cran: treemap | Projects | Ecosyste.ms: Papers

10.1038/s41598-020-80365-3

Drivers of spatio-temporal variation in mosquito submissions to the citizen science project ‘Mückenatlas’
Cited by: 13
Author(s): Nadja Pernat, Helge Kampen, Florian Ruland, Jonathan M. Jeschke, Doreen Werner
Software Mentions: 14
Published: almost 4 years ago

10.1038/s42003-021-01842-7

Cell-autonomous immune gene expression is repressed in pulmonary neuroendocrine cells and small cell lung cancer
Cited by: 35
Author(s): Ling Cai, Hongyu Liu, Fang Huang, Junya Fujimoto, Luc Girard, Jun Chen, Yongwen Li, Yu An Zhang, Dhruba Deb, Victor Stastny, Karine Pozo, Christin S. Kuo, Gaoxiang Jia, Chendong Yang, Wei Zou, Adeeb Alomar, Kenneth E. Huffman, Mahboubeh Papari-Zareei, Lin Yang, Benjamin J. Drapkin, Esra A. Akbay, David S. Shames, Ignacio I. Wistuba, Tao Wang, Jane E. Johnson, Guanghua Xiao, Ralph J. DeBerardinis, John D. Minna, Yang Xie, Adi F. Gazdar
Software Mentions: 13
Published: over 3 years ago

10.1186/s12915-018-0518-3

Time-resolved transcriptome and proteome landscape of human regulatory T cell (Treg) differentiation reveals novel regulators of FOXP3
Cited by: 21
Author(s): Angelika Schmidt, Francesco Marabita, Narsis A. Kiani, Catharina C. Groß, Henrik J. Johansson, Szabolcs Éliás, Sini Rautio, Matilda Eriksson, Sunjay Jude Fernandes, Gilad Silberberg, Ubaid Ullah, Urvashi Bhatia, Harri Lähdesmäki, Janne Lehtiö, David Gomez-Cabrero, Heinz Wiendl, Riitta Lahesmaa, Jesper Tegnér
Software Mentions: 9
Published: over 6 years ago

10.1371/journal.ppat.1009602

Single cell analysis of host response to helminth infection reveals the clonal breadth, heterogeneity, and tissue-specific programming of the responding CD4+ T cell repertoire
Cited by: 5
Author(s): Ivy K. Brown, Nathan Dyjack, Mindy M. Miller, S. Harsha Krovi, Cydney Rios, Rachel A. Woolaver, Laura Harmacek, Ting-Hui Tu, Brian P. O’Connor, Thomas Danhorn, Brian Vestal, Laurent Gapin, Clemencia Pinilla, Max A. Seibold, James Scott‐Browne, Radleigh Santos, R. Lee Reinhardt
Software Mentions: 8
Published: over 3 years ago

10.1093/braincomms/fcab141

Amyotrophic lateral sclerosis transcriptomics reveals immunological effects of low-dose interleukin-2
Cited by: 11
Author(s): Ilaria Giovannelli, Nadhim Bayatti, A.G. Brown, Dennis Wang, Marius Mickunas, William Camu, Jean-Luc Veyrune, Christine Payan, Cecilia Garlanda, Massimo Locati, Raul Juntas-Moralès, Nicolas Pageot, Andrea Malaspina, Ulf Andréasson, Carey Suehs, Safa Saker, Christophe Masseguin, John de Vos, Henrik Zetterberg, Ammar Al‐Chalabi, P. Nigel Leigh, Timothy Tree, G. Bensimon, Paul R. Heath, Pamela J. Shaw, Janine Kirby
Software Mentions: 8
Published: almost 4 years ago

10.1038/s41598-017-05927-4

Gene expression reversal toward pre-adult levels in the aging human brain and age-related loss of cellular identity
Cited by: 35
Author(s): Handan Melike Dönertaş, Hamit İzgi, Altuğ Kamacıoğlu, Zhisong He, Philipp Khaitovich, Mehmet Somel
Software Mentions: 7
Published: over 7 years ago

10.3390/insects11080488

Arthropod Communities in Urban Agricultural Production Systems under Different Irrigation Sources in the Northern Region of Ghana
Cited by: 3
Author(s): Louis Amprako, Kathrin Stenchly, Martin Wiehle, G. Nyarko, Andreas Buerkert
Software Mentions: 6
Published: over 4 years ago

10.1074/jbc.RA120.014745

Quantitative phosphoproteomic analysis reveals involvement of PD-1 in multiple T cell functions
Cited by: 14
Author(s): Anna S. Tocheva, Michael Peled, Marianne Strazza, Kieran Adam, Shalom Lerrer, Shruti Nayak, Inbar Azoulay-Alfaguter, Connor Foster, Elliot A. Philips, Benjamin G. Neel, Beatrix Ueberheide, Adam Mor
Software Mentions: 6
Published: almost 4 years ago

