Ecosyste.ms: Papers

10.3390/genes11020226

Integrative Analysis Identifies Candidate Tumor Microenvironment and Intracellular Signaling Pathways that Define Tumor Heterogeneity in NF1
Cited by: 10
Author(s): Jineta Banerjee, Robert J. Allaway, Jaclyn N. Taroni, Aaron Baker, Xiaochun Zhang, Chang In Moon, Christine A. Pratilas, Jaishri O. Blakeley, Justin Guinney, Angela C. Hirbe, Casey S. Greene
Software Mentions: 7
Published: over 4 years ago

10.3390/pathogens10050603

Altered Nasal Microbiota Composition Associated with Development of Polyserositis by Mycoplasma hyorhinis
Cited by: 9
Author(s): Miguel Blanco-Fuertes, Florencia Correa‐Fiz, Lorenzo Fraile, Marina Sibila, Virginia Aragón
Software Mentions: 7
Published: over 3 years ago

10.3389/fimmu.2021.634127

Immunophenotyping of Peripheral Blood Mononuclear Cells in Septic Shock Patients With High-Dimensional Flow Cytometry Analysis Reveals Two Subgroups With Differential Responses to Immunostimulant Drugs
Cited by: 4
Author(s): Ya Wang, Brian Gloss, Benjamin Tang, Suat Dervish, Brigitte Santner-Nanan, Christina Whitehead, Kristy Masters, Kristen K. Skarratt, Sally Teoh, Stephen D. Schibeci, Nicole Fewings, Chrystelle Brignone, Frédéric Triebel, David R. Booth, Anthony S. McLean, Marek Nalos
Software Mentions: 7
Published: over 3 years ago

10.1038/s41598-021-87368-8

Alteration of the gut fecal microbiome in children living with HIV on antiretroviral therapy in Yaounde, Cameroon
Cited by: 12
Author(s): William Baiye Abange, Casey Martin, Aubin Nanfack, Laeticia Grace Yatchou, Nichole M. Nusbacher, Clement Assob Nguedia, Hortense Gonsu Kamga, Joseph Fokam, Sean Kennedy, Alexis Ndjolo, Catherine Lozupone, Céline Nguefeu Nkenfou
Software Mentions: 7
Published: over 3 years ago

10.3389/fvets.2020.00345

Spatial Trends in Salmonella Infection in Pigs in Spain
Cited by: 10
Author(s): Kendy Tzu-Yun Teng, Marta Martínez Avilés, María Ugarte‐Ruiz, Carmen Bárcena, Ana de la Torre, Gemma Muñoz-Alonso López, Miguel A. Moreno, Lucas Domı́nguez, Julio Álvarez
Software Mentions: 7
Published: over 4 years ago

10.3389/fvets.2021.695948

Who's the Boss? Assessing Convergent Validity of Aggression Based Dominance Measures in Male Laboratory Mice, Mus Musculus
Cited by: 5
Author(s): Amanda J. Barabas, Jeffrey R. Lucas, Marisa A. Erasmus, Heng-Wei Cheng, Brianna N. Gaskill
Software Mentions: 7
Published: over 3 years ago

10.3389/fvets.2019.00374

The Effect of Abnormal Reproductive Tract Discharge on the Calving to Conception Interval of Dairy Cows
Cited by: 5
Author(s): Madeleine J. Hay, Allan Gunn, Ángel Abuelo, Victoria Brookes
Software Mentions: 7
Published: about 5 years ago

10.5811/westjem.2021.3.50116

Emergency Department-initiated High-flow Nasal Cannula for COVID-19 Respiratory Distress
Cited by: 7
Author(s): Zachary J. Jarou, David G. Beiser, Willard W. Sharp, Ravi Ravi Chacko, Deirdre Goode, Daniel Rubin, Dinesh J. Kurian, Allison Dalton, Stephen Estime, Michael O’Connor, Bhakti Patel, John P. Kress, Thomas Spiegel
Software Mentions: 7
Published: over 3 years ago

10.3389/fvets.2020.00214

Cultural “Blind Spots,” Social Influence and the Welfare of Working Donkeys in Brick Kilns in Northern India
Cited by: 16
Author(s): Tamlin Watson, Laura M Kubasiewicz, Natasha Chamberlain, Caroline Nye, Zoe Raw, Faith Burden
Software Mentions: 7
Published: over 4 years ago

10.1038/s41598-020-77578-x

Empty mesoporous silica particles significantly delay disease progression and extend survival in a mouse model of ALS
Cited by: 7
Author(s): Marcel F. Leyton-Jaimes, Patrik Ivert, Jan Hoeber, Yilin Han, Adam Feiler, Chunfang Zhou, Stanislava Pankratova, Varda Shoshan‐Barmatz, Adrian Israelson, Elena N. Kozlova
Software Mentions: 7
Published: almost 4 years ago

10.3390/v12010078

Antibody Responses against Enterovirus Proteases are Potential Markers for an Acute Infection
Cited by: 7
Author(s): Niila V. V. Saarinen, Virginia M. Stone, Minna M. Hankaniemi, Magdalena A. Mazur, Tytti Vuorinen, Malin Flodström‐Tullberg, Heikki Hyöty, Vesa P. Hytönen, Olli H. Laitinen
Software Mentions: 7
Published: almost 5 years ago

10.3390/nu12051288

Cluster Analysis of Physical Activity Patterns, and Relationship with Sedentary Behavior and Healthy Lifestyles in Prepubertal Children: Genobox Cohort
Cited by: 20
Author(s): Rosaura Leis, José Manuel Jurado-Castro, Francisco Jesús Llorente-Cantarero, Augusto Anguita‐Ruiz, Azahara Iris-Rupérez, Juan José Bedoya-Carpente, Rocío Vázquez-Cobela, Concepción M. Aguilera, Gloria Bueno, Mercedes Gil-Campos
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0257386

(DIGSS) Determination of Intervals using Georeferenced Survey Simulation: An R package for subsurface survey
Cited by: 0
Author(s): William J. Pestle, Cara Hubbell, Mark Hübbe
Software Mentions: 7
Published: about 3 years ago

