Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: Hmisc

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/Hmisc

Harrell Miscellaneous
79 versions
Latest release: 8 months ago
410 dependent packages
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Papers Mentioning Hmisc 1,000

10.3389/fcell.2021.708066
Integrated Chromatin Accessibility and Transcriptome Landscapes of Doxorubicin-Resistant Breast Cancer Cells
Cited by: 15
Author(s): Xuelong Wang, Jizhou Yan, Baiyong Shen, Gang Wei
Software Mentions: 9
Published: almost 3 years ago
10.1186/s12889-018-5041-5
Dairy product consumption and risk of hip fracture: a systematic review and meta-analysis
Cited by: 67
Author(s): Shanshan Bian, Junfeng Hu, Kai Zhang, Yunguo Wang, Miaohui Yu, Jie Ma
Software Mentions: 9
Published: over 6 years ago
10.1371/journal.pone.0134965
Cancer Associated Fibroblasts in Stage I-IIIA NSCLC: Prognostic Impact and Their Correlations with Tumor Molecular Markers
Cited by: 60
Author(s): Thomas K. Kilvaer, Mehrdad Rakaee, Turid Hellevik, Samer Al-Saad, Erna-Elise Paulsen, Roy M. Bremnes, Lill-Tove Busund, Tom Dønnem, Iñigo Martínez
Software Mentions: 9
Published: almost 9 years ago
10.3389/fcell.2021.643603
Developmental Accumulation of Gene Body and Transposon Non-CpG Methylation in the Zebrafish Brain
Cited by: 8
Author(s): Samuel E. Ross, Daniel Hesselson, Ozren Bogdanović
Software Mentions: 9
Published: about 3 years ago
10.1186/s12886-016-0335-9
Systemic confounders affecting serum measurements of omega-3 and -6 polyunsaturated fatty acids in patients with retinal disease
Cited by: 5
Author(s): Anima Bühler, Felicitas Bucher, Michael Augustynik, Jan Wöhrl, Gottfried Martin, Günther Schlunck, Hansjürgen Agostini, Daniel Böhringer, Gerhard Pütz, Andreas Stahl
Software Mentions: 9
Published: over 7 years ago
10.1186/s13071-021-04678-6
A 3-year retrospective analysis of canine intestinal parasites: fecal testing positivity by age, U.S. geographical region and reason for veterinary visit
Cited by: 14
Author(s): Sarah Sweet, Evan Hegarty, Donald J. McCrann, Michael J. Coyne, Dave Kincaid, Donald Szlosek
Software Mentions: 9
Published: about 3 years ago
10.1038/s41598-019-55563-3
RETRACTED ARTICLE: The diagnostic nomogram of platelet-based score models for hepatic alveolar echinococcosis and atypical liver cancer
Cited by: 4
Author(s): Qiancheng Du, Yanyan Wang, Shihao Guan, Chenliang Hu, Mengxuan Li, Ling Zhou, Mengzhao Zhang, Yichong Chen, Xuepeng Mei, Jian Sun, Ying Zhou
Software Mentions: 9
Published: over 4 years ago
10.1371/journal.pone.0192157
Tissue analyses reveal a potential immune-adjuvant function of FAP-1 positive fibroblasts in non-small cell lung cancer
Cited by: 30
Author(s): Thomas K. Kilvaer, Mehrdad Rakaee, Turid Hellevik, Arne Östman, Carina Strell, Roy M. Bremnes, Lill-Tove Busund, Tom Dønnem, Iñigo Martínez-Zubiaurre
Software Mentions: 9
Published: over 6 years ago
10.1038/s41598-017-07880-8
Global mapping of miRNA-target interactions in cattle (Bos taurus)
Cited by: 19
Author(s): Troels K. H. Scheel, Michael J. Moore, Joseph M. Luna, Eiko Nishiuchi, John Fak, Robert B. Darnell, Charles M. Rice
Software Mentions: 9
Published: almost 7 years ago
10.1371/journal.pone.0229169
Verbing nouns and nouning verbs: Using a balanced design provides ERP evidence against “syntax-first” approaches to sentence processing
Cited by: 12
Author(s): Lauren A. Fromont, Karsten Steinhauer, Phaedra Royle
Software Mentions: 9
Published: about 4 years ago
