cran: survminer | Projects | Ecosyste.ms: Papers

10.1186/s12967-021-02744-2

Combined lymphocyte/monocyte count, D-dimer and iron status predict COVID-19 course and outcome in a long-term care facility
Cited by: 20
Author(s): Flavia Biamonte, Cirino Botta, Maria Mazzitelli, Salvatore Rotundo, Enrico Maria Trecarichi, Daniela Foti, Carlo Torti, Giuseppe Viglietto, Daniele Torella, Francesco Costanzo
Software Mentions: 8
Published: almost 4 years ago

10.3389/fonc.2021.630905

Identification of a Metabolism-Related Signature for the Prediction of Survival in Endometrial Cancer Patients
Cited by: 14
Author(s): Fan Yuan, Xingchen Li, Li Tian, Jianliu Wang
Software Mentions: 8
Published: over 3 years ago

10.3389/fonc.2020.590006

AUNIP Expression Is Correlated With Immune Infiltration and Is a Candidate Diagnostic and Prognostic Biomarker for Hepatocellular Carcinoma and Lung Adenocarcinoma
Cited by: 14
Author(s): Chenxi Ma, Wenyan Kang, Lu Yu, Zongcheng Yang, Di Tian
Software Mentions: 8
Published: almost 4 years ago

10.1186/s12935-020-01707-9

PPP2R2B downregulation is associated with immune evasion and predicts poor clinical outcomes in triple-negative breast cancer
Cited by: 13
Author(s): Li Zheng, Yaming Li, Xiaolong Wang, Qifeng Yang
Software Mentions: 8
Published: almost 4 years ago

10.1186/s12967-021-02914-2

The landscape of gene co-expression modules correlating with prognostic genetic abnormalities in AML
Cited by: 14
Author(s): Chao Guo, Ya-yue Gao, Qianqian Ju, Chunxia Zhang, Ming Gong, Zhenling Li
Software Mentions: 8
Published: over 3 years ago

10.18632/oncotarget.22462

Transient paraproteinemia after allogeneic hematopoietic stem cell transplantation is an underexplored phenomenon associated with graft versus host disease
Cited by: 10
Author(s): Corinne C. Widmer, Stefan Balabanov, Urs Schanz, Alexandre Theocharides
Software Mentions: 8
Published: about 7 years ago

10.1136/openhrt-2020-001459

CHARGE-AF in a national routine primary care electronic health records database in the Netherlands: validation for 5-year risk of atrial fibrillation and implications for patient selection in atrial fibrillation screening
Cited by: 26
Author(s): Jelle C L Himmelreich, Wim A M Lucassen, Ralf E. Harskamp, Claire Aussems, Henk van Weert, M. Nielen
Software Mentions: 8
Published: almost 4 years ago

10.1186/s12885-021-08322-5

A metabolism-related 4-lncRNA prognostic signature and corresponding mechanisms in intrahepatic cholangiocarcinoma
Cited by: 12
Author(s): Wei Zou, Zizheng Wang, Fei Wang, Lincheng Li, Rong Liu, Minggen Hu
Software Mentions: 8
Published: over 3 years ago

10.3389/fmolb.2021.613359

Identification of a Hypoxia-Related Signature for Predicting Prognosis and the Immune Microenvironment in Bladder Cancer
Cited by: 10
Author(s): Minxiao Jiang, Ren Lang, Yuanlei Chen, Huan Wang, Haiyang Wu, Sheng Cheng, Gonghui Li, Shicheng Yu
Software Mentions: 8
Published: over 3 years ago

10.1186/s12935-020-01588-y

A four prognosis-associated lncRNAs (PALnc) based risk score system reflects immune cell infiltration and predicts patient survival in pancreatic cancer
Cited by: 14
Author(s): Hongkai Zhuang, Shanzhou Huang, Zixuan Zhou, Zuyi Ma, Zedan Zhang, Chuanzhao Zhang, Baohua Hou
Software Mentions: 8
Published: about 4 years ago

10.7150/jca.49266

Establishment of the Prognostic Index Reflecting Tumor Immune Microenvironment of Lung Adenocarcinoma Based on Metabolism-Related Genes
Cited by: 13
Author(s): Jianguo Zhang, Jianzhong Zhang, Cheng Yuan, Yuan Luo, Yangyi Li, Panpan Dai, Wenjie Sun, Nannan Zhang, Jiangbo Ren, Mengjie Zhang, Yan Gong, Conghua Xie
Software Mentions: 8
Published: almost 5 years ago

10.1155/2021/8892479

PDZ Binding Kinase/T-LAK Cell-Derived Protein Kinase Plays an Oncogenic Role and Promotes Immune Escape in Human Tumors
Cited by: 4
Author(s): Tingting Feng, Yan Zhang, Sunbin Ling, Chenyang Xu, Yingqi Lyu, Tingting Lu, Xinyuan Liu, Ying Liu, Yiming Wan, Zhong Huang, Dan Su
Software Mentions: 8
Published: about 3 years ago

10.1186/s12935-019-1028-2

Expression profile analysis identifies IER3 to predict overall survival and promote lymph node metastasis in tongue cancer
Cited by: 10
Author(s): Fang Xiao, Yinhua Dai, Yujiao Hu, Mengmeng Lu, Qun Dai
Software Mentions: 7
Published: about 5 years ago