10.1186/s13054-021-03503-x

Fluid proteomics of CSF and serum reveal important neuroinflammatory proteins in blood–brain barrier disruption and outcome prediction following severe traumatic brain injury: a prospective, observational study
Cited by: 26
Author(s): Caroline Lindblad, Elisa Pin, David R. Just, Faiez Al Nimer, Peter Nilsson, Bo‐Michael Bellander, Mikael Svensson, Fredrik Piehl, Eric Peter Thelin
Software Mentions: 7
Published: over 3 years ago

10.1136/bmj.m3339

Risk stratification of patients admitted to hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: development and validation of the 4C Mortality Score
Cited by: 699
Author(s): Stephen R Knight, Antonia Ho, Riinu Pius, Iain Buchan, Gail Carson, Thomas M Drake, Jake Dunning, Cameron J Fairfield, Carrol Gamble, Christopher Green, Gupta Rk, Sophie Halpin, Hayley Hardwick, Karl Holden, Peter Horby, Clare Jackson, Kenneth A McLean, Laura Merson, Jonathan S Nguyen‐Van‐Tam, Lisa Norman, Mahdad Noursadeghi, Piero Olliaro, Mark G Pritchard, Clark D Russell, Catherine Shaw, Aziz Sheikh, Tom Solomon, Cathie Sudlow, Olivia Swann, Lance Turtle, Peter Openshaw, J Kenneth Baillie, Malcolm G Semple, Annemarie B Docherty, Ewen M Harrison
Software Mentions: 7
Published: about 4 years ago

10.3389/fcimb.2021.733619

Antigen Presenting Cells Link the Female Genital Tract Microbiome to Mucosal Inflammation, With Hormonal Contraception as an Additional Modulator of Inflammatory Signatures
Cited by: 8
Author(s): Elizabeth H. Byrne, M Fărcăşanu, Seth M. Bloom, Nondumiso Xulu, Jiawu Xu, Barry L. Hykes, Nomfuneko A. Mafunda, Matthew R. Hayward, Mary Dong, Krista Dong, Thandeka Gumbi, Fransisca Xolisile Ceasar, Nasreen Ismail, Thumbi Ndung’u, Christina Gosmann, Musie Ghebremichael, Scott A. Handley, Caroline Mitchell, Alexandra Chloé Villani, Douglas S. Kwon
Software Mentions: 7
Published: about 3 years ago

10.1371/journal.pone.0237893

The response of culturally important plants to experimental warming and clipping in Pakistan Himalayas
Cited by: 2
Author(s): Saira Karimi, Muhammad Ali Nawaz, Saadia Naseem, Ahmed Akrem, Hussain Ali, Olivier Dangles, Zahid Ali
Software Mentions: 7
Published: over 3 years ago

10.1136/bmj.m1985

Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: prospective observational cohort study
Cited by: 2,288
Author(s): Annemarie B Docherty, Ewen M Harrison, Christopher Green, Hayley Hardwick, Riinu Pius, Lisa Norman, Karl Holden, Jonathan M. Read, Frank Dondelinger, Gail Carson, Laura Merson, James Lee, Daniel Plotkin, Louise Sigfrid, Sophie Halpin, Clare Jackson, Carrol Gamble, Peter Horby, Jonathan S Nguyen‐Van‐Tam, Antonia Ho, Clark D Russell, Jake Dunning, Peter Openshaw, J Kenneth Baillie, Malcolm G Semple
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0250170

Introducing Point-of-Interest as an alternative to Area-of-Interest for fixation duration analysis
Cited by: 7
Author(s): Nak Won Rim, Kyoung Whan Choe, Coltan Scrivner, Marc G. Berman
Software Mentions: 7
Published: over 3 years ago

10.3390/jpm11060582

Body Mass Index and Birth Weight Improve Polygenic Risk Score for Type 2 Diabetes
Cited by: 11
Author(s): Avigail Moldovan, Yedael Y. Waldman, Nadav Brandes, Michal Linial
Software Mentions: 7
Published: over 3 years ago

10.3389/fpsyg.2019.03013

Language Processing as a Precursor to Language Change: Evidence From Icelandic
Cited by: 9
Author(s): Ina Bornkessel‐Schlesewsky, Dietmar Roehm, Robert Mailhammer
Software Mentions: 7
Published: almost 5 years ago

10.3389/fpsyt.2021.668297

Estimating the Prevalence and Genetic Risk Mechanisms of ARFID in a Large Autism Cohort
Cited by: 26
Author(s): Tanner Koomar, Taylor Thomas, Natalie R. Pottschmidt, Michael Lutter, Jacob J. Michaelson
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0241777

Soil nematode functional diversity, successional patterns, and indicator taxa associated with vertebrate decomposition hotspots
Cited by: 7
Author(s): Lois S. Taylor, Gary L. Phillips, Ernest C. Bernard, Jennifer M. DeBruyn
Software Mentions: 7
Published: about 4 years ago

10.1186/s12859-021-04233-1

BREC: an R package/Shiny app for automatically identifying heterochromatin boundaries and estimating local recombination rates along chromosomes
Cited by: 2
Author(s): Yasmine Mansour, Annie Château, Anna-Sophie Fiston-Lavier
Software Mentions: 7
Published: over 3 years ago

10.1186/s12889-020-09977-8

Epidemiological and time series analysis on the incidence and death of AIDS and HIV in China
Cited by: 18
Author(s): Bin Xu, Jiayuan Li, Mengqiao Wang
Software Mentions: 7
Published: almost 4 years ago

10.7554/eLife.62669

Systematic identification of cis-regulatory variants that cause gene expression differences in a yeast cross
Cited by: 14
Author(s): Kaushik Renganaath, Rocky Cheung, Laura Day, Sriram Kosuri, Leonid Kruglyak, Frank W. Albert
Software Mentions: 7
Published: about 4 years ago

10.1371/journal.pone.0230888

Site-specific machine learning predictive fertilization models for potato crops in Eastern Canada
Cited by: 13
Author(s): Zonlehoua Coulibali, Athyna N. Cambouris, Léon‐Étienne Parent
Software Mentions: 7
Published: over 4 years ago