10.3389/fonc.2021.616976
A Nomogram for Preoperative Estimation of Microvascular Invasion Risk in Hepatocellular Carcinoma: Single-Center Analyses With Internal Validation
Cited by: 5
Author(s): Jiarui Yang, Shuguang Zhu, Juanjuan Yong, Xia Long, Xiangjun Qian, Jiawei Yang, Xueqiao Hu, Yuxuan Li, Chusi Wang, Wenguang Peng, Lei Zhang, Meihai Deng, Weidong Pan
Software Mentions: 9
Published: about 3 years ago
10.18632/oncotarget.12360
Prognostic effect of intratumoral neutrophils across histological subtypes of non-small cell lung cancer
Cited by: 45
Author(s): Mehrdad Rakaee, Lill-Tove Busund, Erna-Elise Paulsen, Elin Richardsen, Samer Al-Saad, Sigve Andersen, Tom Dønnem, Roy M. Bremnes, Thomas K. Kilvaer
Software Mentions: 9
Published: over 7 years ago
10.18632/aging.103204
Comparison of prognostic prediction models for rectal gastrointestinal stromal tumor
Cited by: 2
Author(s): Jiaxin Liu, Pei‐Yun Zhou, Zheng Tang, Wei Yuan, Shen Shanshan, Ren Lang, Xing Zhengwen, Yong Fang, Xiaodong Gao, Anwei Xue, Kuntang Shen, Yayi Hou
Software Mentions: 9
Published: almost 4 years ago
10.1080/0886022X.2021.1937220
Dynamics in perioperative neutrophil-to-lymphocyte*platelet ratio as a predictor of early acute kidney injury following cardiovascular surgery
Cited by: 11
Author(s): Yang Li, Zhouping Zou, Yunlu Zhang, Bowen Zhu, Yuping Ning, Bo Shen, Chunsheng Wang, Zhe Luo, Jiacheng Xu, Xiaoqiang Ding
Software Mentions: 9
Published: over 3 years ago
10.3390/ijms22136855
Concentrated Raw Fibers Enhance the Fiber-Degrading Capacity of a Synthetic Human Gut Microbiome
Cited by: 3
Author(s): Alex Steimle, Mareike Neumann, Erica T. Grant, Jonathan D. Turner, Mahesh S. Desai
Software Mentions: 9
Published: almost 3 years ago
10.1371/journal.pone.0243259
Abrupt light transitions in illuminance and correlated colour temperature result in different temporal dynamics and interindividual variability for sensation, comfort and alertness
Cited by: 13
Author(s): Maaike E. Kompier, K.C.H.J. Smolders, Y. Kort
Software Mentions: 9
Published: about 3 years ago
10.1186/s12913-021-06362-y
Variation in restraint use between hospitals: a multilevel analysis of multicentre prevalence measurements in Switzerland and Austria
Cited by: 9
Author(s): Silvia Thomann, Sabine Hahn, Silvia Bauer, Dirk Richter, Sandra Zwakhalen
Software Mentions: 9
Published: about 3 years ago
10.3390/ijms22063200
Identification of Transcriptomic Differences between Lower Extremities Arterial Disease, Abdominal Aortic Aneurysm and Chronic Venous Disease in Peripheral Blood Mononuclear Cells Specimens
Cited by: 4
Author(s): Daniel Zalewski, Karol P Ruszel, Andrzej Stępniewski, Dariusz Gałkowski, Jacek Bogucki, Przemysław Kołodziej, Jolanta Szymańska, Bartosz J. Płachno, Tomasz Zubilewicz, Marcin Feldo, Janusz Kocki, Anna Bogucka‐Kocka
Software Mentions: 9
Published: about 3 years ago
10.1371/journal.pone.0149237
Optimizing Viral Discovery in Bats
Cited by: 35
Author(s): Caroline Young, Kevin J. Olival
Software Mentions: 9
Published: over 8 years ago
10.1371/journal.pmed.1002362
Childhood adiposity and risk of type 1 diabetes: A Mendelian randomization study
Cited by: 86
Author(s): Jenny C Censin, Christoph Nowak, Nicholas Cooper, Peter Bergsten, John A. Todd, Tove Fall
Software Mentions: 9
Published: almost 7 years ago
10.15252/emmm.202012850
Immunodynamics of explanted human tumors for immuno‐oncology
Cited by: 7
