cran: gridExtra | Projects | Ecosyste.ms: Papers

10.3389/fmicb.2020.01190

Genetic Organization of the aprX-lipA2 Operon Affects the Proteolytic Potential of Pseudomonas Species in Milk
Cited by: 14
Author(s): Christopher Maier, Christopher Huptas, Mario von Neubeck, Stephen W. Scherer, Mareike Wenning, Genia Lücking
Software Mentions: 10
Published: over 4 years ago

10.3389/fmicb.2021.642543

Patterns of Microbiome Variation Among Infrapopulations of Permanent Bloodsucking Parasites
Cited by: 6
Author(s): Jorge Doña, Stephany Virrueta Herrera, Tommi Nyman, Mervi Kunnasranta, Kevin P. Johnson
Software Mentions: 10
Published: over 3 years ago

10.1001/jamanetworkopen.2021.14162

Association of Copy Number Variation Signature and Survival in Patients With Serous Ovarian Cancer
Cited by: 14
Author(s): Ryon P. Graf, Ramez N. Eskander, Leo Brueggeman, Dwayne G. Stupack
Software Mentions: 10
Published: over 3 years ago

10.1186/s12859-015-0613-1

tcR: an R package for T cell receptor repertoire advanced data analysis
Cited by: 199
Author(s): Vadim Nazarov, Mikhail V. Pogorelyy, Ekaterina A. Komech, Ivan V. Zvyagin, Dmitriy A. Bolotin, Mikhail Shugay, Dmitriy M. Chudakov, Yuri B. Lebedev, Ilgar Z. Mamedov
Software Mentions: 10
Published: over 9 years ago

10.1007/s11357-021-00424-z

Impact of COVID-19 on ischemic stroke care in Hungary
Cited by: 5
Author(s): Péter Pál Böjti, G. Szilágyi, Balázs Dobi, Rita Stang, I Szikora, Balázs Kis, Ákos Kornfeld, Csaba Óváry, Lóránd Eröss, Péter Banczerowski, Wojciech Kuczyński, Dániel Bereczki
Software Mentions: 10
Published: over 3 years ago

10.1371/journal.pone.0218773

Demand and level of service inflation in Floating Catchment Area (FCA) methods
Cited by: 34
Author(s): Antonio Páez, Christopher D. Higgins, Salvatore Vivona
Software Mentions: 10
Published: over 5 years ago

10.1371/journal.pone.0216723

A metadata approach to evaluate the state of ocean knowledge: Strengths, limitations, and application to Mexico
Cited by: 10
Author(s): Juliano Palacios‐Abrantes, Andrés M. Cisneros‐Montemayor, Miguel Á. Cisneros-Mata, Laura Rodríguez, Francisco Arreguı́n-Sánchez, Verónica Aguilar, Santiago Domínguez-Sánchez, Stuart Fulton, Raquel López-Sagástegui, Héctor Reyes‐Bonilla, Rocío Rivera-Campos, Silvia Salas, Nuno Simões, William W. L. Cheung
Software Mentions: 10
Published: over 5 years ago

10.1186/s13071-020-04319-4

Retrospective analysis of feline intestinal parasites: trends in testing positivity by age, USA geographical region and reason for veterinary visit
Cited by: 7
Author(s): Sarah Sweet, Donald Szlosek, Donald J. McCrann, Michael J. Coyne, David Kincaid, Evan Hegarty
Software Mentions: 10
Published: about 4 years ago

10.3389/fgene.2021.682475

Genomic and Chemical Diversity of Commercially Available High-CBD Industrial Hemp Accessions
Cited by: 10
Author(s): Matthew Johnson, Jason Wallace
Software Mentions: 10
Published: over 3 years ago

10.7717/peerj.10421

Loss of HOXB3 correlates with the development of hormone receptor negative breast cancer
Cited by: 6
Author(s): Lizhe Zhu, Shibo Yu, Siyuan Jiang, Ge Gao, Yan Yu, Yong Jin Zhou, Ligang Niu, Jing He, Yu Ren, Bin Wang
Software Mentions: 10
Published: about 4 years ago

10.3389/fmicb.2018.01598

Microbiome Composition in Both Wild-Type and Disease Model Mice Is Heavily Influenced by Mouse Facility
Cited by: 60
Author(s): Kristopher D. Parker, Shannon E. Albeke, Jason P. Gigley, Allan M. Goldstein, Naomi Ward
Software Mentions: 10
Published: over 6 years ago

10.1007/s11250-021-02620-7

Risk factors associated with Ctenocephalides felis flea infestation of peri-urban goats: a neglected parasite in an under-appreciated host
Cited by: 4
Author(s): Julia Rose Dahm, Jordana Burdon Bailey, Robert F. Kelly, Patrick Chikungwa, Julius L.C. Chulu, Lívio Martins Costa, Emily June Freeman, Dagmar Mayer, Stella Mazeri, Neil Sargison
Software Mentions: 10
Published: over 3 years ago