10.3390/microorganisms9081642

Culture-Independent and Culture-Dependent Characterization of the Black Soldier Fly Gut Microbiome Reveals a Large Proportion of Culturable Bacteria with Potential for Industrial Applications
Cited by: 20
Author(s): Dorothee Tegtmeier, Sabine Hurka, Sanja Mihajlović, Maren Bodenschatz, Stephanie Schlimbach, Andreas Vilcinskas
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0182212

Monitoring of Schmallenberg virus in Spanish wild artiodactyls, 2006–2015
Cited by: 16
Author(s): Ignacio García‐Bocanegra, David Cano‐Terriza, Gema Vidal, Rosa Rosell, Jorge Paniagua, Saúl Jiménez-Ruíz, Carlos Expósito, Antonio Rivero‐Juárez, Antonio Arenas, Joan Pujols
Software Mentions: 7
Published: over 7 years ago

10.3390/microorganisms9020227

Use of Network Analysis and Spread Models to Target Control Actions for Bovine Tuberculosis in a State from Brazil
Cited by: 4
Author(s): Nicolás Céspedes Cárdenas, Pilar Pozo, Francisco Paulo Nunes Lopes, José Henrique Hildebrand Grisi-Filho, Julio Álvarez
Software Mentions: 7
Published: almost 4 years ago

10.1002/evl3.245

Widespread cryptic variation in genetic architecture between the sexes
Cited by: 11
Author(s): Wouter van der Bijl, Judith E. Mank
Software Mentions: 7
Published: over 3 years ago

10.1186/s12888-021-03501-x

Validation of case definitions of depression derived from administrative data against the CIDI-SF as reference standard: results from the PROspective Québec (PROQ) study
Cited by: 3
Author(s): Ana Paula Bruno Pena-Gralle, Denis Talbot, Xavier Trudel, Karine Aubé, Alain Lesage, Sophie Lauzier, Alain Milot, Chantal Brisson
Software Mentions: 7
Published: about 3 years ago

10.1371/journal.pone.0239081

Diazotrophic bacteria from maize exhibit multifaceted plant growth promotion traits in multiple hosts
Cited by: 11
Author(s): Shawn M. Higdon, Tania Pozzo, Emily J. Tibbett, Colleen Chiu, Richard Jeannotte, Bart C. Weimer, A. B. Bennett
Software Mentions: 7
Published: about 4 years ago

10.7554/eLife.60176

Chloroplast acquisition without the gene transfer in kleptoplastic sea slugs, Plakobranchus ocellatus
Cited by: 21
Author(s): Taro Maeda, Shunichi Takahashi, Takao Yoshida, Shigeru Shimamura, Yoshihiro Takaki, Yukiko Nagai, Atsushi Toyoda, Yutaka Suzuki, Asuka Arimoto, Hisaki Ishii, Nori Satoh, Tomoaki Nishiyama, Mitsuyasu Hasebe, Tadashi Maruyama, Jun Minagawa, Junichi Obokata, Shuji Shigenobu
Software Mentions: 7
Published: over 3 years ago

10.1007/s11136-021-02880-8

Support for the higher-order factor structure of the WHODAS 2.0 self-report version in a Dutch outpatient psychiatric setting
Cited by: 3
Author(s): Guido L. Williams, Edwin de Beurs, Philip Spinhoven, Gerard Flens, Muirne C. S. Paap
Software Mentions: 7
Published: over 3 years ago

10.1155/2019/8047627

Short-Term Activation of Peroxisome Proliferator-Activated Receptors<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" id="M1"><mml:mrow><mml:mi>α</mml:mi></mml:mrow></mml:math>and<mml:math xmlns:mml="http://www.w3.org/1998/Math/MathML" id="M2"><mml:mrow><mml:mi>γ</mml:mi></mml:mrow></mml:math>Induces Tissue-Specific Effects on Lipid Metabolism and Fatty Acid Composition in Male Wistar Rats
Cited by: 18
Author(s): Elin Strand, Vegard Lysne, Mari Lausund Grinna, Pavol Bohov, Asbjørn Svardal, Ottar Nygård, Rolf K. Berge, Bodil Bjørndal
Software Mentions: 7
Published: over 5 years ago

10.3389/fphar.2021.613805

Prolonged Medical Cannabis Treatment is Associated With Quality of Life Improvement and Reduction of Analgesic Medication Consumption in Chronic Pain Patients
Cited by: 16
Author(s): Joshua Aviram, Gil M. Lewitus, Yelena Vysotski, Ben Yellin, Paula Berman, Anna Shapira, David Meiri
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0256068

Parasitism to mutualism continuum for Joshua trees inoculated with different communities of arbuscular mycorrhizal fungi from a desert elevation gradient
Cited by: 5
Author(s): Jennifer Harrower, Gregory S. Gilbert
Software Mentions: 7
Published: about 3 years ago

10.1186/s12891-020-03889-9

High blood pressure and overweight in children with Legg-Calvé-Perthes disease: a nationwide population-based cohort study
Cited by: 6
Author(s): Gabriella B. Mörlin, Yasmin D. Hailer
Software Mentions: 7
Published: almost 4 years ago

10.1098/rsos.201036

Movements and residency of Caribbean reef sharks at a remote atoll in Belize, Central America
Cited by: 6
Author(s): Ivy E. Baremore, Rachel T. Graham, George H. Burgess, Daniel W. Castellanos
Software Mentions: 7
Published: over 3 years ago

10.3390/jcm7120567

Systematic Review of Variations in Hyperthermic Intraperitoneal Chemotherapy (HIPEC) for Peritoneal Metastasis from Colorectal Cancer
Cited by: 57
Author(s): Can Yurttas, Giulia Hoffmann, Alexander Tolios, Sebastian P. Haen, Matthias Schwab, Ingmar Königsrainer, Alfred Königsrainer, Stefan Beckert, Markus Löffler
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0211692

The impact of bipedal mechanical loading history on longitudinal long bone growth
Cited by: 7
Author(s): A. D. Foster
Software Mentions: 7
Published: almost 6 years ago

10.1186/s40793-019-0348-0

Microbial community dynamics and coexistence in a sulfide-driven phototrophic bloom
Cited by: 13
Author(s): Srijak Bhatnagar, Elise S. Cowley, Sebastian Kopf, Sherlynette Pérez Castro, Sean M. Kearney, Scott C. Dawson, Kurt Hanselmann, S. Emil Ruff
Software Mentions: 7
Published: almost 5 years ago

