cb00220h

Intermediary conformations linked to the directionality of the aminoacylation pathway of nonribosomal peptide synthetases
Cited by: 11
Author(s): Florian Mayerthaler, Anna‐Lena Feldberg, Jonas Alfermann, Xiyan Sun, Wieland Steinchen, Han‐Kwang Yang, Henning D. Mootz
Software Mentions: 1
Published: almost 4 years ago

10.3390/ijms21218294

Anti-Influenza Activity of the Ribonuclease Binase: Cellular Targets Detected by Quantitative Proteomics
Cited by: 6
Author(s): Vera Ulyanova, Rashed Mahmud, Alexander Laikov, Elena Dudkina, Maria Markelova, Ahmed Mostafa, Stephan Pleschka, О. N. Ilinskaya
Software Mentions: 1
Published: about 4 years ago

10.1016/j.redox.2021.102112

Structural basis of the pleiotropic and specific phenotypic consequences of missense mutations in the multifunctional NAD(P)H:quinone oxidoreductase 1 and their pharmacological rescue
Cited by: 17
Author(s): Juan Luis Pacheco-García, Ernesto Anoz-Carbonell, Pavla Vaňková, Adithi Kannan, Rogelio Palomino-Morales, Noel Mesa‐Torres, Eduardo Salido, Petr Man, Milagros Medina, Athi N. Naganathan, Ángel L. Pey
Software Mentions: 1
Published: about 3 years ago

10.1186/s12931-017-0538-5

Determining the presence of asthma-related molecules and salivary contamination in exhaled breath condensate
Cited by: 19
Author(s): Charmion Cruickshank‐Quinn, Michael Armstrong, Roger Powell, Joe Gomez, Marc R. Elie, Nichole Reisdorph
Software Mentions: 1
Published: over 7 years ago

10.1186/s12977-021-00560-6

Characterisation of a highly potent and near pan-neutralising anti-HIV monoclonal antibody expressed in tobacco plants
Cited by: 6
Author(s): Catherine Moore, Melanie Grandits, Clemens Grünwald‐Gruber, Friedrich Altmann, Maria Kotouckova, Audrey Y‐H. Teh, Julian K.‐C.
Software Mentions: 1
Published: over 3 years ago

10.1038/srep02805

In situ label-free imaging for visualizing the biotransformation of a bioactive polyphenol
Cited by: 30
Author(s): Yoon Hee Kim, Yoshinori Fujimura, Takatoki Hagihara, Masako Sasaki, Daichi Yukihira, Tatsuhiko Nagao, Daisuke Miura, S. Yamaguchi, Kazunori Saito, Hiroshi Tanaka, Hiroyuki Wariishi, Koji Yamada, Hirofumi Tachibana
Software Mentions: 1
Published: about 11 years ago

10.1038/srep09736

Interfacing low-energy SAW nebulization with Liquid Chromatography-Mass Spectrometry for the analysis of biological samples
Cited by: 21
Author(s): Karina Tveen-Jensen, Frank Gesellchen, Rab Wilson, Corinne M. Spickett, Jonathan M. Cooper, Andrew R. Pitt
Software Mentions: 1
Published: over 9 years ago

10.1038/srep10246

Cloning and characterization of farnesyl pyrophosphate synthase from the highly branched isoprenoid producing diatom Rhizosolenia setigera
Cited by: 14
Author(s): Victor Marco Emmanuel N. Ferriols, Ryoko Yaginuma, Masao Adachi, Kentaro Takada, Shigeki Matsunaga, Shigeru Okada
Software Mentions: 1
Published: over 9 years ago

10.3390/ijms21228789

Sphingomyelin Deacylase, the Enzyme Involved in the Pathogenesis of Atopic Dermatitis, Is Identical to the β-Subunit of Acid Ceramidase
Cited by: 5
Author(s): Yasuhiro Teranishi, Hiroshi Kuwahara, Masaru Ueda, Tadashi Takemura, Masanori Kusumoto, Keiji Nakamura, Jun Sakai, Tōru Kimura, Yasuji Furutani, Makoto Kawashima, Genji Imokawa, Mari Nogami-Itoh
Software Mentions: 1
Published: about 4 years ago

10.3390/ijms22020864

Mass Spectral Filtering by Mass-Remainder Analysis (MARA) at High Resolution and Its Application to Metabolite Profiling of Flavonoids
Cited by: 4
Author(s): Tibor Nagy, Georg Roth, Ákos Kuki, Miklós Zsuga, Sándor Kéki
Software Mentions: 1
Published: almost 4 years ago

10.1098/rsob.140125

Hsp10 nuclear localization and changes in lung cells response to cigarette smoke suggest novel roles for this chaperonin
Cited by: 14
Author(s): Simona Corrao, Rita Anzalone, Melania Lo Iacono, Tiziana Corsello, Antonino Di Stefano, Silvestro Ennio D’Anna, Bruno Balbi, Mauro Carone, Anna Sala, Davide Corona, Anna Maria Timperio, Lello Zolla, Felicia Farina, Everly Conway de Macario, Alberto J. L. Macario, Francesco Cappello, Giampiero La Rocca
Software Mentions: 1
Published: about 10 years ago

