cran: RWeka | Projects | Ecosyste.ms: Papers

10.3390/ijms21062114

Computational Models Using Multiple Machine Learning Algorithms for Predicting Drug Hepatotoxicity with the DILIrank Dataset
Cited by: 22
Author(s): Robert Ancuceanu, Marilena Viorica Hovaneț, Adriana Iuliana Anghel, Florentina Furtunescu, Monica Neagu, Carolina Constantin, Mihaela Dinu
Software Mentions: 24
Published: over 4 years ago

10.1038/s41598-021-88209-4

Identification of transcriptional subtypes in lung adenocarcinoma and squamous cell carcinoma through integrative analysis of microarray and RNA sequencing data
Cited by: 6
Author(s): François Fauteux, Anuradha Surendra, Scott McComb, Youlian Pan, Jonathan D. Hill
Software Mentions: 15
Published: over 3 years ago

10.3390/ijms21010019

Use of QSAR Global Models and Molecular Docking for Developing New Inhibitors of c-src Tyrosine Kinase
Cited by: 8
Author(s): Robert Ancuceanu, Bogdan Ionel Tamba, C. Stoicescu, Mihaela Dinu
Software Mentions: 13
Published: almost 5 years ago

10.1186/s12937-021-00692-7

A review of statistical methods for dietary pattern analysis
Cited by: 103
Author(s): Junkang Zhao, Zhiyao Li, Qian Gao, Haifeng Zhao, Shuting Chen, Ling-Qiao Huang, Yiyun Wang, Tong Wang
Software Mentions: 12
Published: over 3 years ago

10.3389/fsufs.2020.561517

Predictive Models May Complement or Provide an Alternative to Existing Strategies for Assessing the Enteric Pathogen Contamination Status of Northeastern Streams Used to Provide Water for Produce Production
Cited by: 19
Author(s): Daniel Weller, Tanzy Love, Alexandra Belias, Martin Wiedmann
Software Mentions: 12
Published: about 4 years ago

10.1371/journal.pone.0231500

Propensity score adjustment using machine learning classification algorithms to control selection bias in online surveys
Cited by: 23
Author(s): Ramón Ferri‐García, María del Mar Rueda
Software Mentions: 12
Published: over 4 years ago

10.1371/journal.pone.0222603

Clinical correlates of workplace injury occurrence and recurrence in adults
Cited by: 1
Author(s): Zhaoyi Chen, Mattia Prosperi, Jiang Bian, Jae Min, Mo Wang, Chang Li
Software Mentions: 10
Published: about 5 years ago

10.3390/ijms22031399

DIscBIO: A User-Friendly Pipeline for Biomarker Discovery in Single-Cell Transcriptomics
Cited by: 5
Author(s): Salim Ghannoum, Waldir Leoncio Netto, Damiano Fantini, Benjamin Ragan-Kelley, Amirabbas Parizadeh, Emma Jonasson, Anders Ståhlberg, Hesso Farhan, Alvaro Köhn‐Luque
Software Mentions: 9
Published: almost 4 years ago

10.3390/e21050513

Mimicking Anti-Viruses with Machine Learning and Entropy Profiles
Cited by: 10
Author(s): Héctor D. Menéndez, José Luís Llorente
Software Mentions: 9
Published: over 5 years ago

10.1038/srep30086

Random Bits Forest: a Strong Classifier/Regressor for Big Data
Cited by: 22
Author(s): Yi Wang, Li Yi, Weilin Pu, Kathryn Wen, Yin Yao Shugart, Momiao Xiong, Li Jin
Software Mentions: 8
Published: over 8 years ago

10.3390/diagnostics11091718

Comparison of Different Machine Learning Classifiers for Glaucoma Diagnosis Based on Spectralis OCT
Cited by: 15
Author(s): Chaowei Wu, Hsiang-Li Shen, Chi-Jie Lu, Ssu-Han Chen, Hsin‐Yi Chen
Software Mentions: 7
Published: about 3 years ago

10.1186/s12859-021-04049-z

R.ROSETTA: an interpretable machine learning framework
Cited by: 15
Author(s): Mateusz Garbulowski, Klev Diamanti, Karolina Smolińska, Nicholas Baltzer, Patricia Stoll, Susanne Bornelöv, Aleksander Øhrn, Lars Feuk, Jan Komorowski
Software Mentions: 7
Published: over 3 years ago

10.2196/21660

Social Media as a Research Tool (SMaaRT) for Risky Behavior Analytics: Methodological Review
Cited by: 10
Author(s): Tavleen Singh, Kirk Roberts, Trevor Cohen, Nathan K. Cobb, Jing Wang, Kayo Fujimoto, Sahiti Myneni
Software Mentions: 7
Published: about 4 years ago