10.3390/metabo11030186

Elemental and Isotopic Characterization of Tobacco from Umbria
Cited by: 3
Author(s): Luana Bontempo, D. Bertoldi, Pietro Franceschi, Fabio Rossi, R. Larcher
Software Mentions: 7
Published: over 3 years ago

10.3389/fpls.2020.00698

Production and Selection of Quality Protein Popcorn Hybrids Using a Novel Ranking System and Combining Ability Estimates
Cited by: 11
Author(s): Leandra Parsons, Ying Ren, Abou Yobi, Preston Hurst, Ruthie Angelovici, Oscar Rodrı́guez, David R. Holding
Software Mentions: 7
Published: over 4 years ago

10.3390/jcm10173945

High Central Venous Pressure after Cardiac Surgery Might Depict Hemodynamic Deterioration Associated with Increased Morbidity and Mortality
Cited by: 5
Author(s): Fridtjof Schiefenhövel, Ralf Trauzeddel, Michael Sander, Matthias Heringlake, Heinrich V. Groesdonk, Herko Grubitzsch, Jochen Kruppa, Christian Berger, Sascha Treskatsch, Felix Balzer
Software Mentions: 7
Published: about 3 years ago

10.3390/ijerph18168514

Younger Age in Adolescent Pregnancies Is Associated with Higher Risk of Adverse Outcomes
Cited by: 6
Author(s): María de la Calle, José Luis Bartha, Cristina M. López, M Turiel, N. Arias Martínez, Silvia M. Arribas, David Ramiro-Cortijo
Software Mentions: 7
Published: over 3 years ago

10.7554/eLife.68812

Impact of asymptomatic Plasmodium falciparum infection on the risk of subsequent symptomatic malaria in a longitudinal cohort in Kenya
Cited by: 14
Author(s): Kelsey M. Sumner, Judith Mangeni, Andrew Obala, Elizabeth Freedman, Lucy Abel, Steven R. Meshnick, Jessie K. Edwards, Brian W. Pence, Wendy Prudhomme-O’Meara, Steve M. Taylor
Software Mentions: 7
Published: over 3 years ago

10.1172/jci.insight.148035

Single-cell immunophenotyping of the skin lesion erythema migrans identifies IgM memory B cells
Cited by: 7
Author(s): Ruoyi Jiang, Hailong Meng, Khadir Raddassi, Ira Fleming, Kenneth B. Hoehn, Kenneth R. Dardick, Alexia A. Belperron, Ruth R. Montgomery, Alex K. Shalek, David A. Hafler, Steven H. Kleinstein, Linda K. Bockenstedt
Software Mentions: 7
Published: over 3 years ago

10.1128/mSystems.00264-19

A Genome-Based Species Taxonomy of the <i>Lactobacillus</i> Genus Complex
Cited by: 46
Author(s): Stijn Wittouck, Sander Wuyts, Conor J. Meehan, Vera van Noort, Sarah Lebeer
Software Mentions: 7
Published: about 5 years ago

10.3390/jfmk5040072

Body Composition Changes over Multiple Academic Years in Female Collegiate Soccer Players
Cited by: 0
Author(s): Austin Katona, Caroline Riewe, Angela Bruzina, Nicholas J. Ollberding, Mary Ankrom, Jon G. Divine, Robert E. Mangine, Abigail Peairs
Software Mentions: 7
Published: about 4 years ago

10.3389/fmicb.2021.656250

Temperature and Nutrient Limitations Decrease Transfer of Conjugative IncP-1 Plasmid pKJK5 to Wild Escherichia coli Strains
Cited by: 15
Author(s): Rebeca Pallares-Vega, G. Macedo, Michael S.M. Brouwer, Lucía Hernández Leal, Peter van der Maas, Mark C.M. van Loosdrecht, David G. Weissbrodt, Dick Heederik, Dik Mevius, Heike Schmitt
Software Mentions: 7
Published: over 3 years ago

10.3390/insects11080460

Honeydew Deposition by the Giant Willow Aphid (Tuberolachnus salignus) Affects Soil Biota and Soil Biochemical Properties
Cited by: 7
Author(s): Kyaw Min Tun, Andrea Clavijo McCormick, Trevor Jones, Stanislav Garbuz, Maria A. Minor
Software Mentions: 7
Published: over 4 years ago

10.1128/mSphere.00737-20

Comparative Genomics Analyses of Lifestyle Transitions at the Origin of an Invasive Fungal Pathogen in the Genus <i>Cryphonectria</i>
Cited by: 16
Author(s): Lea Stauber, Simone Prospero, Daniel Croll
Software Mentions: 7
Published: about 4 years ago