10.7150/ijms.47224

Construction and Validation of a Protein Prognostic Model for Lung Squamous Cell Carcinoma
Cited by: 5
Author(s): Xisheng Fang, Xia Liu, Chengyin Weng, Yong Wu, Baoxiu Li, Haibo Mao, Mingyu Guan, Lin Lü, Guolong Liu
Software Mentions: 7
Published: almost 5 years ago

10.3389/fgene.2021.722992

A Coagulation-Related Gene-Based Prognostic Model for Invasive Ductal Carcinoma
Cited by: 11
Author(s): Jing Li, Jiang Du, Yanhong Wang, Hong-Ti Jia
Software Mentions: 7
Published: about 3 years ago

10.3389/fonc.2020.538133

Behavior-Oriented Nomogram for the Stratification of Lower-Grade Gliomas to Improve Individualized Treatment
Cited by: 6
Author(s): Ruo-Lun Wei, Liwei Zhang, Jianguo Li, Fengdong Yang, Yue Xue, Xinting Wei
Software Mentions: 7
Published: almost 4 years ago

10.1007/s11605-020-04836-8

Endoscopic Resection Without Subsequent Ablation Therapy for Early Barrett’s Neoplasia: Endoscopic Findings and Long-Term Mortality
Cited by: 7
Author(s): Sanne N. van Munster, Esther Nieuwenhuis, Bas L. Weusten, Lorenza Alvarez Herrero, Auke Bogte, A. Alkhalaf, B.E. Schenk, Erik J. Schoon, Wouter L. Curvers, Arjun D. Koch, Steffi Elisabeth Maria van de Ven, P.J.F. de Jonge, Thjon J. Tang, WB Nagengast, Frans Peters, Jessie Westerhof, Martin H. Houben, Jacques Bergman, Roos E. Pouw
Software Mentions: 7
Published: about 4 years ago

10.1155/2021/8323487

LncRNA ELF3-AS1 is a Prognostic Biomarker and Correlated with Immune Infiltrates in Hepatocellular Carcinoma
Cited by: 14
Author(s): Tianming Chen, Changhao Zhu, Xing Wang, Yaozhen Pan
Software Mentions: 7
Published: over 3 years ago

10.3389/fgene.2020.00524

Detecting Prognosis Risk Biomarkers for Colon Cancer Through Multi-Omics-Based Prognostic Analysis and Target Regulation Simulation Modeling
Cited by: 19
Author(s): Zuojing Yin, Xinmiao Yan, Qiming Wang, Zeliang Deng, Kailin Tang, Zhiwei Cao, Tianyi Qiu
Software Mentions: 7
Published: over 4 years ago

10.1186/s13046-021-01938-2

Chemotherapy-induced CDA expression renders resistant non-small cell lung cancer cells sensitive to 5′-deoxy-5-fluorocytidine (5′-DFCR)
Cited by: 7
Author(s): Yanyun Gao, Philipp Zens, Min Su, Camila Anna Gemperli, Haitang Yang, Haibin Deng, Yang Zhang, Duo Xu, Sean Hall, Sabina Berezowska, Patrick Dorn, Ren‐Wang Peng, Ralph A. Schmid, Wenxiang Wang, Thomas Marti
Software Mentions: 7
Published: over 3 years ago

10.1093/jncics/pkab026

Histopathological Growth Patterns and Survival After Resection of Colorectal Liver Metastasis: An External Validation Study
Cited by: 24
Author(s): Diederik J. Höppener, Boris Galjart, Pieter M. H. Nierop, Florian E. Buisman, Eric P. van der Stok, Robert R.J. Coebergh van den Braak, Martin J. van Amerongen, Vinod P. Balachandran, William R. Jarnagin, T. Peter Kingham, Michail Doukas, Jinru Shia, Irıs D. Nagtegaal, Peter B. Vermeulen, Bas Groot Koerkamp, Dirk J. Grünhagen, Johannes H. W. de Wilt, Michael I. D’Angelica, Cornelis Verhoef
Software Mentions: 7
Published: over 3 years ago

10.1186/s13058-020-01379-3

Acquired mutations and transcriptional remodeling in long-term estrogen-deprived locoregional breast cancer recurrences
Cited by: 19
Author(s): Nolan Priedigkeit, Kai Ding, William Horne, Jay K. Kolls, Tian Du, Peter C. Lucas, Jens-Uwe Blohmer, Carsten Denkert, A Machleidt, Barbara Ingold-Heppner, Steffi Oesterreich, Adrian V. Lee
Software Mentions: 7
Published: almost 4 years ago

10.3389/fgene.2020.00899

Identification of a Five-Gene Signature for Predicting Survival in Malignant Pleural Mesothelioma Patients
Cited by: 6
Author(s): Yi-Yang Bai, Wang Xiao, Jie Hou, Luying Geng, Xuan Liang, Zhiping Ruan, Hui Guo, Nan Kang, Lili Jiang
Software Mentions: 7
Published: over 4 years ago

10.18632/aging.103999

CCL5-dependent mast cell infiltration into the tumor microenvironment in clear cell renal cell carcinoma patients
Cited by: 12
Author(s): Tianjie Liu, Qing Xia, Haibao Zhang, Zixi Wang, Wenjie Yang, Xiao Gu, Tao Hou, Yule Chen, Xinqi Pei, Guodong Zhu, Dalin He, Lei Li, Shan Xu
Software Mentions: 7
Published: about 4 years ago

