Ecosyste.ms: Papers

10.1038/s41598-019-54004-5

An Escherichia coli ST131 pangenome atlas reveals population structure and evolution across 4,071 isolates
Cited by: 61
Author(s): Arun Gonzales Decano, Tim Downing
Software Mentions: 30
Published: almost 5 years ago

10.3390/microorganisms9051094

Global Genomic Analysis of SARS-CoV-2 RNA Dependent RNA Polymerase Evolution and Antiviral Drug Resistance
Cited by: 16
Author(s): Alfredo Mari, Tim Roloff, Madlen Stange, Kirstine Kobberøe Søgaard, Erblin Asllanaj, Gerardo Tauriello, Leila T. Alexander, Michael Schweitzer, Karoline Leuzinger, Alexander Gensch, Aurélien Emmanuel Martinez, Julia Bielicki, Hans Pargger, Martin Siegemund, Christian H. Nickel, Roland Bingisser, Michael Osthoff, Stefano Bassetti, Parham Sendi, Manuel Battegay, Catia Marzolini, Helena M. B. Seth-Smith, Torsten Schwede, Hans H. Hirsch, Adrian Egli
Software Mentions: 27
Published: over 3 years ago

10.7554/eLife.70086

Gaps in global wildlife trade monitoring leave amphibians vulnerable
Cited by: 22
Author(s): Alice C. Hughes, Benjamin Michael Marshall, Colin Thomas Strine
Software Mentions: 23
Published: about 3 years ago

10.7717/peerj.11177

Predicting migration routes for three species of migratory bats using species distribution models
Cited by: 13
Author(s): Jamin G. Wieringa, Bryan C. Carstens, H. Lisle Gibbs
Software Mentions: 16
Published: over 3 years ago

10.1038/s41598-021-81688-5

Fungal diversity and community structure from coastal and barrier island beaches in the United States Gulf of Mexico
Cited by: 14
Author(s): Allison K. Walker, Brent M. Robicheau
Software Mentions: 16
Published: over 3 years ago

10.1371/journal.pone.0136452

Estimating Limit Reference Points for Western Pacific Leatherback Turtles (Dermochelys coriacea) in the U.S. West Coast EEZ
Cited by: 14
Author(s): K. Alexandra Curtis, Jeffrey E. Moore, Scott R. Benson
Software Mentions: 16
Published: about 9 years ago

10.1155/2018/6587049

Data Association Methodology to Improve Spatial Predictions in Alternative Marketing Circuits in Ecuador
Cited by: 1
Author(s): Washington R. Padilla, Juan Francisco Blanco García
Software Mentions: 16
Published: almost 6 years ago

10.1371/journal.pone.0240935

The sockeye salmon genome, transcriptome, and analyses identifying population defining regions of the genome
Cited by: 24
Author(s): Kris A. Christensen, Eric B. Rondeau, David R. Minkley, Dionne Sakhrani, Carlo A. Biagi, Anne-Marie Flores, Ruth E. Withler, Scott A. Pavey, Terry D. Beacham, Theresa Godin, Eric B. Taylor, Michael A. Russello, Robert H. Devlin, Ben F. Koop
Software Mentions: 15
Published: almost 4 years ago

10.1371/journal.pgen.1009110

Unique genetic signatures of local adaptation over space and time for diapause, an ecologically relevant complex trait, in Drosophila melanogaster
Cited by: 45
Author(s): Priscilla A. Erickson, Cory A. Weller, Daniel Song, Alyssa Bangerter, Paul S. Schmidt, Alan O. Bergland
Software Mentions: 15
Published: almost 4 years ago

10.1186/1476-072X-11-41

Displaying R spatial statistics on Google dynamic maps with web applications created by Rwui
Cited by: 2
Author(s): Richard Newton, Andrew Deonarine, Lorenz Wernisch
Software Mentions: 14
Published: over 12 years ago

10.3390/pathogens9100841

Diverse Epidemiology of Leptospira Serovars Notified in New Zealand, 1999–2017
Cited by: 12
Author(s): Shahista Nisa, David A. Wilkinson, Olivia Angelin‐Bonnet, Shevaun Paine, Karen Weber Cullen, Jackie Wight, Michael G Baker, Jackie Benschop
Software Mentions: 14
Published: almost 4 years ago

10.1186/s12864-016-3038-y

A full-body transcriptome and proteome resource for the European common carp
Cited by: 33
Author(s): Iris Kolder, Suzanne J. van der Plas-Duivesteijn, Ge Tan, G.F. Wiegertjes, Maria Forlenza, Arzu Güler, Dmitrii Y. Travin, Minoru Nakao, Tadaaki Moritomo, Ilgiz Irnazarow, Johan T. den Dunnen, Seyed Yahya Anvar, Hans J. Jansen, Ron P. Dirks, Magnus Palmblad, Boris Lenhard, Christiaan V. Henkel, Herman P. Spaink
Software Mentions: 14
Published: about 8 years ago