Author(s): Agathe Dubuisson, Jean-Eudes Fahrner, Anne-Gaëlle Goubet, Safae Terrisse, Nicolas Voisin, Charles Bayard, Sébastien Lofek, Damien Drubay, Delphine Bredel, Séverine Mouraud, Sandrine Susini, Alexandria P. Cogdill, Lucas Rebuffet, Elise Ballot, Nicolas Jacquelot, Vincent Thomas de Montpréville, Odile Casiraghi, C. Radulescu, Sophie Ferlicot, David J. Figueroa, Sapna Yadavilli, Jeremy D. Waight, Marc Ballas, Axel Hoos, Thomas Condamine, Bastien Parier, C. Gaudillat, Bertrand Routy, François Ghiringhelli, Lisa Derosa, Ingrid Breuskin, Mathieu Rouanne, Fabrice André, C. Lebâcle, H. Baumert, Marie Wislez, Élie Fadel, Isabelle Cremer, Laurence Albigès, Birgit Geoerger, Jean‐Yves Scoazec, Yohann Loriot, Guido Kroemer, Aurélien Marabelle, Mélodie Bonvalet, Laurence Zitvogel
Software Mentions: 9
Published: over 3 years ago
10.3389/fmicb.2018.02711
Land-Use Intensity Rather Than Plant Functional Identity Shapes Bacterial and Fungal Rhizosphere Communities
Cited by: 45
Author(s): Ricardo Schöps, Kezia Goldmann, Katharina Herz, Guillaume Lentendu, Ingo Schöning, Helge Bruelheide, Tesfaye Wubet, François Buscot
Software Mentions: 9
Published: over 5 years ago
10.2196/16442
Quality Awareness and Its Influence on the Evaluation of App Meta-Information by Physicians: Validation Study
Cited by: 8
Author(s): Urs‐Vito Albrecht, Theodor Framke, Ute von Jan
Software Mentions: 9
Published: over 4 years ago
10.1186/s12967-018-1608-2
NPM1 alternative transcripts are upregulated in acute myeloid and lymphoblastic leukemia and their expression level affects patient outcome
Cited by: 13
Author(s): Luiza Handschuh, Paweł Wojciechowski, Maciej Kaźmierczak, Małgorzata Marcinkowska-Swojak, Magdalena Łuczak, Krzysztof Lewandowski, Mieczysław Komarnicki, Jacek Błażewicz, Marek Figlerowicz, Piotr Kozlowski
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pbio.2004045
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates
Cited by: 41
Author(s): Jean-Louis Plouhinec, Sofía Medina-Ruíz, Caroline Borday, Elsa Bernard, Jean-Philippe Vert, Michael B. Eisen, Richard M. Harland, Anne H. Monsoro-Burq
Software Mentions: 9
Published: over 6 years ago
10.7554/eLife.33105
Single-cell RNA-seq reveals hidden transcriptional variation in malaria parasites
Cited by: 152
Author(s): Adam J. Reid, Arthur M. Talman, Hayley M. Bennett, Ana Gomes, Mandy Sanders, Christopher J. R. Illingworth, Oliver Billker, Matthew Berriman, Mara Lawniczak
Software Mentions: 9
Published: about 6 years ago
10.1177/1179546820951793
Carotid Plaque Morphology is Similar in Patients with Reduced and Normal Renal Function
Cited by: 1
Author(s): Caroline Heijl, Fredrik Kahn, Andreas Edsfeldt, Christoffer Tengryd, Jan Nilsson, Isabel Gonçalves
Software Mentions: 9
Published: over 4 years ago
10.1371/journal.pone.0179337
The acoustic repertoire and behavioural context of the vocalisations of a nocturnal dasyurid, the eastern quoll (Dasyurus viverrinus)
Cited by: 5
Author(s): Annalie Dorph, Paul G. McDonald
Software Mentions: 9
Published: almost 7 years ago
10.1080/19490976.2021.1957408
Imbalance of the intestinal virome and altered viral-bacterial interactions caused by a conditional deletion of the vitamin D receptor
Cited by: 14
Author(s): Jilei Zhang, Yongguo Zhang, Yinglin Xia, Jun Sun
Software Mentions: 9
Published: over 3 years ago
10.1186/s13073-020-00731-8
Integrative -omics and HLA-ligandomics analysis to identify novel drug targets for ccRCC immunotherapy
Cited by: 28