10.1016/S2213-2600(21)00175-2

Changes in in-hospital mortality in the first wave of COVID-19: a multicentre prospective observational cohort study using the WHO Clinical Characterisation Protocol UK
Cited by: 71
Author(s): Annemarie B Docherty, Rachel Mulholland, Nazir Lone, Christopher P. Cheyne, Daniela De Angelis, Karla Díaz-Ordaz, Cara Donegan, Thomas M Drake, Jake Dunning, Sebastian Funk, Marta García‐Fiñana, Michelle Girvan, Hayley Hardwick, Janet Harrison, Antonia Ho, David Hughes, Ruth H. Keogh, Peter Kirwan, Gary Leeming, J. Van-Tam, Riinu Pius, Clark D Russell, Rebecca G. Spencer, Brian D. M. Tom, Lance Turtle, Peter Openshaw, J Kenneth Baillie, Ewen M Harrison, Malcolm G Semple
Software Mentions: 10
Published: over 3 years ago

10.1093/femsec/fiab127

Microbial characterisation and Cold-Adapted Predicted Protein (CAPP) database construction from the active layer of Greenland's permafrost
Cited by: 1
Author(s): Gilda Varliero, Muhammad Rafiq, Swati Singh, Annabel Summerfield, Fotis Sgouridis, Donald A. Cowan, Gary Barker
Software Mentions: 10
Published: about 3 years ago

10.1038/s41598-020-62453-6

Patterns of Rift Valley fever virus seropositivity in domestic ruminants in central South Africa four years after a large outbreak
Cited by: 19
Author(s): Yusuf B. Ngoshe, Alida Avenant, Melinda K. Rostal, William B. Karesh, Janusz T. Pawęska, Whitney Bagge, Petrus Jansen van Vuren, Alan C. Kemp, Claudia Cordel, Veerle Msimang, Peter N. Thompson
Software Mentions: 10
Published: over 4 years ago

10.1007/s00228-020-03052-2

Potentially inappropriate prescribing in older hospitalized Dutch patients according to the STOPP/START criteria v2: a longitudinal study
Cited by: 9
Author(s): Birgit A. Damoiseaux-Volman, Stephanie Medlock, Kimmy Raven, Danielle Sent, Johannes A. Romijn, Nathalie van der Velde, Ameen Abu‐Hanna
Software Mentions: 10
Published: almost 4 years ago

10.3389/fpls.2021.612843

Development and Validation of Methodology for Estimating Potato Canopy Structure for Field Crop Phenotyping and Improved Breeding
Cited by: 10
Author(s): Filipe Colwell, Jock Souter, Glenn Bryan, Lindsey Compton, Neil Boonham, Ankush Prashar
Software Mentions: 9
Published: almost 4 years ago

10.1186/s12859-017-1651-7

Zipper plot: visualizing transcriptional activity of genomic regions
Cited by: 5
Author(s): Francisco Avila Cobos, Jasper Anckaert, Pieter-Jan Volders, Celine Everaert, Dries Rombaut, Jo Vandesompele, Katleen De Preter, Pieter Mestdagh
Software Mentions: 9
Published: over 7 years ago

10.1128/mSphere.00097-18

Influential Parameters for the Analysis of Intracellular Parasite Metabolomics
Cited by: 11
Author(s): Maureen A. Carey, Vincent Covelli, Audrey C. Brown, Gregory L. Medlock, Mareike Haaren, Jessica G. Cooper, Jason A. Papin, Jennifer L. Guler
Software Mentions: 9
Published: over 6 years ago

10.18632/oncotarget.12360

Prognostic effect of intratumoral neutrophils across histological subtypes of non-small cell lung cancer
Cited by: 45
Author(s): Mehrdad Rakaee, Lill-Tove Busund, Erna-Elise Paulsen, Elin Richardsen, Samer Al-Saad, Sigve Andersen, Tom Dønnem, Roy M. Bremnes, Thomas K. Kilvaer
Software Mentions: 9
Published: about 8 years ago

10.1038/s41598-020-62842-x

A year in the life of a North Atlantic seabird: behavioural and energetic adjustments during the annual cycle
Cited by: 28
Author(s): Ruth E. Dunn, Sarah Wanless, Francis Daunt, Michael Harris, Jonathan A. Green
Software Mentions: 9
Published: over 4 years ago

10.1371/journal.pmed.1002686

Deep learning for chest radiograph diagnosis: A retrospective comparison of the CheXNeXt algorithm to practicing radiologists
Cited by: 755
Author(s): Pranav Rajpurkar, Jeremy Irvin, Robyn L. Ball, Kaylie Zhu, Brandon Yang, Hershel Mehta, Tony Duan, Daisy Yi Ding, Aarti Bagul, Curtis P. Langlotz, Bhavik N. Patel, Kristen W. Yeom, Katie Shpanskaya, Francis G. Blankenberg, Jayne Seekins, Timothy J. Amrhein, David A. Mong, Safwan Halabi, Evan J. Zucker, Andrew Y. Ng, Matthew P. Lungren
Software Mentions: 9
Published: about 6 years ago

10.1371/journal.pmed.1002362

Childhood adiposity and risk of type 1 diabetes: A Mendelian randomization study
Cited by: 86
Author(s): Jenny C Censin, Christoph Nowak, Nicholas Cooper, Peter Bergsten, John A. Todd, Tove Fall
Software Mentions: 9
Published: over 7 years ago