10.1038/s41598-018-21217-z

Spatially-explicit valuation of coastal wetlands for cyclone mitigation in Australia and China
Cited by: 32
Author(s): Xiaoguang Ouyang, Joe Lee, Rod M. Connolly, Martin J. Kainz
Software Mentions: 13
Published: over 6 years ago

10.3390/microorganisms9071526

Exploring the Individual Bacterial Microbiota of Questing Ixodes ricinus Nymphs
Cited by: 2
Author(s): Aurélien Alafaci, Alexandre Crépin, Sabine Beaubert, Jean‐Marc Berjeaud, Vincent Delafont, Julien Verdon
Software Mentions: 12
Published: about 3 years ago

10.1186/s13071-018-2920-7

Spatial distribution modelling of Culicoides (Diptera: Ceratopogonidae) biting midges, potential vectors of African horse sickness and bluetongue viruses in Senegal
Cited by: 15
Author(s): Maryam Diarra, Moussa Fall, Assane Guèye Fall, Aliou Diop, Renaud Lancelot, Momar Talla Seck, Ignace Rakotoarivony, Xavier Allène, Jérémy Bouyer, Hélène Guis
Software Mentions: 12
Published: over 6 years ago

10.1038/srep26340

Phylogenetic niche conservatism explains an inverse latitudinal diversity gradient in freshwater arthropods
Cited by: 41
Author(s): Jérôme Morinière, Matthew H. Van Dam, Oliver Hawlitschek, Johannes Bergsten, Mariano C. Michat, Lars Hendrich, Ignacio Ribera, Emmanuel F. A. Toussaint, Michael Balke
Software Mentions: 12
Published: over 8 years ago

10.1002/aps3.1227

Open‐source data reveal how collections‐based fungal diversity is sensitive to global change
Cited by: 24
Author(s): Carrie Andrew, Ulf Büntgen, Simon Egli, Béatrice Senn-Irlet, John‐Arvid Grytnes, Jacob Heilmann‐Clausen, Lynne Boddy, Claus Bässler, Alan C. Gange, Einar Heegaard, Klaus Høiland, Paul M. Kirk, Irmgard Krisai‐Greilhuber, Thomas W. Kuyper, Håvard Kauserud
Software Mentions: 12
Published: over 5 years ago

10.1038/s41598-017-17728-w

Enclaves of genetic diversity resisted Inca impacts on population history
Cited by: 28
Author(s): Chiara Barbieri, José R. Sandoval, Jairo Valqui, Aviva Shimelman, Stefan Ziemendorff, Roland Schröder, Martin Geppert, Lutz Roewer, Russell D. Gray, Mark Stoneking, Ricardo Fujita, Paul Heggarty
Software Mentions: 11
Published: almost 7 years ago

10.3389/fvets.2017.00002

Using Machine Learning to Predict Swine Movements within a Regional Program to Improve Control of Infectious Diseases in the US
Cited by: 28
Author(s): Pablo Valdes–Donoso, Kimberly VanderWaal, Lovell S. Jarvis, Spencer Wayne, Andres Pérez
Software Mentions: 11
Published: over 7 years ago

10.1038/s41598-021-94656-w

A global assessment of surveillance methods for dominant malaria vectors
Cited by: 4
Author(s): Bram van de Straat, Tanya L. Russell, Kyran M. Staunton, Marianne Sinka, Thomas R. Burkot
Software Mentions: 11
Published: about 3 years ago

10.1186/s12864-019-6324-7

Identification of genetic loci and candidate genes related to soybean flowering through genome wide association study
Cited by: 9
Author(s): Minmin Li, Ying Liu, Yahan Tao, Chongjing Xu, Xin Li, Xiaoming Zhang, Yingpeng Han, Xue Yang, Jingzhe Sun, Wenbin Li, Dongmei Li, Xue Zhao, Lin Zhao
Software Mentions: 10
Published: almost 5 years ago

10.1371/journal.pone.0238496

Lyme disease and relapsing fever in Mexico: An overview of human and wildlife infections
Cited by: 18
Author(s): Pablo Colunga‐Salas, Sokani Sánchez‐Montes, Patricia Volkow, Adriana Ruíz-Remigio, Ingeborg Becker
Software Mentions: 10
Published: about 4 years ago

10.1186/s40168-019-0647-0

Protist communities are more sensitive to nitrogen fertilization than other microorganisms in diverse agricultural soils
Cited by: 218
Author(s): Zhi Bo Zhao, Ji Zheng He, Stefan Geisen, Han Long, Jun Tao Wang, Ju-Pei Shen, Wen Jun Wei, Yun Fang, Pei Pei Li, Limei Zhang
Software Mentions: 10
Published: over 5 years ago

10.1038/s41598-021-84545-7

Quantitative molecular detection of larval Atlantic herring (Clupea harengus) in stomach contents of Atlantic mackerel (Scomber scombrus) marks regions of predation pressure
Cited by: 11
Author(s): Bridie J. M. Allan, Jessica L. Ray, Maik Tiedemann, Valeriya Komyakova, Frode Vikebø, Katrine Sandnes Skaar, Martina Stiasny, Arild Folkvord, Richard Nash, Erling Kåre Stenevik, Olav Sigurd Kjesbu
Software Mentions: 10
Published: over 3 years ago