10.1186/s12915-021-01010-7

Engineered sex ratio distortion by X-shredding in the global agricultural pest Ceratitis capitata
Cited by: 22
Author(s): Angela Meccariello, Flávia Krsticevic, Rita Colonna, Giuseppe Del Corsano, Barbara Fasulo, Philippos Aris Papathanos, Nikolai Windbichler
Software Mentions: 6
Published: over 3 years ago

10.3390/microorganisms8040567

Functional Genomics Differentiate Inherent and Environmentally Influenced Traits in Dinoflagellate and Diatom Communities
Cited by: 11
Author(s): Stephanie Elferink, Uwe John, Stefan Neuhaus, Sylke Wohlrab
Software Mentions: 6
Published: over 4 years ago

10.1186/s12889-020-09566-9

Prioritisation for future surveillance, prevention and control of 98 communicable diseases in Belgium: a 2018 multi-criteria decision analysis study
Cited by: 10
Author(s): Sofieke Klamer, Nina Van Goethem, Daniel Rhys Thomas, Els Duysburgh, Toon Braeye, Sophie Quoilin
Software Mentions: 6
Published: almost 4 years ago

10.1002/ece3.6422

Evidence of capacitation in the parasitoid wasp, Nasonia vitripennis, and its potential role in sex allocation
Cited by: 0
Author(s): Alun R. C. Jones, Eamonn B. Mallon
Software Mentions: 5
Published: over 4 years ago

10.1186/s12911-019-0750-y

A visual interactive analytic tool for filtering and summarizing large health data sets coded with hierarchical terminologies (VIADS)
Cited by: 8
Author(s): Xia Jing, Matthew Emerson, David Masters, Matthew L. Brooks, Jacob Buskirk, Nasseef Abukamail, Chang Liu, James J. Cimino, Jay H. Shubrook, Sonsoles de Lacalle, Yuchun Zhou, Vimla L. Patel
Software Mentions: 4
Published: almost 6 years ago

10.3390/genes11091066

Transcriptome Analysis Reveals a Gene Expression Pattern Associated with Fuzz Fiber Initiation Induced by High Temperature in Gossypium barbadense
Cited by: 6
Author(s): Gongmin Cheng, Longyan Zhang, Hengling Wei, Hantao Wang, Jianhua Lü, Shuxun Yu
Software Mentions: 4
Published: about 4 years ago

10.7150/thno.61390

The methods and advances of adaptive immune receptors repertoire sequencing
Cited by: 17
Author(s): Hongmei Li, Wenjing Pan, Cheng Tang, Yujie Tang, Haijing Wu, Akihiko Yoshimura, Yan Deng, Nongyue He, Li Song
Software Mentions: 4
Published: almost 4 years ago

10.2196/jmir.4415

Informing the Design of Direct-to-Consumer Interactive Personal Genomics Reports
Cited by: 20
Author(s): Orit Shaer, Oded Nov, Johanna Okerlund, Martina Balestra, Elizabeth Stowell, Laura Ascher, Joanna Bi, C. Schlenker, Mad Price Ball
Software Mentions: 3
Published: over 9 years ago

10.1186/s12864-015-1354-2

The central nervous system transcriptome of the weakly electric brown ghost knifefish (Apteronotus leptorhynchus): de novo assembly, annotation, and proteomics validation
Cited by: 20
Author(s): Joseph P. Salisbury, Ruxandra F. Sîrbulescu, Ben Moran, Jared R. Auclair, Günther K.H. Zupanc, Jeffrey N. Agar
Software Mentions: 3
Published: over 9 years ago

10.3897/BDJ.8.e57942

Bryophytes Occurrences Dataset Based On SYKO Herbarium Moss Collection
Cited by: 0
Author(s): Galina V. Zheleznova, Tatyana Shubina, М. В. Рубцов, Г. И. Литвиненко, И. Ф. Чадин
Software Mentions: 3
Published: about 4 years ago

10.1371/journal.pcbi.1003733

Analysis of the Protein Domain and Domain Architecture Content in Fungi and Its Application in the Search of New Antifungal Targets
Cited by: 23
Author(s): Alejandro Barrera, Ana Alastruey‐Izquierdo, Marı́a Jesús Martı́n, Isabel Cuesta, Juan Antonio Vizcaíno
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pone.0156425