10.1038/s41396-019-0416-x

Variability in snake skin microbial assemblages across spatial scales and disease states
Cited by: 19
Author(s): Donald M. Walker, Jacob E. Leys, Matthew Grisnik, Alejandro Grajal-Puche, Christopher M. Murray, Matthew C. Allender
Software Mentions: 9
Published: over 5 years ago

10.1371/journal.pone.0192157

Tissue analyses reveal a potential immune-adjuvant function of FAP-1 positive fibroblasts in non-small cell lung cancer
Cited by: 30
Author(s): Thomas K. Kilvaer, Mehrdad Rakaee, Turid Hellevik, Arne Östman, Carina Strell, Roy M. Bremnes, Lill-Tove Busund, Tom Dønnem, Iñigo Martínez-Zubiaurre
Software Mentions: 9
Published: almost 7 years ago

10.1186/s13040-021-00267-6

eQTpLot: a user-friendly R package for the visualization of colocalization between eQTL and GWAS signals
Cited by: 11
Author(s): Theodore G. Drivas, Anastasia Lucas, Marylyn D. Ritchie
Software Mentions: 9
Published: over 3 years ago

10.3390/jintelligence6030030

The Relation of Personality and Intelligence—What Can the Brunswik Symmetry Principle Tell Us?
Cited by: 80
Author(s): André Kretzschmar, Marion Spengler, Anna‐Lena Schubert, Ricarda Steinmayr, Matthias Ziegler
Software Mentions: 9
Published: over 6 years ago

10.1038/s41598-017-04141-6

The Microbiome of Endophytic, Wood Colonizing Bacteria from Pine Trees as Affected by Pine Wilt Disease
Cited by: 53
Author(s): Diogo Neves Proença, Romeu Francisco, Susanne Kublik, Anne Schöler, Gisle Vestergaard, Michael Schloter, Paula V. Morais
Software Mentions: 9
Published: over 7 years ago

10.1371/journal.pone.0134965

Cancer Associated Fibroblasts in Stage I-IIIA NSCLC: Prognostic Impact and Their Correlations with Tumor Molecular Markers
Cited by: 60
Author(s): Thomas K. Kilvaer, Mehrdad Rakaee, Turid Hellevik, Samer Al-Saad, Erna-Elise Paulsen, Roy M. Bremnes, Lill-Tove Busund, Tom Dønnem, Iñigo Martínez
Software Mentions: 9
Published: over 9 years ago

10.1186/s12967-021-02770-0

Hypermethylation of heparanase 2 promotes colorectal cancer proliferation and is associated with poor prognosis
Cited by: 9
Author(s): Hui Zhang, Chang Xu, Shi Chen, Junying Zhang, Ting Qian, Zhuo Wang, Rong Ma, Jianzhong Wu, Feng Jiang, Jifeng Feng
Software Mentions: 9
Published: over 3 years ago

10.1016/j.celrep.2020.108308

Developmental Gene Expression Differences between Humans and Mammalian Models
Cited by: 34
Author(s): Margarida Cardoso-Moreira, Ioannis Sarropoulos, Britta Velten, Matthew Mort, David Neil Cooper, Wolfgang Huber, Henrik Kaessmann
Software Mentions: 9
Published: about 4 years ago

10.1016/j.comppsych.2019.152143

Longitudinal population subgroups of CRP and risk of depression in the ALSPAC birth cohort
Cited by: 11
Author(s): Emanuele F. Osimo, Jan S̆tochl, Stanley Zammit, Glyn Lewis, Peter B. Jones, Golam M. Khandaker
Software Mentions: 9
Published: almost 5 years ago

10.1073/pnas.2100542118

Self-mediated positive selection of T cells sets an obstacle to the recognition of nonself
Cited by: 9
Author(s): Balázs Koncz, Gergő Mihály Balogh, Benjamin Tamás Papp, Leó Asztalos, Lajos Kemény, Máté Manczinger
Software Mentions: 9
Published: about 3 years ago

10.1016/j.ebiom.2015.09.027

Distinct Transcriptional and Anti-Mycobacterial Profiles of Peripheral Blood Monocytes Dependent on the Ratio of Monocytes: Lymphocytes
Cited by: 58
Author(s): Vivek Naranbhai, Helen A. Fletcher, Rachel Tanner, Matthew K. O’Shea, Helen McShane, Benjamin P. Fairfax, Julian C. Knight, Adrian V. S. Hill
Software Mentions: 9
Published: about 9 years ago

10.3389/fpsyg.2020.01044

Association Between Preschoolers’ Specific Fine (But Not Gross) Motor Skills and Later Academic Competencies: Educational Implications
Cited by: 24
Author(s): Elena Escolano Pérez, Maria Luisa Herrero-Nivela, José Luís Losada
Software Mentions: 9
Published: over 4 years ago

10.1186/s13071-021-04678-6

A 3-year retrospective analysis of canine intestinal parasites: fecal testing positivity by age, U.S. geographical region and reason for veterinary visit
Cited by: 14
Author(s): Sarah Sweet, Evan Hegarty, Donald J. McCrann, Michael J. Coyne, Dave Kincaid, Donald Szlosek
Software Mentions: 9
Published: over 3 years ago