10.1371/journal.pbio.3000818

Evolutionary dynamics in the Anthropocene: Life history and intensity of human contact shape antipredator responses
Cited by: 32
Author(s): Benjamin Geffroy, Bastien Sadoul, Breanna J. Putman, Oded Berger‐Tal, László Zsolt Garamszegi, Anders Pape Møller, Daniel T. Blumstein
Software Mentions: 9
Published: almost 4 years ago

10.1186/s12862-019-1406-3

Specificity of resistance and geographic patterns of virulence in a vertebrate host-parasite system
Cited by: 9
Author(s): Agnes Piecyk, Olivia Roth, Martin Kalbe
Software Mentions: 9
Published: over 5 years ago

10.1038/s41598-021-93800-w

Year-round high abundances of the world’s smallest marine vertebrate (Schindleria) in the Red Sea and worldwide associations with lunar phases
Cited by: 4
Author(s): Vanessa Robitzch, Víctor Molina-Valdivia, Jaiber J. Solano‐Iguaran, Mauricio F. Landaeta, Michael L. Berumen
Software Mentions: 9
Published: about 3 years ago

10.1186/s12889-021-10715-x

Assessing critical gaps in COVID-19 testing capacity: the case of delayed results in Ecuador
Cited by: 28
Author(s): Irene Torres, Rachel Sippy, Fernando Sacoto
Software Mentions: 9
Published: over 3 years ago

10.2196/jmir.6815

Characterizing Awareness of Schizophrenia Among Facebook Users by Leveraging Facebook Advertisement Estimates
Cited by: 30
Author(s): Koustuv Saha, Ingmar Weber, Michael L. Birnbaum, Munmun De Choudhury
Software Mentions: 9
Published: over 7 years ago

10.3390/genes11010066

Genome Resolved Biogeography of Mamiellales
Cited by: 19
Author(s): Jade Leconte, L. Felipe Benites, Thomas Vannier, Patrick Wincker, Gwenaël Piganeau, Olivier Jaillon
Software Mentions: 8
Published: over 4 years ago

10.1371/journal.pone.0100553

Macroecological Evidence for Competitive Regional-Scale Interactions between the Two Major Clades of Mammal Carnivores (Feliformia and Caniformia)
Cited by: 14
Author(s): Rasmus Søndergaard Pedersen, Brody Sandel, Jens‐Christian Svenning
Software Mentions: 8
Published: about 10 years ago

10.1186/s12889-021-11772-y

Firearm laws and the network of firearm movement among US states
Cited by: 4
Author(s): Sae Takada, Kristen R. Choi, Shaw Natsui, Altaf Saadi, Liza Buchbinder, Molly C. Easterlin, Frederick J. Zimmerman
Software Mentions: 8
Published: almost 3 years ago

10.3389/fgene.2020.568223

Taxonomic Novelty and Distinctive Genomic Features of Hot Spring Cyanobacteria
Cited by: 32
Author(s): Jaime Alcorta, Tomás Alarcón-Schumacher, Óscar Rivero Salgado, Beatriz Dı́ez
Software Mentions: 8
Published: almost 4 years ago

10.1371/journal.pone.0247476

Small area estimation and childhood obesity surveillance using electronic health records
Cited by: 5
Author(s): Ying‐Qi Zhao, Derek Norton, Larry Hanrahan
Software Mentions: 8
Published: over 3 years ago

10.3390/ijms22105354

Genome-Wide Characterization of WRKY Transcription Factors Revealed Gene Duplication and Diversification in Populations of Wild to Domesticated Barley
Cited by: 7
Author(s): Jinhong Kan, Guang Gao, Qiang He, Qian Gao, Congcong Jiang, Sunny Ahmar, Jun Liu, Jing Zhang, Ping Yang
Software Mentions: 8
Published: over 3 years ago

10.1371/journal.pone.0185487

The fine-scale genetic structure and evolution of the Japanese population
Cited by: 26
Author(s): Fumihiko Takeuchi, Tomohiro Katsuya, Ryosuke Kimura, Toru Nabika, Minoru Isomura, Takayoshi Ohkubo, Yasuharu Tabara, Ken Yamamoto, Mitsuhiro Yokota, Xuanyao Liu, Woei-Yuh Saw, Dolikun Mamatyusupu, Wenjun Yang, Shuhua Xu, Yik-Ying Teo, Norihiro Kato
Software Mentions: 8
Published: almost 7 years ago

10.1002/ece3.5572

Rapid evolution of <i>Medicago polymorpha</i> during invasion shifts interactions with the soybean looper
Cited by: 4
Author(s): Chandra N. Jack, Maren Friesen
Software Mentions: 8
Published: about 5 years ago