10.1016/S2665-9913(21)00104-1

Non-steroidal anti-inflammatory drug use and outcomes of COVID-19 in the ISARIC Clinical Characterisation Protocol UK cohort: a matched, prospective cohort study
Cited by: 54
Author(s): Thomas M Drake, Cameron J Fairfield, Riinu Pius, Stephen R Knight, Lisa Norman, Michelle Girvan, Hayley Hardwick, Annemarie B Docherty, Ryan S. Thwaites, Peter Openshaw, J Kenneth Baillie, Ewen M Harrison, Malcolm G Semple, Peter Openshaw, Gail Carson, Beatrice Alex, Benjamin Bach, William Barclay, Debby Bogaert, Meera Chand, Graham Cooke, Ana da Silva Filipe, Thushan I. de Silva, Jake Dunning, Tom Fletcher, Christopher Green, Julian A. Hiscox, Antonia Ho, Peter Horby, Samreen Ijaz, Say Khoo, Paul Klenerman, Andrew Law, Wei Shen Lim, Alexander J. Mentzer, Laura Merson, Alison Meynert, Shona C. Moore, Mahdad Noursadeghi, Massimo Palmarini, William A. Paxton, Georgios Pollakis, Nicholas Price, Andrew Rambaut, David L. Robertson, Clark D Russell, Vanessa Sancho‐Shimizu, Janet T. Scott, Louise Sigfrid, Tom Solomon, Shiranee Sriskandan, D.I. Stuart, Charlotte Summers, Richard S. Tedder, AA Roger Thompson, Emma C. Thomson, Lance Turtle, Maria Zambon, Chloe Donohue, Fiona Griffiths, Hayley Hardwick, Ruth Lyons, Wilna Oosthuyzen, Kenneth A McLean, Derek Murphy, Catherine Shaw, Marie Connor, Jo Ann Dalton, Carrol Gamble, Sophie Halpin, Janet Harrison, Clare Jackson, Laura Marsh, Stephanie Roberts, Eglė Savičiūtė, Sara Clohisey, Ross Hendry, Gary Leeming, James Scott-Brown, Murray Wham, William Greenhalf, Sara McDonald, Victoria Shaw, Seán Keating, Katie A. Ahmed, J. A. Armstrong, Milton Ashworth, Innocent G Asiimwe, Siddharth Bakshi, Samantha L. Barlow, Laura Booth, Benjamin Brennan, Katie Bullock, Nicola Carlucci, Emily Cass, Benjamin W. A. Catterall, Jordan Clark, Emily Clarke, Sarah Cole, Louise Cooper, Helen Cox, Chris Davis, Oslem Dincarslan, Alejandra Doce Carracedo, Chris Dunn, Philip Dyer, Angela Elliott, Anthony Evans, Lorna Finch, L. W. Fisher, Lisa Flaherty, Terry Foster, Isabel García-Dorival, Philip Gunning, Catherine Hartley, Anthony Holmes, Rebecca L. Jensen, Christopher B. Jones, Trevor R. Jones, Shadia Khandaker, Katharine King, Robyn T. Kiy, Chrysa Koukorava, Annette Lake, Suzannah Lant, Diane Latawiec, Lara Lavelle-Langham, Daniella Lefteri, Lauren Lett, Lucia A Livoti, Maria Elisabetta Mancini, Hannah Massey, Nicole Maziere, Sarah McDonald, Laurence McEvoy, John McLauchlan, Soeren Metelmann, Nahida S. Miah, Joanna Middleton, Joyce M. Mitchell, Ellen Murphy, Rebekah Penrice-Randal, Jack Pilgrim, Tessa Prince, Will Reynolds, Paul Ridley, Debby Sales, Victoria Shaw, Rebecca K. Shears, Benjamin Small, Krishanthi Subramaniam, Agnieska Szemiel, Aislynn Taggart, Jolanta Tanianis-Hughes, Jordan Thomas, Erwan Trochu, Libby van Tonder, Eve Wilcock, J. Eunice Zhang, Alan Maclean, Sarah McCafferty, Kirstie Morrice, Lee Murphy, Nicola Wrobel, Kayode Adeniji, Daniel Agranoff, Ken Agwuh, Dhiraj Ail, Erin L. Aldera, Ana Alegria, Brian Angus, Abdul Ashish, D. Atkinson, Shahedal Bari, Gavin Barlow, Stella Barnass, Nicholas Barrett, Christopher Bassford, Sneha Basude, David Baxter, Michael Beadsworth, Jolanta Bernatoniene, John C. Berridge, Nicola Best, Pieter Bothma, Robin Brittain-Long, Naomi Bulteel, Tom Burden, Andrew Burtenshaw, Vikki Caruth, David Chadwick, Duncan Chambler, Nigel Chee, Jenny Child, Srikanth Chukkambotla, Tom Clark, Paul Collini, Catherine Cosgrove, Jason Cupitt, Maria-Teresa Cutino-Moguel, Paul Dark, Chris Dawson, Samir Dervisevic, Phil Donnison, Sam Douthwaite, Ingrid DuRand, Ahilanandan Dushianthan, Tristan Dyer, Cariad Evans, Alice C Eziefula, Chrisopher Fegan, Adam Finn, Duncan Fullerton, Sanjeev Garg, Atul Garg, Effrossyni Gkrania‐Klotsas, Jo Godden, Arthur R. Goldsmith, Clive Graham, Elaine Hardy, Stuart Hartshorn, Daniel Harvey, Peter Havalda, Daniel B Hawcutt, Maria Hobrok, Luke Hodgson, Anil Hormis, Michael Jacobs, Susan Jain, Paul Jennings, Agilan Kaliappan, Vidya Kasipandian, Stephen Kegg, M.C. Kelsey, Jason Kendall, Caroline Kerrison, Ian Kerslake, Oliver Koch, Gouri Koduri, George Koshy, Shondipon Laha, Steven Laird, Susan Larkin, Tamás Leiner, Patrick Lillie, James Limb, Vanessa Linnett, Jeff Little, Mark D Lyttle, Michael MacMahon, Emily Macnaughton, Ravish Mankregod, Huw Masson, Elijah Matovu, Katherine McCullough, Ruth McEwen, Manjula Meda, Gary H. Mills, Jane Minton, Mariyam Mirfenderesky, Kavya Mohandas, Quen Mok, James Moon, Elinoor Moore, Patrick Morgan, Craig C. Morris, Katherine Mortimore, Samuel Moses, Mbiye Mpenge, Rohinton Mulla, Michael V. Murphy, Thapas Nagarajan, Megan Nagel, Mark Nelson, Matthew K. O’Shea, Marlies Ostermann, Igor Otahal, Mark Pais, Selva Panchatsharam, Danai Papakonstantinou, Padmasayee Papineni, Hassan Paraiso, Brij Patel, Natalie Pattison, Justin Pepperell, Mark Peters, Mandeep Phull, Stefania Pintus, Frank A. Post, David J. Price, Rachel Prout, Nikolas Rae, Henrik Reschreiter, Tim Reynolds, Neil Richardson, Mark Roberts, Devender Roberts, Alistair Rose, Guy Rousseau, Brendan Ryan, Taranprit Saluja, Sarah Sarah, Aarti Shah, Manu Shankar-Hari, Prad Shanmuga, Anil Sharma, Anna Shawcross, Jagtur Singh Pooni, Jeremy Sizer, Richard Smith, Catherine Snelson, Nick Spittle, Nikki Staines, Tom Stambach, Richard Stewart, Pradeep Subudhi, Tamás Szakmány, Kate Tatham, Thomas Jo, Chris Thompson, Robert J. Thompson, Ascanio Tridente, Darell Tupper-Carey, Mary Twagira, Andrew Ustianowski, Nick Vallotton, Lisa Vincent-Smith, Shico Visuvanathan, Alan Vuylsteke, Sam Waddy, Rachel Wake, Andrew Walden, Ingeborg Welters, Tony Whitehouse, Paul Whittaker, Ashley Whittington, Meme Wijesinghe, Martin Williams, Lawrence A. Wilson, Stephen Winchester, Martin Wiselka, Adam Wolverson, Daniel G. Wooton, Andrew Workman, Bryan Yates, Peter Young
Software Mentions: 7
Published: over 3 years ago