10.2196/14330

Use of Machine Learning Techniques for Case-Detection of Varicella Zoster Using Routinely Collected Textual Ambulatory Records: Pilot Observational Study
Cited by: 5
Author(s): Corrado Lanera, Paola Berchialla, Ileana Baldi, Giulia Lorenzoni, Lara Tramontan, Antonio Scamarcia, Luigi Cantarutti, Carlo Giaquinto, Darío Gregori
Software Mentions: 6
Published: over 4 years ago

10.1186/s12938-017-0416-x

Empirical study of seven data mining algorithms on different characteristics of datasets for biomedical classification applications
Cited by: 37
Author(s): Yiyan Zhang, Yi Xin, Li Qin, Jianshe Ma, Shuai Li, Xiaodan Lv, Weiqi Lv
Software Mentions: 6
Published: about 7 years ago

10.3390/ijms21124367

Machine-Learned Association of Next-Generation Sequencing-Derived Variants in Thermosensitive Ion Channels Genes with Human Thermal Pain Sensitivity Phenotypes
Cited by: 2
Author(s): Jörn Lötsch, Dario Kringel, Gerd Geißlinger, B. Oertel, Eduard Resch, Sebastian Malkusch
Software Mentions: 6
Published: over 4 years ago

10.1186/s12911-019-0929-2

ThalPred: a web-based prediction tool for discriminating thalassemia trait and iron deficiency anemia
Cited by: 18
Author(s): Vishuda Laengsri, Watshara Shoombuatong, W. Adirojananon, Chanin Nantasenamat, Virapong Prachayasittikul, Pornlada Nuchnoi
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0210030

Knowing is half the battle: Assessments of both student perception and performance are necessary to successfully evaluate curricular transformation
Cited by: 9
Author(s): Tarren J. Shaw, Shih-Ping Yang, Troy R. Nash, Rachel M. Pigg, Jeffrey M. Grim
Software Mentions: 5
Published: almost 6 years ago

10.1371/journal.pone.0049475

Characteristics and Predictive Value of Blood Transcriptome Signature in Males with Autism Spectrum Disorders
Cited by: 139
Author(s): Sek Won Kong, Christin Collins, Yuko Shimizu‐Motohashi, Ingrid A. Holm, Malcolm Campbell, In Hee Lee, Stephanie J. Brewster, Ellen Hanson, Heather K. Harris, Kathryn R. Lowe, Adrianna Saada, Andrea L. Mora, Kimberly A. Madison, Rachel Hundley, Jessica Egan, Jill McCarthy, Alal Eran, Michal Galdzicki, Leonard Rappaport, Louis M. Kunkel, Isaac S. Kohane
Software Mentions: 5
Published: almost 12 years ago

10.1155/2013/303982

A Machine-Learned Predictor of Colonic Polyps Based on Urinary Metabolomics
Cited by: 31
Author(s): Roman Eisner, Russell Greiner, Victor Tso, Haili Wang, Richard N. Fedorak
Software Mentions: 5
Published: almost 12 years ago

10.1186/s12864-020-07114-8

Predicting and clustering plant CLE genes with a new method developed specifically for short amino acid sequences
Cited by: 12
Author(s): Zhe Zhang, Lei Liu, Melis Kücükoglu, Dongdong Tian, Robert M. Larkin, Xueping Shi, Bo Zheng
Software Mentions: 5
Published: about 4 years ago

10.1186/1471-2164-15-S7-S4

SNPs selection using support vector regression and genetic algorithms in GWAS
Cited by: 11
Author(s): Fabrízzio Condé de Oliveira, Carlos Cristiano Hasenclever Borges, Fernanda Nascimento Almeida, Fabyano Fonseca e Silva, Rui da Silva Verneque, Marcos Vinícius Gualberto Barbosa da Silva, Wagner Arbex
Software Mentions: 5
Published: about 10 years ago

10.2196/jmir.8344

Artificial Intelligence Learning Semantics via External Resources for Classifying Diagnosis Codes in Discharge Notes
Cited by: 36
Author(s): Chin Lin, Chia-Jung Hsu, Yu-Sheng Lou, Shih-Jen Yeh, Chia-Cheng Lee, Sui-Lung Su, Chen Hc
Software Mentions: 4
Published: about 7 years ago

10.12688/f1000research.9893.2

exprso: an R-package for the rapid implementation of machine learning algorithms
Cited by: 12
Author(s): Thomas P. Quinn, Daniel S. Tylee, Stephen J. Glatt
Software Mentions: 4
Published: almost 7 years ago