10.1371/journal.ppat.1009537

A plasmid locus associated with Klebsiella clinical infections encodes a microbiome-dependent gut fitness factor
Cited by: 17
Author(s): Jay Vornhagen, Christine M. Bassis, S. Ramakrishnan, Robert Hein, Sophia Mason, Yehudit Bergman, Nicole Sunshine, Yunfan Fan, Caitlyn L. Holmes, Winston Timp, Michael C. Schatz, Vincent B. Young, Patricia J. Simner, Michael A. Bachman
Software Mentions: 7
Published: over 3 years ago

10.1186/s12864-021-07544-y

Comparative analysis of chloroplast genomes of cultivars and wild species of sweetpotato (Ipomoea batatas [L.] Lam)
Cited by: 14
Author(s): Shizhuo Xiao, Pao Xu, Yitong Deng, Xiaofeng Dai, Lukuan Zhao, Bettina Heider, An Zhang, Zhiguang Zhou, Qinghe Cao
Software Mentions: 7
Published: over 3 years ago

10.3389/fpsyg.2020.548506

Effect of the Novel Coronavirus Pneumonia Pandemic on Medical Students’ Psychological Stress and Its Influencing Factors
Cited by: 33
Author(s): Ye Wan, Xinxin Ye, Yuanyuan Liu, Qixi Liu, Somayeh Vafaei, Yinghong Gao, Haoyong Yu, Yanyan Zhong, Chenju Zhan
Software Mentions: 7
Published: almost 4 years ago

10.3389/fmicb.2019.02197

Composition of Bacterial and Archaeal Communities in an Alkali-Surfactant-Polyacrylamide-Flooded Oil Reservoir and the Responses of Microcosms to Nutrients
Cited by: 14
Author(s): Peike Gao, Li Yu, Liang Tan, Feifei Guo, Ting Ma
Software Mentions: 7
Published: almost 5 years ago

10.1002/ece3.2851

Community assembly in <i>Nothobranchius</i> annual fishes: Nested patterns, environmental niche and biogeographic history
Cited by: 20
Author(s): Martin Reichard, Michal Janáč, Matěj Polačik, Radim Blažek, Milan Vrtílek
Software Mentions: 7
Published: over 7 years ago

10.1111/mec.13644

Unidirectional diploid–tetraploid introgression among British birch trees with shifting ranges shown by restriction site‐associated markers
Cited by: 68
Author(s): Jasmin Zohren, Nian Wang, Igor Kardailsky, James S. Borrell, Anika Joecker, Richard A. Nichols, Richard J. A. Buggs
Software Mentions: 7
Published: over 8 years ago

10.3897/zookeys.820.27258

Description of Triatoma huehuetenanguensis sp. n., a potential Chagas disease vector (Hemiptera, Reduviidae, Triatominae)
Cited by: 56
Author(s): Raquel Asunción Lima-Cordón, María Carlota Monroy, Lori Stevens, Antonieta Rodas, Gabriela Anaité Rodas, Patricia L. Dorn, Silvia Andrade Justi
Software Mentions: 7
Published: over 5 years ago

10.1186/s12864-018-4673-2

Ginkgo biloba’s footprint of dynamic Pleistocene history dates back only 390,000 years ago
Cited by: 29
Author(s): Nora Hohmann, Eva M. Wolf, Philippe Rigault, Wenbin Zhou, Markus Kiefer, Yunpeng Zhao, Chengxin Fu, Marcus A. Koch
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-020-76231-x

Increased mosquito abundance and species richness in Connecticut, United States 2001–2019
Cited by: 12
Author(s): Tanya A. Petruff, Joseph R. McMillan, John J. Shepard, Theodore G. Andreadis, Philip M. Armstrong
Software Mentions: 7
Published: almost 4 years ago

10.1038/s41598-018-19607-4

Maize chlorotic mottle virus exhibits low divergence between differentiated regional sub-populations
Cited by: 26
Author(s): Luke Braidwood, Diego F. Quito-Avila, Darlene Cabanas, Alberto Bressan, Anne Wangai, David C. Baulcombe
Software Mentions: 7
Published: over 6 years ago

10.3390/microorganisms9071409

Distribution and Diversity of Beauveria in Boreal Forests of Northern European Russia
Cited by: 3
Author(s): И. А. Казарцев, Georgy R. Lednev
Software Mentions: 6
Published: about 3 years ago

10.1371/journal.pone.0231690

Limited evidence for common interannual trends in Baltic Sea summer phytoplankton biomass
Cited by: 8
Author(s): Jennifer R. Griffiths, Sirpa Lehtinen, Sanna Suikkanen, Monika Winder
Software Mentions: 6
Published: over 4 years ago

10.1186/s12862-020-01721-5

Range and niche expansion through multiple interspecific hybridization: a genotyping by sequencing analysis of Cherleria (Caryophyllaceae)
Cited by: 2
Author(s): Abigail J. Moore, Jennifer A. Messick, Joachim W. Kadereit
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pone.0155477

Risk Factors for Seabird Bycatch in a Pelagic Longline Tuna Fishery
Cited by: 30
Author(s): Eric Gilman, Milani Chaloupka, John Peschon, Sarah Ellgen
Software Mentions: 6
Published: over 8 years ago