10.18632/aging.103779

Development and validation of an immune and stromal prognostic signature in uveal melanoma to guide clinical therapy
Cited by: 5
Author(s): Qianwen Gong, Qi Wan, Anqi Li, Yubin Yu, Xiangyu Ding, Lin Leng, Xiao-Liang Qi, Liang Hu
Software Mentions: 7
Published: about 4 years ago

10.3389/fgene.2021.732211

A Ferroptosis-Related Prognostic Signature Based on Antitumor Immunity and Tumor Protein p53 Mutation Exploration for Guiding Treatment in Patients With Head and Neck Squamous Cell Carcinoma
Cited by: 13
Author(s): Xin Fan, YangShaobo Ou, Huijie Liu, Liangzhen Zhan, Xiaohui Zhu, Mingyang Cheng, Qun Li, Dongmei Yin, Lan Liao
Software Mentions: 7
Published: about 3 years ago

10.1042/BSR20203496

Screening of immunosuppressive cells from colorectal adenocarcinoma and identification of prognostic markers
Cited by: 5
Author(s): Fazhan Li, Jun Zhou, Zedong Li, Leiyi Zhang
Software Mentions: 7
Published: over 3 years ago

10.3389/fonc.2021.733595

Identification of Glycolysis-Related lncRNAs and the Novel lncRNA WAC-AS1 Promotes Glycolysis and Tumor Progression in Hepatocellular Carcinoma
Cited by: 22
Author(s): Xigang Xia, Hao Zhang, Peng Xia, Yu Zhu, Jie Liu, Kequan Xu, Yufeng Yuan
Software Mentions: 7
Published: about 3 years ago

10.1136/jitc-2021-002467

Tumor microenvironment evaluation promotes precise checkpoint immunotherapy of advanced gastric cancer
Cited by: 75
Author(s): Dongqiang Zeng, Jiani Wu, Hongyu Luo, Yong Li, Jian Xiao, Jianjun Peng, Zilan Ye, Rui Zhou, Yunfang Yu, Gaofeng Wang, Na Huang, Jianhua Wu, Xiaoxiang Rong, Li Sun, Huiying Sun, Wenjun Qiu, Yuting Xue, Jianping Bin, Yulin Liao, Li N, Min Shi, Kyoung‐Mee Kim, Wangjun Liao
Software Mentions: 7
Published: over 3 years ago

10.3389/fonc.2021.618187

CCR4, CCR8, and P2RY14 as Prognostic Factors in Head and Neck Squamous Cell Carcinoma Are Involved in the Remodeling of the Tumor Microenvironment
Cited by: 9
Author(s): Liangliang Meng, Xiaoxi He, Hong Qin, Bo Qiao, Xiao Zhang, Bin Wu, Xiaobo Zhang, Yingtian Wei, Jing Li, Zhaoxiang Ye, Yueyong Xiao
Software Mentions: 7
Published: over 3 years ago

10.3389/fgene.2021.635863

Identification and Validation of a Novel DNA Damage and DNA Repair Related Genes Based Signature for Colon Cancer Prognosis
Cited by: 16
Author(s): Xuequan Wang, Shiwen Xu, Wei Wang, Shang Guo Piao, Xin-Li Mao, Xian-Bin Zhou, Yi Wang, Weidan Wu, Liping Ye, Shaowei Li
Software Mentions: 7
Published: over 3 years ago

10.1038/s41598-021-88177-9

A three-feature prediction model for metastasis-free survival after surgery of localized clear cell renal cell carcinoma
Cited by: 7
Author(s): Kalle Mattila, Teemu D. Laajala, Sara Tornberg, Tuomas P. Kilpeläinen, Paula Vainio, Otto Ettala, Peter J. Boström, Harry Nísen, Laura L. Elo, Panu M. Jaakkola
Software Mentions: 7
Published: over 3 years ago

10.3389/fonc.2021.698278

A Focal Adhesion-Related Gene Signature Predicts Prognosis in Glioma and Correlates With Radiation Response and Immune Microenvironment
Cited by: 7
Author(s): Haonan Li, Guohui Wang, Wenyan Wang, Jie Pan, Huandi Zhou, Xuetao Han, Linlin Su, Zhenghui Ma, Liubing Hou, Xiaoying Xue
Software Mentions: 7
Published: about 3 years ago

10.3389/fgene.2021.678780

Identification of a Four-Gene Signature With Prognostic Significance in Endometrial Cancer Using Weighted-Gene Correlation Network Analysis
Cited by: 7
Author(s): Shijin Huang, Lihong Pang, Changqiang Wei
Software Mentions: 7
Published: about 3 years ago

10.1186/s12915-020-00910-4

Deconvolution of cellular subsets in human tissue based on targeted DNA methylation analysis at individual CpG sites
Cited by: 24
Author(s): Marco F. Schmidt, Tiago Maié, Edgar Dahl, Ivan G. Costa, Wolfgang Wagner
Software Mentions: 7
Published: almost 4 years ago

10.1038/s41598-020-69082-z

Immune expression signatures as candidate prognostic biomarkers of age and gender survival differences in cutaneous melanoma
Cited by: 6
Author(s): Yi Jun Kim, Kyubo Kim, Kye Hwa Lee, Jiyoung Kim, Wonguen Jung
Software Mentions: 7
Published: over 4 years ago