Citizen Science and the Urban Ecology of Birds and Butterflies — A Systematic Review
Cited by: 29
Author(s): James Wang Wei, Benjamin P. Y.‐H. Lee, Low Bing Wen
Software Mentions: 3
Published: over 8 years ago

10.1128/mSphere.00476-20

Characterization of Extracellular Vesicles Produced by Aspergillus fumigatus Protoplasts
Cited by: 41
Author(s): Juliana Rizzo, Thibault Chaze, Kildare Miranda, Robert W. Roberson, Olivier Gorgette, Leonardo Nimrichter, Mariette Matondo, Jean Paul Latgé, Anne Beauvais, Márcio L. Rodrigues
Software Mentions: 3
Published: about 4 years ago

10.1186/1471-2105-11-469

MetNetGE: interactive views of biological networks and ontologies
Cited by: 8
Author(s): Mingxing Jia, Suh-Yeon Choi, Dirk Reiners, Eve Syrkin Wurtele, Julie A. Dickerson
Software Mentions: 3
Published: about 14 years ago

10.1371/journal.pone.0177883

Detecting early signs of heat and drought stress in Phoenix dactylifera (date palm)
Cited by: 39
Author(s): Omid Safronov, Juergen Kreuzwieser, Georg Haberer, Mohamed S Alyousif, Waltraud X. Schulze, Naif Khalaf Alharbi, Leila Arab, Peter Ache, Thomas Stempfl, Joerg Kruse, Klaus Mayer, Rainer Hedrich, Heinz Rennenberg, Jarkko Salojärvi, Jaakko Kangasjärvi
Software Mentions: 2
Published: over 7 years ago

10.3897/BDJ.8.e58033

Reptile occurrences data in the Volga River basin (Russia)
Cited by: 2
Author(s): А. Г. Бакиев, Alexander Kirillov, Nadezhda Yu. Kirillova, Alexander B. Ruchin, A. A. Klenina, R. A. Gorelov, Н. В. Костина
Software Mentions: 2
Published: about 4 years ago

10.3897/BDJ.7.e32307

Moss occurrences in Yugyd Va National Park, Subpolar and Northern Urals, European North-East Russia
Cited by: 3
Author(s): Galina V. Zheleznova, Tatyana Shubina, С. В. Дегтева, И. Ф. Чадин, М. В. Рубцов
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-017-01974-z

Large scale phosphoprotein profiling to explore Drosophila cold acclimation regulatory mechanisms
Cited by: 28
Author(s): Hervé Colinet, Charles Pineau, Emmanuelle Com
Software Mentions: 2
Published: over 7 years ago

10.3897/BDJ.9.e66470

Historical collections of vascular plants in the Korean Peninsula by three major collectors in the early 20th century: U. J. Faurie, E. J. Taquet and E. H. Wilson
Cited by: 0
Author(s): Chin‐Sung Chang, Shin Young Kwon, Hui Kim
Software Mentions: 2
Published: over 3 years ago

10.3897/BDJ.9.e68315

Occurrence of the insectivores and rodents in the Samarskaya Luka (European Russia)
Cited by: 1
Author(s): Nadezhda Yu. Kirillova, Alexander Kirillov, Victoria A. Vekhnik, A. A. Klenina
Software Mentions: 2
Published: over 3 years ago

10.1186/s12864-016-3251-8

From yeast to hypha: defining transcriptomic signatures of the morphological switch in the dimorphic fungal pathogen Ophiostoma novo-ulmi
Cited by: 22
Author(s): Martha Nigg, Louis Bernier
Software Mentions: 2
Published: about 8 years ago

10.3389/fmed.2021.626580

Identify the Characteristics of Metabolic Syndrome and Non-obese Phenotype: Data Visualization and a Machine Learning Approach
Cited by: 6
Author(s): Cheng Yu, Shy Shin Chang, Chang Hsien Lin, Yu Lin, Jenny L Wu, Ray Jade Chen
Software Mentions: 2
Published: over 3 years ago

10.3389/fimmu.2020.582010

Longitudinal Analysis of T and B Cell Receptor Repertoire Transcripts Reveal Dynamic Immune Response in COVID-19 Patients
Cited by: 54
Author(s): Xuefeng Niu, Song Li, Pingchao Li, Wenjing Pan, Qian Wang, Ying Feng, Xiaoneng Mo, Qihong Yan, Xianmiao Ye, Jia Luo, Linbing Qu, Daniel Weber, Miranda Byrne‐Steele, Zhe Wang, Fengjia Yu, Fang Li, R Myers, Michael T. Lotze, Nanshan Zhong, Jian Han, Ling Chen
Software Mentions: 2
Published: about 4 years ago

Ecosyste.ms: Papers

Projects: cran: treemap

Papers Mentioning treemap 31