10.1038/s41598-019-42988-z

Whole genome sequencing reveals the impact of recent artificial selection on red sea bream reared in fish farms
Cited by: 6
Author(s): Bo‐Hye Nam, DongAhn Yoo, Young‐Ok Kim, Jung Youn Park, Younhee Shin, Ga-Hee Shin, Chan-Il Park, Heebal Kim, Woori Kwak
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-021-98550-3

Environment and culture shape both the colour lexicon and the genetics of colour perception
Cited by: 11
Author(s): Mathilde Josserand, Emma Meeussen, Asifa Majid, Dan Dediu
Software Mentions: 6
Published: almost 3 years ago

10.1186/s12889-021-10491-8

An analysis of COVID-19 clusters in India
Cited by: 10
Author(s): Pooja Sengupta, Bhaswati Ganguli, Sugata SenRoy, Amlan Chatterjee
Software Mentions: 6
Published: over 3 years ago

10.3402/gha.v6i0.19266

The contribution of spatial analysis to understanding HIV/TB mortality in children: a structural equation modelling approach
Cited by: 27
Author(s): Eustasius Musenge, Penelope Vounatsou, Mark Collinson, Stephen Tollman, Kathleen Kahn
Software Mentions: 6
Published: over 11 years ago

10.1038/s41396-021-00895-0

Resolving cryptic species complexes in marine protists: phylogenetic haplotype networks meet global DNA metabarcoding datasets
Cited by: 22
Author(s): Danièle De Luca, Roberta Piredda, Diana Sarno, Wiebe H. C. F. Kooistra
Software Mentions: 6
Published: over 3 years ago

10.3390/jof7040249

Improvements in the Resistance of the Banana Species to Fusarium Wilt: A Systematic Review of Methods and Perspectives
Cited by: 15
Author(s): Anelita de Jesus Rocha, Julianna Matos da Silva Soares, Fernanda dos Santos Nascimento, Adriadna Souza Santos, Vanusia Batista de Oliveira Amorim, Cláudia Fortes Ferreira, Fernando Haddad, Janay Almeida dos Santos-Serejo, Édson Perito Amorim
Software Mentions: 6
Published: over 3 years ago

10.1111/eva.12567

Rapid evolution leads to differential population dynamics and top‐down control in resurrected <i>Daphnia</i> populations
Cited by: 14
Author(s): Eyerusalem Goitom, Laurens J. Kilsdonk, Kristien I. Brans, Mieke Jansen, Pieter Lemmens, Luc De Meester
Software Mentions: 6
Published: almost 7 years ago

10.1038/s41598-017-03508-z

Single-stranded RNA viruses infecting the invasive Argentine ant, Linepithema humile
Cited by: 38
Author(s): Monica A. M. Gruber, Meghan Cooling, James W. Baty, K.M. Buckley, Anna Friedlander, Oliver Quinn, Jessica Francis Elizabeth Jane Russell, Alexandra Sébastien, Philip J. Lester
Software Mentions: 6
Published: over 7 years ago

10.1002/ece3.2853

Phylogeny and biogeography of the scaleless scale worm<i>Pisione</i>(Sigalionidae, Annelida)
Cited by: 5
Author(s): Brett C. Gonzalez, H. Cecilie B. Petersen, Maikon Di Domênico, Alejandro Martínez, Maickel Armenteros, Erik García‐Machado, Peter Rask Møller, Katrine Worsaae
Software Mentions: 6
Published: over 7 years ago

10.1371/journal.pone.0148203

A Phylogenomic Approach Based on PCR Target Enrichment and High Throughput Sequencing: Resolving the Diversity within the South American Species of Bartsia L. (Orobanchaceae)
Cited by: 67
Author(s): Simon Uribe‐Convers, Matthew L. Settles, David C. Tank
Software Mentions: 6
Published: over 8 years ago

10.3390/plants10091785

Roots of Apium graveolens and Petroselinum crispum—Insight into Phenolic Status against Toxicity Level of Trace Elements
Cited by: 9
Author(s): Danijela Arsenov, Milan Župunski, Slobodanka Pajević, Ivana Nemeš, Nataša Simin, Abdullah M Alnuqaydan, Malcolm Watson, Abdulaziz A. Aloliqi, Neda Mimica–Dukić
Software Mentions: 6
Published: about 3 years ago

10.1038/s41598-021-85829-8

Nitrogen has a greater influence than phosphorus on the diazotrophic community in two successive crop seasons in Northeast China
Cited by: 4
Author(s): Jing Zhou, Mingchao Ma, Dawei Guan, Xin Jiang, Nianxin Zhang, Fengyue Shu, Yong Kong, Jun Li
Software Mentions: 6
Published: over 3 years ago

10.3389/fphar.2018.00305

Frequency of CYP2D6 Alleles Including Structural Variants in the United States
Cited by: 81
Author(s): Andria L. Del Tredici, Alka Malhotra, Matthew Dedek, Frank G. Espin, Daniel E. Roach, Guang dan Zhu, Joseph R. Voland, Tanya A. Moreno
Software Mentions: 5
Published: over 6 years ago