10.3389/fgene.2021.739470

Construction on of a Ferroptosis-Related lncRNA-Based Model to Improve the Prognostic Evaluation of Gastric Cancer Patients Based on Bioinformatics
Cited by: 19
Author(s): Jing Pan, Xinyue Zhang, Xuedong Fang, Zhuoyuan Xin
Software Mentions: 7
Published: about 3 years ago

10.3389/fgene.2020.00012

Identification and Validation of an Individualized Prognostic Signature of Bladder Cancer Based on Seven Immune Related Genes
Cited by: 61
Author(s): Huaide Qiu, Xiaorong Hu, Chuan He, Bin Yu, Yongqiang Li, Jianan Li
Software Mentions: 7
Published: almost 5 years ago

10.18632/aging.202982

Prognostic value of members of NFAT family for pan-cancer and a prediction model based on NFAT2 in bladder cancer
Cited by: 4
Author(s): Zhou-Tong Dai, Xiang Yuan, Yundan Wang, Lidao Bao, Jun Wang, Jiapeng Li, Huimin Zhang, Zhongxin Lu, Sreenivasan Ponnambalam, Xing–Hua Liao
Software Mentions: 7
Published: over 3 years ago

10.1155/2020/7147824

Construction of Protein-related Risk Score Model in Bladder Urothelial Carcinoma
Cited by: 5
Author(s): Qizhan Luo, Xiaobo Zhang
Software Mentions: 7
Published: over 4 years ago

10.3390/cancers13164087

Prognostic Value of Procalcitonin, C-Reactive Protein, and Lactate Levels in Emergency Evaluation of Cancer Patients with Suspected Infection
Cited by: 5
Author(s): Patrick Chaftari, Aiham Qdaisat, Anne-Marie Chaftari, Julian Maamari, Ziyi Li, Florea Lupu, Issam Raad, Ray Hachem, George A. Calin, Sai Ching Jim Yeung
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0253277

Dogs fail to reciprocate the receipt of food from a human in a food-giving task
Cited by: 1
Author(s): Jim McGetrick, Lisa Poncet, Marietta Amann, Johannes Schullern-Schrattenhofen, Leona Fux, Mayte Martínez, Friederike Range
Software Mentions: 7
Published: over 3 years ago

10.1186/s12957-021-02364-6

Effect of surgery on survival in patients with stage III N2 small cell lung cancer: propensity score matching analysis and nomogram development and validation
Cited by: 6
Author(s): Yanfei Chai, Yuchao Ma, Wei Feng, Hongwei Lü, Longyu Jin
Software Mentions: 7
Published: about 3 years ago

10.1038/s41598-020-72801-1

Severity assessment in mice subjected to carbon tetrachloride
Cited by: 13
Author(s): Lisa Ernst, Leonie Zieglowski, M Schulz, Michaela Moss, M. Meyer, Ralf Weiskirchen, Rupert Palme, Melanie Hamann, Steven R. Talbot, René Tolba
Software Mentions: 7
Published: about 4 years ago

10.1038/s41598-020-77578-x

Empty mesoporous silica particles significantly delay disease progression and extend survival in a mouse model of ALS
Cited by: 7
Author(s): Marcel F. Leyton-Jaimes, Patrik Ivert, Jan Hoeber, Yilin Han, Adam Feiler, Chunfang Zhou, Stanislava Pankratova, Varda Shoshan‐Barmatz, Adrian Israelson, Elena N. Kozlova
Software Mentions: 7
Published: almost 4 years ago

10.1155/2020/2837906

Integrative Analysis of Three Novel Competing Endogenous RNA Biomarkers with a Prognostic Value in Lung Adenocarcinoma
Cited by: 7
Author(s): Juan Tan, Weimin Wang, Bin Song, Yawei Song, Zili Meng
Software Mentions: 7
Published: over 4 years ago

10.1038/s41598-018-32721-7

Termites shape their collective behavioural response based on stage of infection
Cited by: 41
Author(s): Hannah E. Davis, Stefania Meconcelli, Renate Radek, Dino P. McMahon
Software Mentions: 7
Published: about 6 years ago

10.3389/fcell.2021.618313

Long Non-coding RNA Expression Patterns in Stomach Adenocarcinoma Serve as an Indicator of Tumor Mutation Burden and Are Associated With Tumor-Infiltrating Lymphocytes and Microsatellite Instability
Cited by: 6
Author(s): Dongdong Yang, Jianan Yu, Bing Han, Yue Sun, Steven Mo, Jing Hu
Software Mentions: 7
Published: almost 4 years ago

10.1371/journal.pbio.2000532

A fat-derived metabolite regulates a peptidergic feeding circuit in Drosophila
Cited by: 22
Author(s): Dohyoung Kim, Min-Gyoung Shin, Sunghwan Jung, Youngjoon Kim, Walton D. Jones
Software Mentions: 7
Published: over 7 years ago

10.3389/fcell.2021.648279

Prognostic Value of a Novel Signature With Nine Hepatitis C Virus-Induced Genes in Hepatic Cancer by Mining GEO and TCGA Databases
Cited by: 5
Author(s): Jianming Wei, Bo Wang, Xibo Gao, Daqing Sun
Software Mentions: 7
Published: over 3 years ago