10.3390/cancers13174476

Combining APR-246 and HDAC-Inhibitors: A Novel Targeted Treatment Option for Neuroblastoma
Cited by: 8
Author(s): Michael Müller, Lisa Rösch, Sara Najafi, Charlotte Gatzweiler, Johannes Ridinger, Xenia F Gerloff, David Jones, Jochen Baßler, Sina Kreth, Sabine Stainczyk, Karen Frese, Benjamin Meder, Frank Westermann, Till Milde, Heike Peterziel, Olaf Witt, Ina Oehme
Software Mentions: 7
Published: about 3 years ago

10.1016/j.lanepe.2021.100029

Adverse events of interest following influenza vaccination, a comparison of cell culture-based with egg-based alternatives: English sentinel network annual report paper 2019/20
Cited by: 6
Author(s): Simon de Lusignan, Ruby S M Tsang, Gayatri Amirthalingam, Oluwafunmi Akinyemi, Julian Sherlock, Manasa Tripathy, Alexandra Deeks, Filipa Ferreira, Gary Howsam, F D Richard Hobbs, Mark Joy
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0237419

Development and validation of a model for individualized prediction of hospitalization risk in 4,536 patients with COVID-19
Cited by: 106
Author(s): Lara Jehi, Xinge Ji, Alex Milinovich, Serpil C. Erzurum, Amy Merlino, Steve Gordon, James B. Young, Michael W. Kattan
Software Mentions: 7
Published: over 4 years ago

10.3390/cancers13184710

Virtual Monoenergetic Images of Dual-Energy CT—Impact on Repeatability, Reproducibility, and Classification in Radiomics
Cited by: 10
Author(s): André Euler, Fabian Christopher Laqua, D. Cester, Niklas Lohaus, Thomas Sartoretti, Daniel Pinto dos Santos, Hatem Alkadhi, Bettina Baeßler
Software Mentions: 7
Published: about 3 years ago

10.1186/s12942-019-0173-0

Citizen science informs human-tick exposure in the Northeastern United States
Cited by: 37
Author(s): W. Tanner Porter, Peter J. Motyka, Julie Wachara, Zachary A. Barrand, Zahraa Hmood, Marya McLaughlin, Kelsey Pemberton, Nathan C. Nieto
Software Mentions: 7
Published: over 5 years ago

10.7554/eLife.51529

Imp/IGF2BP levels modulate individual neural stem cell growth and division through myc mRNA stability
Cited by: 48
Author(s): Tamsin J Samuels, Aino I Järvelin, David Ish‐Horowicz, Ilan Davis
Software Mentions: 7
Published: almost 5 years ago

10.1186/s13073-019-0644-8

Clinical utility of custom-designed NGS panel testing in pediatric tumors
Cited by: 77
Author(s): Lea F. Surrey, Suzanne P. MacFarland, Fengqi Chang, Ke Cao, Komal S. Rathi, Gozde Akgumus, Daniel Gallo, Fumin Lin, Adam Gleason, Pichai Raman, Richard Aplenc, Rochelle Bagatell, Jane E. Minturn, Yaël P. Mossé, Mariarita Santi, Sarah K. Tasian, Angela J. Waanders, Mahdi Sarmady, John M. Maris, Stephen P. Hunger, Marilyn M. Li
Software Mentions: 6
Published: over 5 years ago

10.3390/antiox10040595

Antioxidants-Related Superoxide Dismutase (SOD), Catalase (CAT), Glutathione Peroxidase (GPX), Glutathione-S-Transferase (GST), and Nitric Oxide Synthase (NOS) Gene Variants Analysis in an Obese Population: A Preliminary Case-Control Study
Cited by: 28
Author(s): Amani M T Gusti, Safaa Qusti, Eida M. Alshammari, Eman A. Toraih, Manal S. Fawzy
Software Mentions: 6
Published: over 3 years ago

10.3390/brainsci11030323

Changes in Representation of Thalamic Projection Neurons within Prefrontal-Thalamic-Hippocampal Circuitry in a Rat Model of Third Trimester Binge Drinking
Cited by: 1
Author(s): Zachary H Gursky, Anna Y. Klintsova
Software Mentions: 6
Published: over 3 years ago

10.3390/brainsci9120381

A Pathway-Based Genomic Approach to Identify Medications: Application to Alcohol Use Disorder
Cited by: 6
Author(s): Laura B. Ferguson, Shruti Patil, Bailey A. Moskowitz, Igor Ponomarev, R. Adron Harris, R. Dayne Mayfield, Robert O. Messing
Software Mentions: 6
Published: almost 5 years ago

10.1002/brb3.2259

Changes in the gut microbiome associated with infliximab in patients with bipolar disorder
Cited by: 3
Author(s): Aadil Bharwani, Jake C. Szamosi, Valerie H. Taylor, Yena Lee, Asem Bala, Rodrigo B. Mansur, Mehala Subramaniapillai, Michael G. Surette, Roger S. McIntyre
Software Mentions: 6
Published: over 3 years ago

10.1093/brain/awab142

Locus coeruleus integrity and the effect of atomoxetine on response inhibition in Parkinson’s disease
Cited by: 44
Author(s): Claire O’Callaghan, Frank H. Hezemans, Rong Ye, Catarina Rua, P Simon Jones, Alexander G Murley, Negin Holland, Ralf Regenthal, Kamen A. Tsvetanov, Noham Wolpe, Roger A. Barker, Caroline H. Williams‐Gray, Trevor W. Robbins, Luca Passamonti, James B. Rowe
Software Mentions: 6
Published: over 3 years ago