10.7717/peerj.7155

Nature representation in South American protected areas: country contrasts and conservation priorities
Cited by: 16
Author(s): Germán Baldi, Santiago A. Schauman, Marcos Texeira, Sofía Marinaro, Osvaldo A. Martin, Patricia Gandini, Estéban G. Jobbágy
Software Mentions: 9
Published: over 5 years ago

10.7717/peerj.10008

A model of twenty-three metabolic-related genes predicting overall survival for lung adenocarcinoma
Cited by: 3
Author(s): Zhenyu Zhao, Boxue He, Qidong Cai, Pengfei Zhang, Ping Xiong, Yuqian Zhang, Hui Xie, Xiang Wang
Software Mentions: 9
Published: about 4 years ago

10.1002/ece3.4387

Toward an ecoregion scale evaluation of <scp>eDNA</scp> metabarcoding primers: A case study for the freshwater fish biodiversity of the Murray–Darling Basin (Australia)
Cited by: 69
Author(s): Jonas Bylemans, Dianne Gleeson, Christopher M. Hardy, Elise M. Furlan
Software Mentions: 8
Published: over 6 years ago

10.3389/fnins.2020.00687

Sustained Improvement of Negative Self-Schema After a Single Ketamine Infusion: An Open-Label Study
Cited by: 9
Author(s): Gregor Hasler, Samir Suker, Georgios Schoretsanitis, Yoan Mihov
Software Mentions: 8
Published: over 4 years ago

10.7717/peerj.7816

CELSR3 mRNA expression is increased in hepatocellular carcinoma and indicates poor prognosis
Cited by: 11
Author(s): Xuefeng Gu, Hongbo Li, Ling Sha, Man Yuan, Chao Shi, Wei Zhao
Software Mentions: 8
Published: about 5 years ago

10.1093/femsec/fiaa244

Utilization of low-molecular-weight organic compounds by the filterable fraction of a lotic microbiome
Cited by: 0
Author(s): Lydia-Ann J. Ghuneim, Marco A. Distaso, Tatyana Chernikova, Rafael Bargiela, Evgenii A. Lunev, Aleksei A. Korzhenkov, Stepan V. Toshchakov, David Rojo, Coral Barbas, Manuel Ferrer, Olga V. Golyshina, Peter N. Golyshin, Davey L. Jones
Software Mentions: 8
Published: almost 4 years ago

10.3389/fmicb.2021.627437

A Taxon-Wise Insight Into Rock Weathering and Nitrogen Fixation Functional Profiles of Proglacial Systems
Cited by: 4
Author(s): Gilda Varliero, Alexandre M. Anesio, Gary Barker
Software Mentions: 8
Published: about 3 years ago

10.3390/microorganisms9050915

Lactobacillus reuteri Colonisation of Extremely Preterm Infants in a Randomised Placebo-Controlled Trial
Cited by: 13
Author(s): Johanne E. Spreckels, Erik Wejryd, Giovanna Marchini, Baldvin Jónsson, Dylan de Vries, Maria C. Jenmalm, Eva Landberg, Eva Sverremark-Ekström, Magalí Martí, Thomas Abrahamsson
Software Mentions: 8
Published: over 3 years ago

10.1371/journal.pone.0203346

Feasibility of developing reliable gene expression modules from FFPE derived RNA profiled on Affymetrix arrays
Cited by: 3
Author(s): Vinu José, Debora Fumagalli, Françoise Rothé, Samira Majjaj, Sherene Loi, Stefan Michiels, Christos Sotiriou
Software Mentions: 8
Published: about 6 years ago

10.3389/fmicb.2016.00517

Spatio-Temporal Interdependence of Bacteria and Phytoplankton during a Baltic Sea Spring Bloom
Cited by: 57
Author(s): Carina Bunse, Mireia Bertos‐Fortis, Ingrid Sassenhagen, Sirje Sildever, Conny Sjöqvist, Anna Godhe, Susanna Gross, Anke Kremp, Inga Lips, Nina Lundholm, Karin Rengefors, Josefin Sefbom, Jarone Pinhassi, Catherine Legrand
Software Mentions: 8
Published: over 8 years ago

10.1371/journal.pone.0245639

Are we missing the forest for the trees? Conspecific negative density dependence in a temperate deciduous forest
Cited by: 3
Author(s): Kathryn E. Barry, Stefan A. Schnitzer
Software Mentions: 8
Published: over 3 years ago

10.1097/MD.0000000000026194

Integrated analysis of ceRNA network in hepatocellular carcinoma using bioinformatics analysis
Cited by: 5
Author(s): Yu Luo, Hongjuan Li, Hongli Huang, Ling Xue, Haiwen Li, Li Liu, Haiyan Fu
Software Mentions: 8
Published: over 3 years ago

10.1371/journal.pone.0199841

Spatially explicit action research for coastal fisheries management
Cited by: 7
Author(s): Tara N. Lawrence, R. S. Bhalla
Software Mentions: 8
Published: over 6 years ago