10.18632/aging.104116

Integrated analysis of a competing endogenous RNA network reveals an 11-lncRNA prognostic signature in ovarian cancer
Cited by: 3
Author(s): Yongjian Zhang, Hu Zhou, Mei‐Yin Zhang, Linan Xing, Chang Yang, Bairong Xia, Ge Lou
Software Mentions: 7
Published: about 4 years ago

10.15252/msb.20188497

netDx: interpretable patient classification using integrated patient similarity networks
Cited by: 59
Author(s): Shraddha Pai, Shirley Hui, Ruth Isserlin, Manjool Shah, Hussam Kaka, Gary D. Bader
Software Mentions: 7
Published: over 5 years ago

10.1155/2021/6629842

DOCK4 Is a Platinum-Chemosensitive and Prognostic-Related Biomarker in Ovarian Cancer
Cited by: 6
Author(s): Qianqian Zhao, Jie Zhong, Ping Lü, Xiao Feng, Ying Han, Chenqi Ling, Wenxiu Guo, Weijin Zhou, Fudong Yu
Software Mentions: 7
Published: almost 4 years ago

10.3389/fonc.2021.566492

MicroRNA-935 Directly Targets FZD6 to Inhibit the Proliferation of Human Glioblastoma and Correlate to Glioma Malignancy and Prognosis
Cited by: 9
Author(s): Dainan Zhang, Shunchang Ma, Chuanbao Zhang, Peiliang Li, Beibei Mao, Xiudong Guan, Wenqiang Zhou, Jiayi Peng, Xi Wang, Shaomin Li, Wang Jia
Software Mentions: 7
Published: over 3 years ago

10.3389/fonc.2020.01214

The Significance of the CLDN18-ARHGAP Fusion Gene in Gastric Cancer: A Systematic Review and Meta-Analysis
Cited by: 19
Author(s): Weihan Zhang, Shouyue Zhang, Qing Hou, Yun Qin, Xin-Zu Chen, Zong‐Guang Zhou, Yang Shu, Hong‐Xi Xu, Jian‐Kun Hu
Software Mentions: 7
Published: about 4 years ago

10.3390/jcm10173945

High Central Venous Pressure after Cardiac Surgery Might Depict Hemodynamic Deterioration Associated with Increased Morbidity and Mortality
Cited by: 5
Author(s): Fridtjof Schiefenhövel, Ralf Trauzeddel, Michael Sander, Matthias Heringlake, Heinrich V. Groesdonk, Herko Grubitzsch, Jochen Kruppa, Christian Berger, Sascha Treskatsch, Felix Balzer
Software Mentions: 7
Published: about 3 years ago

10.1371/journal.pone.0230767

The design and implementation of restraint devices for the injection of pathogenic microorganisms into Galleria mellonella
Cited by: 8
Author(s): Lance R. Fredericks, Mark D. Lee, Cooper R. Roslund, Angela Crabtree, Peter B. Allen, Paul A. Rowley
Software Mentions: 7
Published: over 4 years ago

10.3389/fcell.2021.659080

ANXA1 as a Prognostic and Immune Microenvironmental Marker for Gliomas Based on Transcriptomic Analysis and Experimental Validation
Cited by: 8
Author(s): Zhongxiao Lin, Ming‐Shien Wen, Enxing Yu, Xiao Yan Lin, Hua Wang, Jiayu Chen, Chaojie Yao, Hengli Zhang, Junnan Ru, Kankai Wang, Ying Zhang, Lijie Huang, Qichuan Zhuge, Shuxu Yang
Software Mentions: 7
Published: over 3 years ago

10.3389/fonc.2019.00523

Comprehensive Gene Expression Analysis in NMIBC Using RNA-seq Reveals New Therapy Strategies
Cited by: 11
Author(s): Xiaoliang Chen, Fuquan Jiang, Jia Chen, Ming Liu, Yong-Hao Nan, Licheng Qu, Qingkuo Kong, Fangfang Hou, Wenshan Luo, Wanli Na, Xin Jin, Jiufeng Tan
Software Mentions: 7
Published: over 5 years ago

10.3389/fonc.2020.01444

Development and Validation of an m6A RNA Methylation Regulator-Based Signature for Prognostic Prediction in Cervical Squamous Cell Carcinoma
Cited by: 32
Author(s): Jianji Pan, Lichao Xu, Hongda Pan
Software Mentions: 7
Published: over 4 years ago

10.1111/jcmm.15805

Identification of purity and prognosis‐related gene signature by network analysis and survival analysis in brain lower grade glioma
Cited by: 15
Author(s): Zujian Xiong, Yi Xiong, Hongwei Liu, L. Chang, Xuejun Li
Software Mentions: 7
Published: about 4 years ago

10.1038/s41419-021-04015-w

Autophagy-related circRNA evaluation reveals hsa_circ_0001747 as a potential favorable prognostic factor for biochemical recurrence in patients with prostate cancer
Cited by: 16
Author(s): Chuanfan Zhong, Kuan-Hung Wu, Shuo Wang, Zining Long, Taowei Yang, Weibo Zhong, Xiao Tan, Zixian Wang, Chuanyin Li, Jianming Lü, Xiangming Mao
Software Mentions: 7
Published: over 3 years ago