10.1242/dmm.049012

Transcriptomic analyses of gastrulation-stage mouse embryos with differential susceptibility to alcohol
Cited by: 16
Author(s): Karen E. Boschen, Travis Ptacek, Matthew E. Berginski, Jeremy M. Simon, Scott E. Parnell
Software Mentions: 6
Published: over 3 years ago

10.1186/s12864-020-6616-y

Association and linkage mapping to unravel genetic architecture of phenological traits and lateral bearing in Persian walnut (Juglans regia L.)
Cited by: 29
Author(s): Anthony Bernard, Annarita Marrano, Armel Donkpegan, Patrick J. Brown, Charles A. Leslie, David B. Neale, Fabrice Lheureux, Elisabeth Dirlewanger
Software Mentions: 6
Published: over 4 years ago

10.3390/genes12040549

Clinical Identification of Dysregulated Circulating microRNAs and Their Implication in Drug Response in Triple Negative Breast Cancer (TNBC) by Target Gene Network and Meta-Analysis
Cited by: 15
Author(s): Amal Qattan, Taher Al‐Tweigeri, Wafa Alkhayal, Kausar Suleman, Asma Tulbah, Suad Bin Amer
Software Mentions: 6
Published: over 3 years ago

10.3390/genes12081276

Hypomethylation of AHRR (cg05575921) Is Related to Smoking Status in the Mexican Mestizo Population
Cited by: 1
Author(s): Omar Andrés Bravo-Gutiérrez, Ramcés Falfán-Valencia, Alejandra Ramírez‐Venegas, Raúl H Sansores, Rafael de Jesús Hernández-Zenteno, Andrea Hernández-Pérez, Leonor García-Gómez, Jennifer Osio-Echánove, Edgar Abarca-Rojano, Gloría Pérez-Rubio
Software Mentions: 6
Published: over 3 years ago

10.1186/s41512-018-0036-3

Methods for Evaluation of medical prediction Models, Tests And Biomarkers (MEMTAB) 2018 Symposium
Cited by: 3
Author(s):
Software Mentions: 6
Published: over 6 years ago

10.3390/biom10071041

Untargeted LC-MS Metabolomics Differentiates Between Virulent and Avirulent Clinical Strains of Pseudomonas aeruginosa
Cited by: 18
Author(s): Tobias Depke, Janne G. Thöming, Adrian Kordes, Susanne Häußler, Mark Brönstrup
Software Mentions: 6
Published: over 4 years ago

10.3390/pathogens9010024

Genome-Wide Analysis of Cyclophilin Proteins in 21 Oomycetes
Cited by: 2
Author(s): Yan Zhang, Kyle Fletcher, Rongkui Han, Richard W. Michelmore, Ruiwu Yang
Software Mentions: 6
Published: almost 5 years ago

10.1186/s12872-021-02135-x

Combined evaluation of coronary artery disease and high-sensitivity cardiac troponin T for prediction of adverse events in patients with hypertrophic cardiomyopathy
Cited by: 3
Author(s): Hang Liao, Huay Cheem Tan, Ziqiong Wang, Xiaoping Chen, Yong He, Sen He
Software Mentions: 6
Published: over 3 years ago

10.1038/s41419-019-1453-0

Organoids as a new model for improving regenerative medicine and cancer personalized therapy in renal diseases
Cited by: 101
Author(s): Ludovica Grassi, Romina Alfonsi, Federica Francescangeli, Michele Signore, Maria Laura De Angelis, Antonio Addario, Manuela Costantini, Elisabetta Flex, Andrea Ciolfi, Simone Pizzi, Alessandro Bruselles, Matteo Pallocca, Giuseppe Simone, Mustapha Haoui, Mario Falchi, Michèle Milella, Steno Sentinelli, P. Di Matteo, Emilia Stellacci, Michele Gallucci, Giovanni Muto, Marco Tartaglia, Ruggero De Maria, Désirée Bonci
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-021-90409-x

High-throughput phenotyping methods for quantifying hair fiber morphology
Cited by: 1
Author(s): Tina Lasisi, Arslan Zaidi, Timothy H. Webster, Nicholas Stephens, Kendall Routch, Nina G. Jablonski, Mark D. Shriver
Software Mentions: 6
Published: over 3 years ago

10.1007/s00268-021-06217-x

Postoperative Pain Relief after Pancreatic Resection: Systematic Review and Meta-Analysis of Analgesic Modalities
Cited by: 9
Author(s): Nasreen Akter, B. Ratnayake, Daniel Joh, S.B. Chan, Emily Bonner, Sanjay Pandanaboyana
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-020-80618-1

Field evaluation of two mosquito traps in Zhejiang Province, China
Cited by: 3
Author(s): Juan Hou, Yinping Wu, Zhiyuan Mao, Zhu Xinhong, Yuheng Wu, Qinmei Liu, Jinna Wang, Tianqi Li, Zhenyu Gong, Xuanjun Dong, Wang Zhen
Software Mentions: 6
Published: almost 4 years ago

10.3389/fspor.2020.518148

A Systematic Review and Meta-Analysis on the Longitudinal Effects of Unilateral Knee Extension Exercise on Muscle Strength
Cited by: 1
Author(s): Ekin Altan, Svenja Elizabeth Seide, Ismail Bayram, Leonardo Gizzi, Hayri Ertan, Oliver Röhrle
Software Mentions: 6
Published: about 4 years ago

10.3390/bs10120194

Anxiety-Related Attention Bias in Four- to Eight-Year-Olds: An Eye-Tracking Study
Cited by: 4
Author(s): Suzannah Stuijfzand, Bobby Stuijfzand, Shirley Reynolds, Helen F. Dodd
Software Mentions: 6
Published: almost 4 years ago

10.3389/fvets.2021.652015

Rein Tension Signals Elicit Different Behavioral Responses When Comparing Bitted Bridle and Halter
Cited by: 4
Author(s): Marie Eisersiö, Anna Byström, Jenny Yngvesson, Paolo Baragli, Antonio Lanatá, Agneta Egenvall
Software Mentions: 6
Published: over 3 years ago