10.1093/aobpla/plz017

Recent range expansion in Australian hummock grasses (Triodia) inferred using genotyping-by-sequencing
Cited by: 12
Author(s): Benjamin M. Anderson, Kevin R. Thiele, Pauline F. Grierson, Siegfried L. Krauss, Paul Nevill, Ian Small, Xue Zhong, Matthew D. Barrett
Software Mentions: 5
Published: over 5 years ago

10.1186/s12862-021-01856-z

Positive selection on the MHC class II DLA-DQA1 gene in golden jackals (Canis aureus) from their recent expansion range in Europe and its effect on their body mass index
Cited by: 6
Author(s): Milomir Stefanović, Duško Ćirović, Neda Bogdanović, Felix Knauer, Miklós Heltai, László Szabó, József Lanszki, Chavdar Zhelev, Helmut Schaschl, Franz Suchentrunk
Software Mentions: 5
Published: over 3 years ago

10.1186/s12863-020-0821-1

Genotype-by-environment interaction in coast redwood outside natural distribution - search for environmental cues
Cited by: 6
Author(s): Jaroslav Klápště, Dean F. Meason, Heidi S. Dungey, Emily Telfer, Paul Silcock, Simon Rapley
Software Mentions: 5
Published: over 4 years ago

10.1186/s12889-021-10433-4

A French multicentric prospective prognostic cohort with epidemiological, clinical, biological and treatment information to improve knowledge on lymphoma patients: study protocol of the “REal world dAta in LYmphoma and survival in adults” (REALYSA) cohort
Cited by: 7
Author(s): Hervé Ghesquières, Cédric Rossi, Fanny Cherblanc, Sandra Le Guyader-Peyrou, Fontanet Bijou, Pierre Sujobert, Pascale Fabbro-Pèray, Adeline Bernier, Alexandre Belot, Loïc Chartier, Luc‐Matthieu Fornecker, Isabelle Baldi, Krimo Bouabdallah, Camille Laurent, Lucie Obéric, Nadine Morineau, Steven Le Gouill, Franck Morschhauser, Corinne Haı̈oun, Gandhi Damaj, Stéphanie Guidez, Gaëlle Labouré, Olivier Fitoussi, Laure Lebras, Rémy Gressin, Gilles Salles, Loïc Ysebaert, Alain Monnereau
Software Mentions: 5
Published: over 3 years ago

10.1590/0074-02760180598

Novel molecular evidence of population structure in Anopheles (Kerteszia) bellator from Brazilian Atlantic Forest
Cited by: 1
Author(s): Kamila Voges, Marcela Possato Correa da Rosa, Betina Westphal-Ferreira, Mário Antônio Navarro-Silva, Carime Lessa Mansur Pontes, André Nóbrega Pitaluga, Carlos José de Carvalho-Pinto, Luísa D P Rona
Software Mentions: 5
Published: over 5 years ago

10.3390/v11080694

Prediction of the Spatial Origin of Puumala Virus Infections Using L Segment Sequences Derived from a Generic Screening PCR
Cited by: 6
Author(s): Sabrina Weiß, Boris Klempa, Beate Tenner, Detlev H. Krüger, Jörg Hofmann
Software Mentions: 5
Published: about 5 years ago

10.7717/peerj.7410

Global distribution and diversity of <i>Chaetoceros</i> (Bacillariophyta, Mediophyceae): integration of classical and novel strategies
Cited by: 29
Author(s): Danièle De Luca, Wiebe H. C. F. Kooistra, Diana Sarno, Chetan C. Gaonkar, Roberta Piredda
Software Mentions: 5
Published: about 5 years ago

10.1111/pbi.13446

Genomic analyses reveal the genetic basis of early maturity and identification of loci and candidate genes in upland cotton (<i>Gossypium hirsutum</i> L.)
Cited by: 35
Author(s): Libei Li, Chi Zhang, Jianqin Huang, Qibao Liu, Hengling Wei, Hantao Wang, Guoyuan Liu, Lijiao Gu, Shuang Yu
Software Mentions: 5
Published: about 4 years ago

10.1371/journal.pgen.1003460

Continent-Wide Decoupling of Y-Chromosomal Genetic Variation from Language and Geography in Native South Americans
Cited by: 91
Author(s): Lutz Roewer, Michael Nothnagel, Leonor Gusmão, Verónica Gomes, Miguel González, Daniel Corach, Andrea Sala, Evguenia Alechine, Teresinha de Jesus Brabo Ferreira Palha, Ney Pereira Carneiro dos Santos, Ândrea Ribeiro-dos-Santos, Martin Geppert, Sascha Willuweit, Marion Nagy, Sarah Zweynert, Miriam Baeta, Carolina Núñez, Begoña Martı́nez-Jarreta, Fabricio González-Andrade, E.F. Carvalho, Dayse A. Silva, J.J. Builes, Daniel Turbón, A.M. López-Parra, Eduardo Arroyo-Pardo, Ulises Toscanini, Lisbeth Borjas, Claudia Barletta-Carrillo, Elizabeth Ewart, Sidney Emanuel Batista dos Santos, Michael Krawczak
Software Mentions: 5
Published: over 11 years ago