10.1038/s41598-021-88139-1

Age biases the judgment rather than the perception of an ambiguous figure
Cited by: 1
Author(s): Ambroos Brouwer, Xuxi Jin, Aisha Humaira Waldi, Steven Verheyen
Software Mentions: 8
Published: over 3 years ago

10.1038/s41598-017-09084-6

Taxonomic bias in biodiversity data and societal preferences
Cited by: 397
Author(s): Julien Troudet, Philippe Grandcolas, Amandine Blin, Régine Vignes-Lebbe, Frédéric Legendre
Software Mentions: 8
Published: over 7 years ago

10.1093/rheumatology/keab060

Do people with rheumatoid arthritis maintain their physical activity level at treatment onset over the first year of methotrexate therapy?
Cited by: 4
Author(s): James M Gwinnutt, Husain Alsafar, Kimme L Hyrich, Mark Lunt, Anne Barton, Suzanne Verstappen, Rams co-investigators
Software Mentions: 8
Published: almost 4 years ago

10.1186/s13148-020-00889-3

The MLH1 polymorphism rs1800734 and risk of endometrial cancer with microsatellite instability
Cited by: 6
Author(s): Holly Russell, Katarzyna Kedzierska, Daniel D. Buchanan, Russell J. Thomas, Emma Tham, Miriam Mints, Anne Keränen, Graham G. Giles, Melissa C. Southey, Roger L. Milne, Ian Tomlinson, David N. Church, Amanda B. Spurdle, Tracy A. O’Mara, Annabelle Lewis
Software Mentions: 8
Published: over 4 years ago

10.1080/16549716.2018.1440783

Health Equity Assessment Toolkit Plus (HEAT Plus): software for exploring and comparing health inequalities using uploaded datasets
Cited by: 42
Author(s): Ahmad Reza Hosseinpoor, Anne Schlotheuber, Devaki Nambiar, Zev Ross
Software Mentions: 8
Published: over 6 years ago

10.1098/rspb.2017.0905

The evolution of dual meat and milk cattle husbandry in Linearbandkeramik societies
Cited by: 43
Author(s): Rosalind Gillis, Lenka Kovačíková, Stéphanie Bréhard, Émilie Guthmann, Ivana Vostrovská, Hana Nohálová, Rose‐Marie Arbogast, László Domboróczki, Joachim Pechtl, Alexander Anders, Arkadiusz Marciniak, Anne Tresset, Jean‐Denis Vigne
Software Mentions: 8
Published: over 7 years ago

10.1186/s40170-020-00220-x

Metabolite AutoPlotter - an application to process and visualise metabolite data in the web browser
Cited by: 18
Author(s): Matthias Pietzke, Alexei Vazquez
Software Mentions: 8
Published: over 4 years ago

10.1038/s41598-021-93874-6

Factors associated with baseline mortality in Norwegian Atlantic salmon farming
Cited by: 26
Author(s): Victor Henrique Silva de Oliveira, Katharine R. Dean, Lars Qviller, Carsten Kirkeby, Bogi Bech Jensen
Software Mentions: 8
Published: over 3 years ago

10.3389/fonc.2021.625007

Comprehensive Analysis of the Functions and Prognostic Value of RNA-Binding Proteins in Thyroid Cancer
Cited by: 7
Author(s): Yue Ma, Shi Yin, Xiaofeng Liu, Jing Hu, Ning Cai, Xiao-bei Zhang, Fu Li, Xuchen Cao, Yue Yu
Software Mentions: 8
Published: over 3 years ago

10.1371/journal.pone.0216229

Effects of cropping, smoothing, triangle count, and mesh resolution on 6 dental topographic metrics
Cited by: 23
Author(s): Michael A. Berthaume, Julia M. Winchester, Kornelius Kupczik
Software Mentions: 7
Published: over 5 years ago

10.3390/cancers13102432

Computational Treatment Simulations to Assess the Need for Personalized Tamoxifen Dosing in Breast Cancer Patients of Different Biogeographical Groups
Cited by: 1
Author(s): Anna Mueller‐Schoell, Robin Michelet, Lena Klopp‐Schulze, Madelé van Dyk, Thomas E. Mürdter, Matthias Schwab, Markus Joerger, Wilhelm Huisinga, Gerd Mikus, Charlotte Kloft
Software Mentions: 7
Published: over 3 years ago

10.18632/aging.202490

Long non-coding RNA TP73-AS1 is a potential immune related prognostic biomarker for glioma
Cited by: 8
Author(s): Bo Zhang, Qinglin Li, Bin Wu, Shuyuan Zhang, Liwen Liu, Kai Jin, Sheng Li, Kai Li, Zeng Wang, Yi Lu, Xiaofeng Liang, Chao Sun
Software Mentions: 7
Published: almost 4 years ago

10.1186/s12864-021-07917-3

Facilitating population genomics of non-model organisms through optimized experimental design for reduced representation sequencing
Cited by: 6
Author(s): Henrik Christiansen, Franz M. Heindler, Bart Hellemans, Quentin Jossart, Francesca Pasotti, Henri Robert, Marie Verheye, Bruno Danis, Marc Kochzius, Frédérik Leliaert, Camille Moreau, Tasnim Patel, Anton P. Van de Putte, Ann Vanreusel, Filip Volckaert, Isa Schön
Software Mentions: 7
Published: over 3 years ago