10.1107/S2059798316012237

Crystal structure of human interferon-γ receptor 2 reveals the structural basis for receptor specificity
Cited by: 12
Author(s): Pavel Mikulecký, Jiří Zahradník, Petr Kolenko, Jiří Černý, Tatsiana Charnavets, Lucie Kolářová, Iva Nečasová, Phuong Ngoc Pham, Bohdan Schneider
Software Mentions: 1
Published: over 8 years ago

10.1038/srep25919

In vivo Real-Time Mass Spectrometry for Guided Surgery Application
Cited by: 90
Author(s): Benoit Fatou, Philippe Saudemont, Éric Leblanc, D. Vinatier, Violette Mesdag, Maxence Wisztorski, Cristian Focşa, Michel Salzet, Michaël Ziskind, Isabelle Fournier
Software Mentions: 1
Published: over 8 years ago

10.1038/srep27732

Six Hours after Infection, the Metabolic Changes Induced by WSSV Neutralize the Host’s Oxidative Stress Defenses
Cited by: 34
Author(s): I-Tung Chen, Der-Yen Lee, Yun‐Tzu Huang, Guang Hsiung Kou, Han Ching Wang, Geen-Dong Chang, Chu Fang Lo
Software Mentions: 1
Published: over 8 years ago

10.1038/srep27955

Longitudinal monitoring of immunoglobulin A glycosylation during pregnancy by simultaneous MALDI-FTICR-MS analysis of N- and O-glycopeptides
Cited by: 32
Author(s): Albert Bondt, Simone Nicolardi, Bas C. Jansen, Kathrin Stavenhagen, Dennis Blank, Guinevere S. M. Kammeijer, Radoslaw P. Kozak, Daryl L. Fernandes, Paul J. Hensbergen, Johanna M. W. Hazes, Yuri E. M. van der Burgt, Radboud J E M Dolhain, Manfred Wuhrer
Software Mentions: 1
Published: over 8 years ago

10.1038/srep28207

IgG1 Fc N-glycan galactosylation as a biomarker for immune activation
Cited by: 68
Author(s): Sanne E. de Jong, Maurice H. J. Selman, Ayôla Akim Adegnika, Abena S. Amoah, Elly van Riet, Yvonne C. M. Kruize, John G. Raynes, Alejandro Rodríguez, Daniel Boakye, Erika von Mutius, André C. Knulst, Jon Genuneit, Philip J. Cooper, Cornelis H. Hokke, Manfred Wuhrer, Maria Yazdanbakhsh
Software Mentions: 1
Published: over 8 years ago

10.3390/ani11082319

In Vitro Antibacterial Effect of the Methanolic Extract of the Korean Soybean Fermented Product Doenjang against Staphylococcus aureus
Cited by: 5
Author(s): Klára Laloučková, Lucie Malá, Petr Maršík, E. Skřivanová
Software Mentions: 1
Published: over 3 years ago

10.1007/s00216-013-7582-x

Aggressive dereplication using UHPLC–DAD–QTOF: screening extracts for up to 3000 fungal secondary metabolites
Cited by: 120
Author(s): Andreas Klitgaard, Anne Iversen, Mikael Rørdam Andersen, Thomas Ostenfeld Larsen, Jens Christian Frisvad, Kristian Fog Nielsen
Software Mentions: 1
Published: almost 11 years ago

10.1038/srep37737

Glyoxalase 1-knockdown in human aortic endothelial cells – effect on the proteome and endothelial function estimates
Cited by: 34
Author(s): Bernd Stratmann, Britta Engelbrecht, Britta C. Espelage, Nadine Klusmeier, Janina Tiemann, Thomas Gawlowski, Yvonne Mattern, Martin Eisenacher, Helmut E. Meyer, Naila Rabbani, Paul J. Thornalley, Diethelm Tschöepe, Gereon Poschmann, Kai Stühler
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep40664

WHSC1L1-mediated EGFR mono-methylation enhances the cytoplasmic and nuclear oncogenic activity of EGFR in head and neck cancer
Cited by: 32
Author(s): Vassiliki Saloura, Theodore Vougiouklakis, Makda Zewde, Xiaolan Deng, Kazuma Kiyotani, Jae-Hyun Park, Yo Matsuo, Mark W. Lingen, Takehiro Suzuki, Naoshi Dohmae, Ryuji Hamamoto
Software Mentions: 1
Published: almost 8 years ago

10.1038/srep41437

Aqueous extract of Polygonum bistorta modulates proteostasis by ROS-induced ER stress in human hepatoma cells
Cited by: 15
Author(s): Yu-Huei Liu, Yui-Ping Weng, Lin H, Sai-Wen Tang, Chao‐Jung Chen, Chi-Jung Liang, Ku Chung-Yu, Jung‐Yaw Lin
Software Mentions: 1
Published: almost 8 years ago

Projects: pypi: DataAnalysis

Papers Mentioning DataAnalysis 493