10.1242/dmm.044776

Maltodextrin-induced intestinal injury in a neonatal mouse model
Cited by: 5
Author(s): Pratibha Singh, Lady Leidy Sanchez-Fernandez, David Ramiro-Cortijo, Pedro Ochoa‐Allemant, George Perides, Yan Liu, Esli Medina-Morales, William Yakah, Steven D. Freedman, Camilia R. Martin
Software Mentions: 6
Published: almost 5 years ago

10.1038/s41598-020-77878-2

Recent land use and management changes decouple the adaptation of livestock diversity to the environment
Cited by: 9
Author(s): Elena Velado‐Alonso, Ignacio Morales‐Castilla, Antonio Gómez‐Sal
Software Mentions: 6
Published: almost 4 years ago

10.1371/journal.pone.0221058

Relations of advanced glycation endproducts and dicarbonyls with endothelial dysfunction and low-grade inflammation in individuals with end-stage renal disease in the transition to renal replacement therapy: A cross-sectional observational study
Cited by: 20
Author(s): Remy J H Martens, Natascha J. H. Broers, Bernard Canaud, Maarten H. L. Christiaans, T. Cornelis, Adelheid Gauly, Marc Hermans, Constantijn Konings, Frank M. van der Sande, Jean L.J.M. Scheijen, Frank Stifft, Joris J. J. M. Wirtz, Jeroen P. Kooman, Casper G. Schalkwijk
Software Mentions: 6
Published: over 5 years ago

10.3389/fimmu.2018.01634

Robust B Cell Responses Predict Rapid Resolution of Lyme Disease
Cited by: 22
Author(s): Lisa K. Blum, Julia Z. Adamska, Dale S. Martin, Alison W. Rebman, Serra E. Elliott, Richard R.L. Cao, Monica E. Embers, Mark J. Soloski, William H. Robinson
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0239518

Peer review and preprint policies are unclear at most major journals
Cited by: 26
Author(s): Thomas Klebel, Stefan Reichmann, Jessica Polka, Gary S. McDowell, Naomi Penfold, Samantha Hindle, Tony Ross-Hellauer
Software Mentions: 6
Published: about 4 years ago

10.1534/g3.119.400659

Excess Light Priming in <i>Arabidopsis thaliana</i> Genotypes with Altered DNA Methylomes
Cited by: 7
Author(s): Diep R Ganguly, Bethany A. B. Stone, Andrew F Bowerman, Steven R. Eichten, Barry J. Pogson
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-021-81728-0

The impact of tinnitus distress on cognition
Cited by: 21
Author(s): Patrick Neff, Jorge Simões, S Psatha, Nyamaa Amarjargal, Benjamin Boecking, Leonie Rausch, Juliane Dettling-Papargyris, Christine Funk, Petra Brüeggemann, Birgit Mazurek
Software Mentions: 6
Published: almost 4 years ago

10.1038/s41598-020-64516-0

Cyto-Feature Engineering: A Pipeline for Flow Cytometry Analysis to Uncover Immune Populations and Associations with Disease
Cited by: 7
Author(s): Amy Fox, Taru Dutt, Burton Karger, Mauricio Rojas, Andrés Obregón-Henao, G. Brooke Anderson, Marcela Henao-Tamayo
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0241704

Evaluating the effectiveness of a group-based resilience intervention versus psychoeducation for emergency responders in England: A randomised controlled trial
Cited by: 19
Author(s): Jennifer Wild, Shama El-Salahi, Michelle Degli Esposti, Graham R. Thew
Software Mentions: 6
Published: about 4 years ago

10.3390/v12020171

Estimating the Risk of Human Herpesvirus 6 and Cytomegalovirus Transmission to Ugandan Infants from Viral Shedding in Saliva by Household Contacts
Cited by: 19
Author(s): Bryan T. Mayer, Elizabeth M Krantz, Anna Wald, Lawrence Corey, Corey Casper, Soren Gantt, Joshua T. Schiffer
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0199758

Antipsychotic prescribing patterns on admission to and at discharge from a tertiary care program for treatment-resistant psychosis
Cited by: 7
Author(s): Lik Hang N. Lee, Ric M. Procyshyn, Ralph de Vere White, Todd S. Woodward, William G. Honer, Alasdair M. Barr
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0245445

Three-dimensional geometric morphometric studies of modern human occipital variation
Cited by: 7
Author(s): Yameng Zhang, Lynne A. Schepartz
Software Mentions: 6
Published: almost 4 years ago

10.1038/s41598-020-69635-2

Rapid fragmentation of microplastics by the freshwater amphipod Gammarus duebeni (Lillj.)
Cited by: 91
Author(s): Alicia Mateos-Cárdenas, John O’Halloran, Frank N.A.M. van Pelt, Marcel A. K. Jansen
Software Mentions: 6
Published: over 4 years ago

10.3389/fpsyg.2018.02170

Distributed Practice: Rarely Realized in Self-Regulated Mathematical Learning
Cited by: 10
Author(s): Katharina Barzagar Nazari, Mirjam Ebersbach
Software Mentions: 6
Published: about 6 years ago

10.1016/j.cortex.2018.02.009

Probing the role of the vestibular system in motivation and reward-based attention
Cited by: 14
Author(s): Elvio Blini, Caroline Tilikete, Alessandro Farnè, Fadila Hadj-Bouziane
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0256678

Hospital-level factors associated with death during pneumonia-associated hospitalization among adults—New York City, 2010–2014
Cited by: 0
Author(s): Kate Whittemore, Kristian M. Garcia, Chaorui Huang, Sungwoo Lim, Demetre Daskalakis, Neil M. Vora, David E. Lucero
Software Mentions: 6
Published: about 3 years ago

10.3389/fpsyg.2020.582221

Prosodic Entrainment in Conversations of Verbal Children and Teens on the Autism Spectrum
Cited by: 11
Author(s): Heike Lehnert‐LeHouillier, Susana Terrazas, Steven Sandoval
Software Mentions: 6
Published: about 4 years ago

10.1371/journal.pone.0237713

Isn’t high school bad enough already? Rates of gender harassment and institutional betrayal in high school and their association with trauma-related symptoms
Cited by: 9
Author(s): Monika N Lind, Alexis A. Adams-Clark, Jennifer J. Freyd
Software Mentions: 6
Published: over 4 years ago