10.1038/s41420-021-00451-x

A novel defined pyroptosis-related gene signature for predicting the prognosis of ovarian cancer
Cited by: 256
Author(s): Ying Yang, Qinjin Dai, Hongbo Qi
Software Mentions: 7
Published: over 3 years ago

10.3390/microorganisms9040871

The Gut Microbiota Can Provide Viral Tolerance in the Honey Bee
Cited by: 36
Author(s): Christopher Dosch, Anja Manigk, Tabea Streicher, Anja Tehel, Robert J. Paxton, Simon Tragust
Software Mentions: 7
Published: over 3 years ago

10.7717/peerj.11968

Development and validation of a novel survival model for acute myeloid leukemia based on autophagy-related genes
Cited by: 7
Author(s): Li Huang, Lier Lin, Xing Fu, Can Meng
Software Mentions: 7
Published: over 3 years ago

10.1111/jcmm.16395

STAT1 is a key gene in a gene regulatory network related to immune phenotypes in bladder cancer: An integrative analysis of multi‐omics data
Cited by: 1
Author(s): Hong Weng, Shuai Yuan, Qiao Huang, Xian‐Tao Zeng, Xinghuan Wang
Software Mentions: 7
Published: almost 4 years ago

10.7717/peerj.11733

Identification of a circadian gene signature that predicts overall survival in lung adenocarcinoma
Cited by: 2
Author(s): Xinliang Gao, Mingbo Tang, Suyan Tian, Jialin Li, Wei Liu
Software Mentions: 7
Published: over 3 years ago

10.1111/jcmm.16321

Characterization of an endoplasmic reticulum stress‐related signature to evaluate immune features and predict prognosis in glioma
Cited by: 29
Author(s): Qing Zhang, Gefei Guan, Cheng Peng, Wen Cheng, Lianhe Yang, Anhua Wu
Software Mentions: 7
Published: over 3 years ago

10.3389/fcell.2021.673838

Construction of a Promising Tumor-Infiltrating CD8+ T Cells Gene Signature to Improve Prediction of the Prognosis and Immune Response of Uveal Melanoma
Cited by: 13
Author(s): Yifang Sun, Jian Wu, Yuchao Yuan, Yumin Lu, Ming Luo, Ling Lin, Shuping Ma
Software Mentions: 7
Published: over 3 years ago

10.3390/cancers13081934

Cannabinoid Receptor Type-2 in B Cells Is Associated with Tumor Immunity in Melanoma
Cited by: 3
Author(s): Thomas Gruber, Steve Robatel, Mirela Kremenovic, Lukas Bäriswyl, Jürg Gertsch, Mirjam Schenk
Software Mentions: 7
Published: over 3 years ago

10.3389/fmolb.2021.624951

Metabolism-Relevant Molecular Classification Identifies Tumor Immune Microenvironment Characterization and Immunotherapeutic Effect in Cervical Cancer
Cited by: 4
Author(s): Luyi Li, Hui Gao, Danhan Wang, Hao Jiang, Hongzhu Wang, Jiajian Yu, Xin Jiang, Changjiang Huang
Software Mentions: 7
Published: over 3 years ago

10.1016/j.cell.2020.07.017

Therapy-Induced Evolution of Human Lung Cancer Revealed by Single-Cell RNA Sequencing
Cited by: 319
Author(s): Ashley Maynard, Caroline E. McCoach, Julia Rotow, Lincoln Harris, Franziska Haderk, D. Lucas Kerr, Elizabeth A. Yu, Erin L. Schenk, Weilun Tan, Alexander Zee, Michelle Tan, Philippe Gui, Tasha Lea, Wei Wu, Anatoly Urisman, Kirk D. Jones, Rene Sit, Pallav K. Kolli, E. Scott Seeley, Yaron Gesthalter, Daniel Le, Kevin A. Yamauchi, David M. Naeger, Sourav Bandyopadhyay, Khyati N. Shah, Lauren Cech, Norman Thomas, Anshal Gupta, Mayra A. Gonzalez, Hien Do, Lisa Tan, Bianca Bacaltos, Rafael Gómez-Sjöberg, Matthew A. Gubens, Thierry Jahan, Johannes R. Kratz, David M. Jablons, Norma Neff, Robert C. Doebele, Jonathan S. Weissman, Collin M. Blakely, Spyros Darmanis, Trever G. Bivona
Software Mentions: 7
Published: about 4 years ago

10.7717/peerj.11430

Identification of Vitamin D-related gene signature to predict colorectal cancer prognosis
Cited by: 1
Author(s): Luping Bu, Fengxing Huang, Mengting Li, Yanan Peng, Haizhou Wang, Meng Zhang, Linfa Peng, Lan Liu, Qiu Zhao
Software Mentions: 7
Published: over 3 years ago

10.3389/fcell.2021.658642

HNRNPA2B1 Affects the Prognosis of Esophageal Cancer by Regulating the miR-17-92 Cluster
Cited by: 21
Author(s): Kexin Li, Jiongyu Chen, Xiaoying Lou, Yiling Li, Benheng Qian, Danfei Xu, Yue Wu, Shaohui Ma, Donghong Zhang, Wei Cui
Software Mentions: 7
Published: over 3 years ago

10.3389/fcell.2021.637400

Integrated Bioinformatical Analysis Identifies GIMAP4 as an Immune-Related Prognostic Biomarker Associated With Remodeling in Cervical Cancer Tumor Microenvironment
Cited by: 16
Author(s): Fangfang Xu, Jiacheng Shen, Shaohua Xu
Software Mentions: 7
Published: almost 4 years ago