10.1186/s12864-019-6275-z

Genome-wide association study and genomic selection for soybean chlorophyll content associated with soybean cyst nematode tolerance
Cited by: 29
Author(s): Waltram Ravelombola, Jun Qin, Ainong Shi, Liana Nice, Yong Bao, Aaron J. Lorenz, J. H. Orf, Nevin D. Young, Senyu Chen
Software Mentions: 7
Published: almost 5 years ago

10.1186/s12864-021-07766-0

Genome analysis of Pseudomonas sp. OF001 and Rubrivivax sp. A210 suggests multicopper oxidases catalyze manganese oxidation required for cylindrospermopsin transformation
Cited by: 0
Author(s): Erika Berenice Martínez-Ruiz, Myriel Cooper, Jimena Barrero-Canosa, Mindia Haryono, Irina Bessarab, Rohan B. H. Williams, Ulrich Szewzyk
Software Mentions: 7
Published: over 3 years ago

10.1098/rsos.170051

Contradicting habitat type-extinction risk relationships between living and fossil amphibians
Cited by: 3
Author(s): Melanie Tietje, Mark‐Oliver Rödel
Software Mentions: 7
Published: over 7 years ago

10.1371/journal.pone.0211601

Testing the potential of 50 kHz rat calls as a species-specific rat attractant
Cited by: 7
Author(s): Nicola B. Davidson, Jane L. Hurst
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-021-87368-8

Alteration of the gut fecal microbiome in children living with HIV on antiretroviral therapy in Yaounde, Cameroon
Cited by: 12
Author(s): William Baiye Abange, Casey Martin, Aubin Nanfack, Laeticia Grace Yatchou, Nichole M. Nusbacher, Clement Assob Nguedia, Hortense Gonsu Kamga, Joseph Fokam, Sean Kennedy, Alexis Ndjolo, Catherine Lozupone, Céline Nguefeu Nkenfou
Software Mentions: 7
Published: over 3 years ago

10.1186/s13054-021-03503-x

Fluid proteomics of CSF and serum reveal important neuroinflammatory proteins in blood–brain barrier disruption and outcome prediction following severe traumatic brain injury: a prospective, observational study
Cited by: 26
Author(s): Caroline Lindblad, Elisa Pin, David R. Just, Faiez Al Nimer, Peter Nilsson, Bo‐Michael Bellander, Mikael Svensson, Fredrik Piehl, Eric Peter Thelin
Software Mentions: 7
Published: over 3 years ago

10.3390/jcm8081128

NEWS2 is Superior to qSOFA in Detecting Sepsis with Organ Dysfunction in the Emergency Department
Cited by: 60
Author(s): Lisa Mellhammar, Adam Linder, Jonas Tverring, Bértil Christensson, John H. Boyd, Parham Sendi, Per Åkesson, Fredrik Kahn
Software Mentions: 7
Published: over 5 years ago

10.1002/ece3.5622

Consequences of marine barriers for genetic diversity of the coral‐specialist yellowbar angelfish from the Northwestern Indian Ocean
Cited by: 17
Author(s): Felipe Torquato, Pedro Range, Radhouane Ben‐Hamadou, Eva Egelyng Sigsgaard, Philip Francis Thomsen, Rodrigo Riera, Michael L. Berumen, John A. Burt, David A. Feary, Alyssa Marshell, Daniele D’Agostino, Joseph D. DiBattista, Peter Rask Møller
Software Mentions: 7
Published: about 5 years ago

10.1002/ece3.3943

Seasonal bat activity related to insect emergence at three temperate lakes
Cited by: 26
Author(s): Ioanna Salvarina, Dorian Gravier, Karl‐Otto Rothhaupt
Software Mentions: 7
Published: over 6 years ago

10.3389/fpls.2020.01085

Biomonitoring of Polycyclic Aromatic Hydrocarbon Deposition in Greenland Using Historical Moss Herbarium Specimens Shows a Decrease in Pollution During the 20th Century
Cited by: 12
Author(s): Karen Martinez-Swatson, Eszter Mihály, Christian Lange, Madeleine Ernst, Majbrit Dela Cruz, Michelle Price, Teis Nørgaard Mikkelsen, Jan H. Christensen, Nina Lundholm, Nina Rønsted
Software Mentions: 7
Published: over 4 years ago

10.3390/ijerph18158115

Longitudinal Associations of Marital, Parenting, and Employment Transitions with Weight Gain in a Multi-Ethnic Asian Population Aged 21 Years and Above
Cited by: 5
Author(s): Clare Whitton, Yvonne Hui Min Wong, Rob M. van Dam
Software Mentions: 7
Published: over 3 years ago

10.16910/jemr.12.2.2

The function of “looking-at-nothing” for sequential sensorimotor tasks: Eye movements to remembered action-target locations
Cited by: 0
Author(s): Rebecca M. Foerster
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pntd.0008015