10.1371/journal.pmed.1003076

Comprehensive infectious disease screening in a cohort of unaccompanied refugee minors in Germany from 2016 to 2017: A cross-sectional study
Cited by: 18
Author(s): Aleš Janda, Kristin Eder, Roland Fressle, Anne Geweniger, Natalie Diffloth, Maximilian Heeg, Nadine Binder, Ana-Gabriela Sitaru, Jan Rohr, Philipp Henneke, Markus Hufnagel, Roland Elling
Software Mentions: 5
Published: over 4 years ago

10.1371/journal.pone.0238334

Genetic diversity of maize landraces from the South-West of France
Cited by: 7
Author(s): Yacine Diaw, Christine Tollon‐Cordet, Alain Charcosset, Stéphane Nicolas, Delphine Madur, Joëlle Ronfort, Jacques David, Brigitte Gouesnard
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0200557

Positive association between moderate altitude and chronic lower respiratory disease mortality in United States counties
Cited by: 8
Author(s): Jae Cheol Hwang, Miso Jang, Namkug Kim, Seunghyun Choi, Yeon‐Mok Oh, Joon Beom Seo
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pone.0226179

Analysis of genome-wide DNA arrays reveals the genomic population structure and diversity in autochthonous Greek goat breeds
Cited by: 13
Author(s): Sofia Michailidou, George Th. Tsangaris, Athina Tzora, Ioannis Skoufos, Georgios Banos, Anagnostis Argiriou, G. Arsenos
Software Mentions: 5
Published: almost 5 years ago

10.1089/fpd.2017.2411

Are Food Animals Responsible for Transfer of Antimicrobial-Resistant<i>Escherichia coli</i>or Their Resistance Determinants to Human Populations? A Systematic Review
Cited by: 109
Author(s): Dishon Muloi, Melissa J. Ward, Amy B. Pedersen, Eric M. Fèvre, Mark Woolhouse, Bram A. D. van Bunnik
Software Mentions: 5
Published: about 6 years ago

10.3389/fgene.2020.518949

tRNA Fragments Populations Analysis in Mutants Affecting tRNAs Processing and tRNA Methylation
Cited by: 20
Author(s): Anahi Mollà-Herman, Margarita Angelova, Maud Ginestet, Clément Carré, Christophe Antoniewski, Jean‐René Huynh
Software Mentions: 5
Published: almost 4 years ago

10.3402/gha.v9.31500

Effect modification in the temperature extremes by mortality subgroups among the tropical cities of the Philippines
Cited by: 16
Author(s): Xerxes Seposo, Trần Ngọc Đăng, Yasushi Honda
Software Mentions: 5
Published: about 8 years ago

10.3390/insects10020040

Fluorescent Pan Traps Affect the Capture Rate of Insect Orders in Different Ways
Cited by: 24
Author(s): Mani Shrestha, Jair E. Garcia, Justin H. J. Chua, Scarlett R. Howard, Thomas Tscheulin, Alan Dorin, Anders Nielsen, Adrian G. Dyer
Software Mentions: 5
Published: over 5 years ago

10.1038/srep20174

Spatial isolation and environmental factors drive distinct bacterial and archaeal communities in different types of petroleum reservoirs in China
Cited by: 53
Author(s): Peike Gao, Huimei Tian, Yansen Wang, Yanshu Li, Yan Li, Jinxia Xie, Bing Zeng, Jiefang Zhou, Guoqiang Li, Ting Ma
Software Mentions: 5
Published: over 8 years ago

10.1038/srep40803

Dynamics of Bemisia tabaci biotypes and insecticide resistance in Fujian province in China during 2005–2014
Cited by: 43
Author(s): Feng-Luan Yao, Yu Zheng, Xiaoyan Huang, Xue-Ling Ding, Jiuran Zhao, Nicolas Desneux, Yumei He, Qiyong Weng
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-018-23605-x

High-resolution GPS tracking reveals sex differences in migratory behaviour and stopover habitat use in the Lesser Black-backed Gull Larus fuscus
Cited by: 28
Author(s): Jeroen Baert, Eric Stienen, Brigitte C. Heylen, Marwa M. Kavelaars, Roland-Jan Buijs, Judy Shamoun‐Baranes, Luc Lens, Wendt Müller
Software Mentions: 5
Published: over 6 years ago

10.1038/s41598-018-27047-3

Close inbreeding and low genetic diversity in Inner Asian human populations despite geographical exogamy
Cited by: 17
Author(s): Nina Marchi, Philippe Mennecier, Myriam Georges, Sophie Lafosse, Tatyana Hegay, Choduraa Dorzhu, Boris Chichlo, Laure Ségurel, Évelyne Heyer
Software Mentions: 5
Published: over 6 years ago