10.1371/journal.pone.0036634

Do Natural Proteins Differ from Random Sequences Polypeptides? Natural vs. Random Proteins Classification Using an Evolutionary Neural Network
Cited by: 23
Author(s): Davide De Lucrezia, Debora Slanzi, Irene Poli, Fabio Polticelli, Giovanni Minervini
Software Mentions: 4
Published: over 12 years ago

10.18632/oncotarget.6679

Computational selection of antibody-drug conjugate targets for breast cancer
Cited by: 13
Author(s): François Fauteux, Jonathan D. Hill, María Jaramillo, Youlian Pan, Sieu Phan, Fazel Famili, Maureen D. O'Connor‐McCourt
Software Mentions: 4
Published: almost 9 years ago

10.7717/peerj.11359

Development of an inexpensive matrix-assisted laser desorption—time of flight mass spectrometry method for the identification of endophytes and rhizobacteria cultured from the microbiome associated with maize
Cited by: 7
Author(s): Michael G. LaMontagne, Phi L. Tran, Alexander Benavidez, Lisa Morano
Software Mentions: 4
Published: over 3 years ago

10.1371/journal.pone.0058804

A Small Set of Succinct Signature Patterns Distinguishes Chinese and Non-Chinese HIV-1 Genomes
Cited by: 7
Author(s): Yan Wang, Reda Rawi, Christoph Wilms, Dominik Heider, Rongge Yang, Daniel Hoffmann
Software Mentions: 4
Published: over 11 years ago

10.1186/s12911-020-01180-4

Application of data mining for predicting hemodynamics instability during pheochromocytoma surgery
Cited by: 8
Author(s): Yating Zhao, Fang Li, Lei Cui, Song Bai
Software Mentions: 4
Published: over 4 years ago

10.1371/journal.pone.0125795

Predicting Human Genetic Interactions from Cancer Genome Evolution
Cited by: 18
Author(s): Xiaowen Lu, Wout Megchelenbrink, Richard A. Notebaart, Martijn A. Huynen
Software Mentions: 4
Published: over 9 years ago

10.2196/12443

Identifying Key Target Audiences for Public Health Campaigns: Leveraging Machine Learning in the Case of Hookah Tobacco Smoking
Cited by: 14
Author(s): Kar-Hai Chu, Jason B. Colditz, Momin M. Malik, Tabitha Yates, Brian A. Primack
Software Mentions: 4
Published: over 5 years ago

10.1186/s12864-019-6295-8

Rule-based meta-analysis reveals the major role of PB2 in influencing influenza A virus virulence in mice
Cited by: 4
Author(s): Fransiskus Xaverius Ivan, Chee Keong Kwoh
Software Mentions: 3
Published: about 5 years ago

10.3389/fnsys.2012.00068

Evaluation of Pattern Recognition and Feature Extraction Methods in ADHD Prediction
Cited by: 56
Author(s): João Ricardo Sato, Marcelo Q. Hoexter, André Fujita, Luís Augusto Rohde
Software Mentions: 3
Published: almost 13 years ago

10.1371/journal.pone.0162454

Computational Evaluation of the Strict Master and Random Template Models of Endogenous Retrovirus Evolution
Cited by: 2
Author(s): Fabrícia F. Nascimento, Allen G. Rodrigo
Software Mentions: 2
Published: about 8 years ago

10.1111/cea.12579

Relationship between cytokine expression patterns and clinical outcomes: two population‐based birth cohorts
Cited by: 12
Author(s): Jiakai Wu, Mattia Prosperi, Angela Simpson, Elysia M. Hollams, Peter D. Sly, Adnan Čustović, Patrick G. Holt
Software Mentions: 2
Published: about 9 years ago

10.3389/frai.2019.00029

Longitudinal Analysis of Tactical Strategy in the Men's Division of the Ultimate Fighting Championship
Cited by: 1
Author(s): Lachlan P. James, Alice Sweeting, Vincent G. Kelly, Sam Robertson
Software Mentions: 2
Published: almost 5 years ago

10.1093/gigascience/giy136

Lilikoi: an R package for personalized pathway-based classification modeling using metabolomics data
Cited by: 25
Author(s): Fadhl Alakwaa, Breck Yunits, Sijia Huang, Hassam Alhajaji, Lana X. Garmire
Software Mentions: 2
Published: about 6 years ago