10.3389/fmolb.2020.00053

Intrinsic Genetic and Transcriptomic Patterns Reflect Tumor Immune Subtypes Facilitating Exploring Possible Combinatory Therapy
Cited by: 1
Author(s): Yong Xu, Daixi Li, Zhenhao Liu, David L. Gibbs, Lu Xie, Guangrong Qin
Software Mentions: 7
Published: over 4 years ago

10.3389/fonc.2021.585808

Prognostic Value of Lymph Node Dissection for Intrahepatic Cholangiocarcinoma Patients With Clinically Negative Lymph Node Metastasis: A Multi-Center Study From China
Cited by: 12
Author(s): Qiao Ke, Lei Wang, Zongming Lin, Jianying Lou, Shi Zheng, Xinyu Bi, Jianming Wang, Wei Guo, Fuyu Li, Jian Wang, Yang Zheng, Jingdong Li, Sheue-yann Cheng, Weiping Zhou, Yongyi Zeng
Software Mentions: 7
Published: over 3 years ago

10.1371/journal.pone.0236142

Diet flexibility and growth of the early herbivorous juvenile crown-of-thorns sea star, implications for its boom-bust population dynamics
Cited by: 17
Author(s): Dione J. Deaker, Benjamin Mos, Huang-An Lin, Corinne Lawson, Claire Budden, Symon A. Dworjanyn, Maria Byrne
Software Mentions: 7
Published: over 4 years ago

10.1038/s41598-019-43758-7

In silico prediction of housekeeping long intergenic non-coding RNAs reveals HKlincR1 as an essential player in lung cancer cell survival
Cited by: 2
Author(s): Danish Memon, Jing Bi, Crispin Miller
Software Mentions: 7
Published: over 5 years ago

10.3390/cancers13071730

Identification and Validation of an Immune-Associated RNA-Binding Proteins Signature to Predict Clinical Outcomes and Therapeutic Responses in Glioma Patients
Cited by: 11
Author(s): Ruotong Tian, Yimin Li, Qian Liu, Minfeng Shu
Software Mentions: 7
Published: over 3 years ago

10.1001/jamanetworkopen.2020.0094

Longitudinal Maintenance of Cognitive Health in Centenarians in the 100-plus Study
Cited by: 23
Author(s): Nina Beker, Sietske A.M. Sikkes, Marc Hulsman, Niccolò Tesi, Sven J. van der Lee, Philip Scheltens, Henne Holstege
Software Mentions: 7
Published: over 4 years ago

10.1002/cam4.3447

Methylome analyses of three glioblastoma cohorts reveal chemotherapy sensitivity markers within DDR genes
Cited by: 13
Author(s): Tobias Keßler, Anne Berberich, Ahmed Sadik, Felix Sahm, Thierry Gorlia, Christoph Meisner, Dirk C. Hoffmann, Antje Wick, Philipp Kickingereder, Petra Rübmann, Martin Bendszus, Christiane A. Opitz, Michael Weller, Martin van den Bent, Roger Stupp, Frank Winkler, Alba Ariela Brandes, Andreas von Deimling, Michael Platten, Wolfgang Wick
Software Mentions: 7
Published: about 4 years ago

10.1002/cam4.4189

Predicting the immune landscape of invasive breast carcinoma based on the novel signature of immune‐related lncRNA
Cited by: 7
Author(s): Shuang Shen, Xin Chen, Xiaochi Hu, Jinlong Huo, Libo Luo, Xuezhi Zhou
Software Mentions: 7
Published: over 3 years ago

10.18632/aging.202278

Identification of long non-coding RNA signatures for squamous cell carcinomas and adenocarcinomas
Cited by: 0
Author(s): Suyan Tian, Mingbo Tang, Jialin Li, Chi Wang, Wei Liu
Software Mentions: 7
Published: almost 4 years ago

10.3390/insects12020089

Direct and Indirect Effect via Endophytism of Entomopathogenic Fungi on the Fitness of Myzus persicae and Its Ability to Spread PLRV on Tobacco
Cited by: 3
Author(s): Junior Corneille Fingu Mabola, Thomas Bawin, Frédéric Francis
Software Mentions: 7
Published: almost 4 years ago

10.1016/j.jbc.2021.100593

PIM-induced phosphorylation of Notch3 promotes breast cancer tumorigenicity in a CSL-independent fashion
Cited by: 8
Author(s): Sebastian K.-J. Landor, Niina M. Santio, William Eccleshall, Valeriy M. Paramonov, Ellen K. Gagliani, Daniel Hall, Shao Bo Jin, Käthe M. Dahlström, Tiina A. Salminen, Adolfo Rivero-Müller, Urban Lendahl, Rhett A. Kovall, Päivi J. Koskinen, Cecilia Sahlgren
Software Mentions: 7
Published: almost 4 years ago

10.3389/fvets.2019.00374

The Effect of Abnormal Reproductive Tract Discharge on the Calving to Conception Interval of Dairy Cows
Cited by: 5
Author(s): Madeleine J. Hay, Allan Gunn, Ángel Abuelo, Victoria Brookes
Software Mentions: 7
Published: about 5 years ago