Plasma metabolomics of the time resolved response to Opisthorchis felineus infection in an animal model (golden hamster, Mesocricetus auratus)
Cited by: 9
Author(s): Daria Kokova, Aswin Verhoeven, Ekaterina A. Perina, В. В. Иванов, Elena M. Knyazeva, Irina V. Saltykova, Oleg A. Mayboroda
Software Mentions: 7
Published: almost 5 years ago

10.2807/1560-7917.ES.2017.22.4.30452

Widespread activity of multiple lineages of Usutu virus, western Europe, 2016
Cited by: 105
Author(s): Dániel Cadar, Renke Lühken, Henk P. van der Jeugd, Mutien-Marie Garigliany, Ute Ziegler, Markus Keller, Jennifer Lahoreau, Lars Lachmann, Norbert Becker, Marja Kik, Bas B. Oude Munnink, Stefan Bosch, Egbert Tannich, Annick Lindén, Volker Schmidt, Marion Koopmans, Jolianne M. Rijks, Daniël Desmecht, Martin H. Groschup, Chantal Reusken, Jonas Schmidt‐Chanasit
Software Mentions: 7
Published: almost 8 years ago

10.3389/fpsyg.2018.02358

East Asian Young and Older Adult Perceptions of Emotional Faces From an Age- and Sex-Fair East Asian Facial Expression Database
Cited by: 13
Author(s): Yu-Zhen Tu, Dai-Jie Lin, Atsunobu Suzuki, Joshua Oon Soo Goh
Software Mentions: 7
Published: almost 6 years ago

10.3389/fonc.2021.566492

MicroRNA-935 Directly Targets FZD6 to Inhibit the Proliferation of Human Glioblastoma and Correlate to Glioma Malignancy and Prognosis
Cited by: 9
Author(s): Dainan Zhang, Shunchang Ma, Chuanbao Zhang, Peiliang Li, Beibei Mao, Xiudong Guan, Wenqiang Zhou, Jiayi Peng, Xi Wang, Shaomin Li, Wang Jia
Software Mentions: 7
Published: over 3 years ago

10.12688/f1000research.14470.2

Clinotator: analyzing ClinVar variation reports to prioritize reclassification efforts
Cited by: 2
Author(s): Robert R. Butler, Pablo V. Gejman
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pntd.0006044

Exploratory metabolomics study of the experimental opisthorchiasis in a laboratory animal model (golden hamster, Mesocricetus auratus)
Cited by: 15
Author(s): Daria Kokova, Sarantos Kostidis, Judit Morello, Nataly Dementeva, Ekaterina A. Perina, V. V. Ivanov, Л. М. Огородова, А. Э. Сазонов, Irina V. Saltykova, Oleg A. Mayboroda
Software Mentions: 7
Published: about 7 years ago

10.3390/foods6040031

Validation of a Novel Technique and Evaluation of the Surface Free Energy of Food
Cited by: 19
Author(s): Tugce Sentürk Parreidt, Markus Schmid, Carolin Hauser
Software Mentions: 7
Published: over 7 years ago

10.3390/foods8060203

The Development of a Uniform Alginate-Based Coating for Cantaloupe and Strawberries and the Characterization of Water Barrier Properties
Cited by: 29
Author(s): Tugce Sentürk Parreidt, Martina Lindner, Isabell Rothkopf, Markus Schmid, Kajetan Müller
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pntd.0005050

Factors Associated with the Time of Admission among Notified Dengue Fever Cases in Region VIII Philippines from 2008 to 2014
Cited by: 5
Author(s): J Abello, Julita Gil Cuesta, Boyd Roderick Cerro, Debarati Guha-Sapir
Software Mentions: 7
Published: about 8 years ago

10.1002/gepi.22205

Imputed gene associations identify replicable <i>trans</i>‐acting genes enriched in transcription pathways and complex traits
Cited by: 13
Author(s): Heather E. Wheeler, Sally Ploch, Alvaro N. Barbeira, Rodrigo Bonazzola, Angela Andaleon, Alireza Fotuhi Siahpirani, Ashis Saha, Alexis Battle, Sushmita Roy, Hae Kyung Im
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-021-85913-z

Analysis of false-negative rapid diagnostic tests for symptomatic malaria in the Democratic Republic of the Congo
Cited by: 18
Author(s): Jonathan B. Parr, Eddy Kieto, Fernandine Phanzu, Paul Mansiangi, Kashamuka Mwandagalirwa, Nono Mvuama, Ange Landela, Joseph Atibu, Solange Umesumbu Efundu, Jean W. Olenga, Kyaw L. Thwai, Camille Morgan, Madeline Denton, Alison Poffley, Jonathan J. Juliano, Pomie Mungala, Joris Losimba Likwela, Eric Mukomena Sompwe, Eric Rogier, Antoinette Tshefu, Adrien N’Siala, Albert Kalonji
Software Mentions: 6
Published: over 3 years ago

10.3732/apps.1600158

Source Identification of Western Oregon Douglas-Fir Wood Cores Using Mass Spectrometry and Random Forest Classification
Cited by: 31
Author(s): Kristen N. Finch, Edgard O. Espinoza, F. Andrew Jones, Richard Cronn
Software Mentions: 6
Published: over 7 years ago