10.1038/s41396-020-0669-4

Genome diversification in globally distributed novel marine Proteobacteria is linked to environmental adaptation
Cited by: 96
Author(s): Zhichao Zhou, Patricia Q. Tran, Kristopher Kieft, Karthik Anantharaman
Software Mentions: 5
Published: over 4 years ago

10.5195/jmla.2020.836

What we talk about when we talk about medical librarianship: an analysis of Medical Library Association annual meeting abstracts, 2001-2019.
Cited by: 4
Author(s): Bethany Myers
Software Mentions: 5
Published: about 4 years ago

10.7717/peerj.4602

The neglected bee trees: European beech forests as a home for feral honey bee colonies
Cited by: 39
Author(s): Patrick L. Kohl, Benjamin Rutschmann
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0130027

Improving the Rank Precision of Population Health Measures for Small Areas with Longitudinal and Joint Outcome Models
Cited by: 7
Author(s): Jessica K. Athens, Patrick L. Remington, Ronald E. Gangnon
Software Mentions: 4
Published: about 9 years ago

10.1371/journal.pone.0236619

Enacting national social distancing policies corresponds with dramatic reduction in COVID19 infection rates
Cited by: 101
Author(s): Daniel J. McGrail, Jianli Dai, Kathleen M. McAndrews, Raghu Kalluri
Software Mentions: 4
Published: about 4 years ago

10.1038/srep22125

Global functional diversity of freshwater fish is concentrated in the Neotropics while functional vulnerability is widespread
Cited by: 152
Author(s): Aurèle Toussaint, Nicolas Charpin, Sébastien Brosse, Sébastien Villéger
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0149498

Measuring Progress on the Control of Porcine Reproductive and Respiratory Syndrome (PRRS) at a Regional Level: The Minnesota N212 Regional Control Project (Rcp) as a Working Example
Cited by: 17
Author(s): Pablo Valdes–Donoso, Lovell S. Jarvis, Dave Wright, Julio Álvarez, Andrés Perez
Software Mentions: 4
Published: over 8 years ago

10.1186/s13045-020-00908-z

The global burden and attributable risk factor analysis of acute myeloid leukemia in 195 countries and territories from 1990 to 2017: estimates based on the global burden of disease study 2017
Cited by: 102
Author(s): Ming Yi, An‐Ping Li, Linghui Zhou, Qian Chu, Yongping Song, Kongming Wu
Software Mentions: 4
Published: over 4 years ago

10.1038/s41598-017-16438-7

Species composition and environmental adaptation of indigenous Chinese cattle
Cited by: 73
Author(s): Yahui Gao, Mathieu Gautier, Xiangdong Ding, Hao Zhang, Yachun Wang, Xi Wang, Omar Faruque, Junya Li, Shaohui Ye, Xin Gou, Jianlin Han, Johannes A. Lenstra, Yi Zhang
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0146417

Population Genetics of the Rubber-Producing Russian Dandelion (Taraxacum kok-saghyz)
Cited by: 21
Author(s): Edward V. McAssey, Ethan G. Gudger, Matthew P. Zuellig, John M. Burke
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pone.0232041

Costs of cannabis testing compliance: Assessing mandatory testing in the California cannabis market
Cited by: 7
Author(s): Pablo Valdes–Donoso, Daniel A. Sumner, Robin S. Goldstein
Software Mentions: 4
Published: over 4 years ago

10.1186/1471-2148-14-29

A phylogeny for the pomatiopsidae (Gastropoda: Rissooidea): a resource for taxonomic, parasitological and biodiversity studies
Cited by: 19
Author(s): Liang Liu, Guan-Nan Huo, Hong-Bin He, Ben-jiang Zhou, Stephen W. Attwood
Software Mentions: 4
Published: over 10 years ago

10.1038/s41598-019-44230-2

Genetic structure and forensic characteristics of Tibeto-Burman-speaking Ü-Tsang and Kham Tibetan Highlanders revealed by 27 Y-chromosomal STRs
Cited by: 16
Author(s): Guanglin He, Zheng Wang, Yongdong Su, Xing Zou, Mengge Wang, Xu Chen, Bo Gao, Jing Liu, Shouyu Wang, Yiping Hou
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-56227-y

Extensive recombination challenges the utility of Sugarcane mosaic virus phylogeny and strain typing
Cited by: 13
Author(s): Luke Braidwood, Sebastian Müller, David C. Baulcombe
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0127292

Age Specific Survival Rates of Steller Sea Lions at Rookeries with Divergent Population Trends in the Russian Far East
Cited by: 17
Author(s): Alexey Altukhov, Russel D. Andrews, Donald G. Calkins, Thomas S. Gelatt, Eliezer Gurarie, Thomas R. Loughlin, Evgeny Mamaev, В. С. Никулин, Peter A. Permyakov, Sergey D. Ryazanov, Vladimir V. Vertyankin, Vladimir N. Burkanov
Software Mentions: 4
Published: over 9 years ago