10.3389/fphar.2021.688528

Explore the Usefulness of Concurrent Chemotherapy in Stage II Nasopharyngeal Carcinoma: A Retrospective Study
Cited by: 3
Author(s): Peijing Li, YuLin Lai, Fang He, Yuan-Yuan Chen, Zhuo‐Sheng Gu, Wei Luo, Qun Zhang
Software Mentions: 7
Published: about 3 years ago

10.3389/fimmu.2021.672158

Analysis of Tumor Microenvironment Characteristics in Bladder Cancer: Implications for Immune Checkpoint Inhibitor Therapy
Cited by: 21
Author(s): Xingyu Chen, Haotian Chen, Dong He, Ying Cheng, Yuxing Zhu, Mengqing Xiao, Hua Lan, Zhanwang Wang, Ke Cao
Software Mentions: 7
Published: over 3 years ago

10.18632/aging.202269

Immune profile of the tumor microenvironment and the identification of a four-gene signature for lung adenocarcinoma
Cited by: 15
Author(s): Tao Fan, Mark Zhu, Li-Yu Wang, Yu Liu, He Tian, Zheng Yang, Fengwei Tan, Nan Sun, Chunxiang Li, Jie He
Software Mentions: 7
Published: almost 4 years ago

10.3389/fbioe.2020.00592

Immune and Clinical Features of CD96 Expression in Glioma by in silico Analysis
Cited by: 21
Author(s): Qiang Zhang, Hua Zhong, Yinchun Fan, Qian Liu, Jiancheng Song, Shengtao Yao, Fang Cao
Software Mentions: 7
Published: over 4 years ago

10.3389/fimmu.2021.645320

Effects of Hypoxia in Intestinal Tumors on Immune Cell Behavior in the Tumor Microenvironment
Cited by: 14
Author(s): Luping Zhang, Shaokun Wang, Yachen Wang, Wenjie Zhao, Yingli Zhang, Nan Zhang, Hong Xu
Software Mentions: 7
Published: over 3 years ago

10.3389/fimmu.2021.653836

Identification of Prognostic Genes in the Tumor Microenvironment of Hepatocellular Carcinoma
Cited by: 41
Author(s): Shixin Xiang, Jing Li, Jing Shen, Yueshui Zhao, Xu Wu, Mingxing Li, Yang Xiao-mi, Parham Jabbarzadeh Kaboli, Fukuan Du, Yan Zheng, Qinglian Wen, Chi Hin Cho, Tao Yi, Zhangang Xiao
Software Mentions: 7
Published: over 3 years ago

10.1186/s12902-021-00732-7

Incidence and prognostic factors of primary thyroid lymphoma and construction of prognostic models for post-chemotherapy and postoperative patients: a population-based study
Cited by: 1
Author(s): Nan Xiang, Fangyuan Dong, Xuebing Zhan, Shuhan Wang, Junjie Wang, Entao Sun, Bing Chen
Software Mentions: 7
Published: over 3 years ago

10.1093/gigascience/giaa162

Lilikoi V2.0: a deep learning–enabled, personalized pathway-based R package for diagnosis and prognosis predictions using metabolomics data
Cited by: 10
Author(s): Xinying Fang, Yu Liu, Zhijie Ren, Yuheng Du, Qizhao Huang, Lana X. Garmire
Software Mentions: 7
Published: almost 4 years ago

10.7150/jca.43805

Survival Risk Prediction Models of Gliomas Based on IDH and 1p/19q
Cited by: 4
Author(s): Han Zou, L. Chang, Siyi Wanggou, Xuejun Li
Software Mentions: 7
Published: almost 5 years ago

10.1371/journal.pone.0242191

EZH2 is a negative prognostic biomarker associated with immunosuppression in hepatocellular carcinoma
Cited by: 20
Author(s): Baoqiang Guo, Xiaohong Tan, Hong Cen
Software Mentions: 7
Published: about 4 years ago

10.3389/fimmu.2021.709986

Dissecting Tumor Antigens and Immune Subtypes of Glioma to Develop mRNA Vaccine
Cited by: 30
Author(s): Hua Zhong, Shuai Liu, Fang Cao, Yi Zhao, Jianguo Zhou, Feng Tang, Zhaohua Peng, Yangsheng Li, Shen Xu, Chunlin Wang, Guohua Yang, Zhiqiang Li
Software Mentions: 7
Published: about 3 years ago

10.3389/fonc.2021.612588

Pre- and Postoperative Models for Prediction of Recurrence in Non-B, Non-C Hepatocellular Carcinoma
Cited by: 1
Author(s): Kongying Lin, Qizhen Huang, Lei Wang, Jianxing Zeng, Zongren Ding, Hongzhi Liu, Jun Fu, Pengfei Guo, Zhenwei Chen, Yongyi Zeng, Weiping Zhou, Jingfeng Liu
Software Mentions: 7
Published: almost 4 years ago

10.1155/2020/7658342

A Comprehensive Network Pharmacology-Based Strategy to Investigate Multiple Mechanisms of HeChan Tablet on Lung Cancer
Cited by: 6
Author(s): Zhenjie Zhuang, Qianying Chen, Cihui Huang, Junping Wen, Huayi Huang, Zhanhua Liu
Software Mentions: 7
Published: over 4 years ago

Projects: cran: survminer

Papers Mentioning survminer 1,473