10.1186/s12859-020-3404-2

IPCO: Inference of Pathways from Co-variance analysis
Cited by: 3
Author(s): Mrinmoy Das, Tarini Shankar Ghosh, Ian B. Jeffery
Software Mentions: 6
Published: almost 5 years ago

10.1186/s12885-015-1993-3

TGFβ isoforms and receptors mRNA expression in breast tumours: prognostic value and clinical implications
Cited by: 23
Author(s): Chenfeng Chen, Kong‐Nan Zhao, Paul P. Masci, Sunil R. Lakhani, Annika Antonsson, Peter T. Simpson, Luis Vitetta
Software Mentions: 6
Published: almost 9 years ago

10.1186/s12879-017-2351-7

1H-NMR analysis of feces: new possibilities in the helminthes infections research
Cited by: 19
Author(s): Sarantos Kostidis, Daria Kokova, Natalia Dementeva, Irina V. Saltykova, Hye Kyong Kim, Young Hae Choi, Oleg A. Mayboroda
Software Mentions: 6
Published: over 7 years ago

10.1186/s12903-018-0666-4

Validity of self-reported number of teeth in middle-aged Finnish adults: the Northern Finland Birth Cohort Study 1966
Cited by: 15
Author(s): Toni Similä, Pentti Nieminen, Jorma I. Virtanen
Software Mentions: 6
Published: almost 6 years ago

10.3390/metabo11090643

Postmortem Metabolomics: Strategies to Assess Time-Dependent Postmortem Changes of Diazepam, Nordiazepam, Morphine, Codeine, Mirtazapine and Citalopram
Cited by: 8
Author(s): Lana Brockbals, Yannick Wartmann, Dylan Mantinieks, Linda Glowacki, Dimitri Gerostamoulos, Thomas Kræmer, Andrea E. Steuer
Software Mentions: 6
Published: about 3 years ago

10.1186/s40168-020-00806-z

RapidAIM: a culture- and metaproteomics-based Rapid Assay of Individual Microbiome responses to drugs
Cited by: 178
Author(s): Leyuan Li, Zhibin Ning, Xu Zhang, Janice Mayne, Kai Cheng, Alain Stintzi, Daniel Figeys
Software Mentions: 6
Published: over 4 years ago

10.1186/s40168-020-00954-2

Bacterial community assemblages in classroom floor dust of 50 public schools in a large city: characterization using 16S rRNA sequences and associations with environmental factors
Cited by: 10
Author(s): Ju‐Hyeong Park, Angela R. Lemons, Jerry Roseman, Brett J. Green, Jean M. Cox‐Ganser
Software Mentions: 6
Published: almost 4 years ago

10.1002/minf.202000005

Using Machine Learning Methods and Structural Alerts for Prediction of Mitochondrial Toxicity
Cited by: 30
Author(s): Jennifer Hemmerich, Florentina Troger, Barbara Füzi, Gerhard Ecker
Software Mentions: 6
Published: over 4 years ago

10.1186/s13567-016-0374-5

Identification of epitopes recognised by mucosal CD4+ T-cell populations from cattle experimentally colonised with Escherichia coli O157:H7
Cited by: 7
Author(s): Alexander Corbishley, Timothy Connelley, E Wolfson, Keith T. Ballingall, Amy Elizabeth Beckett, David L. Gally, Tom N. McNeilly
Software Mentions: 6
Published: about 8 years ago

10.1186/s13071-016-1597-z

Host-feeding patterns of mosquito species in Germany
Cited by: 51
Author(s): Jessica Börstler, Hanna Jöst, R. Garms, Andreas Krüger, Egbert Tannich, Norbert Becker, Jonas Schmidt‐Chanasit, Renke Lühken
Software Mentions: 6
Published: over 8 years ago

10.7717/peerj.1971

PKC in motorneurons underlies self-learning, a form of motor learning in<i>Drosophila</i>
Cited by: 13
Author(s): Julien Colomb, Bjoern Brembs
Software Mentions: 6
Published: over 8 years ago

10.1007/s40037-018-0438-5

#MedEd: exploring the relationship between altmetrics and traditional measures of dissemination in health professions education
Cited by: 38
Author(s): Lauren A. Maggio, Todd C. Leroux, Holly Meyer, Anthony R. Artino
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0221355

Effects of road salt on microbial communities: Halophiles as biomarkers of road salt pollution
Cited by: 17
Author(s): Wolf T. Pecher, M. Emad Al Madadha, Priya DasSarma, Folasade Ekulona, Eric J. Schott, Kelli Crowe, Bojana Stojkovic Gut, Shiladitya DasSarma
Software Mentions: 6
Published: about 5 years ago

10.1038/s41426-018-0204-0

A viral race for primacy: co-infection of a natural pair of low and highly pathogenic H7N7 avian influenza viruses in chickens and embryonated chicken eggs
Cited by: 19
Author(s): Annika Graaf, Reiner Ulrich, Pavlo Maksimov, David Scheibner, Susanne Koethe, Elsayed M. Abdelwhab, Thomas C. Mettenleiter, Martin Beer, Timm Harder
Software Mentions: 6
Published: almost 6 years ago

Projects: cran: gridExtra

Papers Mentioning gridExtra 298