10.1038/s41598-019-46249-x

Establishment and evaluation of prediction model for multiple disease classification based on gut microbial data
Cited by: 29
Author(s): Sohyun Bang, DongAhn Yoo, Soojin Kim, So-Yun Jhang, Seoae Cho, Heebal Kim
Software Mentions: 2
Published: over 5 years ago

10.1038/s41598-020-73644-6

Machine learning-guided discovery and design of non-hemolytic peptides
Cited by: 59
Author(s): Fabien Plisson, Obed Ramírez-Sánchez, Cristina Martínez-Hernández
Software Mentions: 2
Published: about 4 years ago

10.18632/oncotarget.21725

Salivary miRNA panel to detect HPV-positive and HPV-negative head and neck cancer patients
Cited by: 44
Author(s): Yunxia Wan, Dimitrios Vagenas, Carolina Salazar, Lizbeth Kenny, Chris Perry, Diego A. Calvopina, Chamindie Punyadeera
Software Mentions: 2
Published: about 7 years ago

10.1186/1471-2415-15-10

Combining macula clinical signs and patient characteristics for age-related macular degeneration diagnosis: a machine learning approach
Cited by: 35
Author(s): Paolo Fraccaro, Massimo Nicolò, Monica Bonetto, Mauro Giacomini, Peter Weller, Carlo Enrico Traverso, Mattia Prosperi, Dympna O’Sullivan
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0139685

Application of LogitBoost Classifier for Traceability Using SNP Chip Data
Cited by: 13
Author(s): Kwondo Kim, Minseok Seo, Hao Kang, Seoae Cho, Heebal Kim, Kang Seok Seo
Software Mentions: 2
Published: about 9 years ago

10.1371/journal.pone.0197612

A modelling framework based on MDP to coordinate farmers' disease control decisions at a regional scale
Cited by: 3
Author(s): Anne-France Viet, Stéphane Krebs, Olivier Rat-Aspert, Laurent Jeanpierre, Catherine Belloc, Pauline Ezanno
Software Mentions: 1
Published: over 6 years ago

10.1186/s12859-016-1036-3

Automatic learning of pre-miRNAs from different species
Cited by: 6
Author(s): I. de O. N. Lopes, Alexander Schliep, André C. P. L. F. de Carvalho
Software Mentions: 1
Published: over 8 years ago

10.1371/journal.pone.0025363

Content-Based VLE Designs Improve Learning Efficiency in Constructivist Statistics Education
Cited by: 11
Author(s): Patrick Wessa, Antoon De Rycker, Ian Holliday
Software Mentions: 1
Published: about 13 years ago

10.1038/srep13321

MSIseq: Software for Assessing Microsatellite Instability from Catalogs of Somatic Mutations
Cited by: 104
Author(s): Huang Mi, John R. McPherson, Ioana Cutcutache, Bin Tean Teh, Patrick Tan, Steve Rozen
Software Mentions: 1
Published: over 9 years ago

10.3389/fpubh.2021.689967

A Data Science Approach to Estimating the Frequency of Driving Cessation Associated Suicide in the US: Evidence From the National Violent Death Reporting System
Cited by: 6
Author(s): Tomohiro M. Ko, Viktoryia Kalesnikava, David Jurgens, Briana Mezuk
Software Mentions: 1
Published: over 3 years ago

10.18632/oncotarget.13558

The association of variants in <i>PNPLA3</i> and <i>GRP78</i> and the risk of developing hepatocellular carcinoma in an Italian population
Cited by: 16
Author(s): Daniele Balasus, Michael Way, Caterina Fusilli, Tommaso Mazza, Marsha Y. Morgan, Melchiorre Cervello, Lydia Giannitrapani, Maurizio Soresi, Rosalia Agliastro, Manlio Vinciguerra, Giuseppe Montalto
Software Mentions: 1
Published: about 8 years ago

10.1371/journal.pone.0218796

Dropout and transfer paths: What are the risky profiles when analyzing university persistence with machine learning techniques?
Cited by: 19
Author(s): Luis J. Rodríguez‐Muñiz, Ana Bernardo, María Esteban, Irene Dı́az
Software Mentions: 1
Published: over 5 years ago

10.3906/sag-1911-71

Evaluation of brain FDG PET images in temporal lobe epilepsy for lateralization of epileptogenic focus using data mining methods
Cited by: 1
Author(s): Ümit Özgür Akdemir, İrem Çapraz, Seda Gülbahar Ateş, Kerim Şeker, Uğuray Aydos, Gökhan Kurt, Neşe İlgin Karabacak, Lütfiye Özlem Atay, Erhan Bilir
Software Mentions: 1
Published: over 4 years ago

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