Author(s): Anna Reustle, Moreno Di Marco, Carolin Meyerhoff, Annika Nelde, Juliane S. Walz, Stefan Winter, Siahei Kandabarau, Florian Büttner, Mathias Haag, Linus Backert, Daniel J. Kowalewski, Steffen Rausch, Jörg Hennenlotter, Viktoria Stühler, Marcus Scharpf, Falko Fend, Arnulf Stenzl, Hans‐Georg Rammensee, Jens Bedke, Stefan Stevanović, Matthias Schwab, Elke Schaeffeler
Software Mentions: 9
Published: about 4 years ago
10.3389/fgene.2020.570325
Construction of a Nomogram Based on a Hypoxia-Related lncRNA Signature to Improve the Prediction of Gastric Cancer Prognosis
Cited by: 29
Author(s): Qian Chen, Lang Hu, Kaihua Chen
Software Mentions: 9
Published: over 3 years ago
10.1042/BSR20201604
Novel prognostic prediction model constructed through machine learning on the basis of methylation-driven genes in kidney renal clear cell carcinoma
Cited by: 11
Author(s): Weihao Tang, Ying Cao, Xiaoke Ma
Software Mentions: 9
Published: almost 4 years ago
10.3389/fpubh.2021.679406
The Mediating Role of Placental Weight Change in the Association Between Prenatal Exposure to Thallium and Birth Weight: A Prospective Birth Cohort Study
Cited by: 4
Author(s): He Zhou, Xiangrong Sun, Yiding Wang, Yufeng Ye, Hanwei Chen, Qingsong Chen, Guanhao He, Jiaqi Wang, Xin Liu, Moran Dong, Dengzhou Chen, Guimin Chen, Lifang Yuan, Jianpeng Xiao, Jianxiong Hu, Weilin Zeng, Zuhua Rong, Qianqian Zhang, Mengya Zhou, Lingchuan Guo, Yanyun Lv, Jingjie Fan, Yudong Pu, Wenjun Ma, Bo Zhang, Tao Liu
Software Mentions: 9
Published: almost 3 years ago
10.1371/journal.pone.0152747
The Identification of Novel Diagnostic Marker Genes for the Detection of Beer Spoiling Pediococcus damnosus Strains Using the BlAst Diagnostic Gene findEr
Cited by: 32
Author(s): Jürgen Behr, Andreas Geißler, Jonas Schmid, Anja Zehe, Rudi F. Vogel
Software Mentions: 9
Published: about 8 years ago
10.3389/fpls.2021.612843
Development and Validation of Methodology for Estimating Potato Canopy Structure for Field Crop Phenotyping and Improved Breeding
Cited by: 10
Author(s): Filipe Colwell, Jock Souter, Glenn Bryan, Lindsey Compton, Neil Boonham, Ankush Prashar
Software Mentions: 9
Published: over 3 years ago
10.1371/journal.pone.0122002
NOX1 Supports the Metabolic Remodeling of HepG2 Cells
Cited by: 15
Author(s): Katharina Bertram, Cristina-Maria Vâlcu, Michael Weitnauer, Uwe Linne, Agnes Görlach
Software Mentions: 9
Published: about 9 years ago
10.1155/2021/1658403
Development and Evaluation of Nomograms to Predict the Cancer-Specific Mortality and Overall Mortality of Patients with Hepatocellular Carcinoma
Cited by: 8
Author(s): Xiaofeng Ni, Li Ding, Shengjie Dai, Hao Pan, Hongwei Sun, Jian‐Yang Ao, Lei Chen, Heng Kong
Software Mentions: 9
Published: about 3 years ago
10.1002/ece3.7437
Mixing tree species associated with arbuscular or ectotrophic mycorrhizae reveals dual mycorrhization and interactive effects on the fungal partners
Cited by: 14
Author(s): Heike Heklau, Nicole Schindler, François Buscot, Nico Eisenhauer, Olga Ferlian, Luis Daniel Prada-Salcedo, Helge Bruelheide
Software Mentions: 9
Published: about 3 years ago
10.1186/s12885-020-6638-5
Multiple m6A RNA methylation modulators promote the malignant progression of hepatocellular carcinoma and affect its clinical prognosis
Cited by: 33
Author(s): Nanfang Qu, Sanyu Qin, Xuemei Zhang, Xiaotong Bo, Zhengchun Liu, Chao Tan, Guiqiong Wen, Haixing Jiang
Software Mentions: 9
Published: about 4 years ago
10.3389/fmicb.2021.616956
Assembly Processes and Co-occurrence Patterns of Abundant and Rare Bacterial Community in the Eastern Indian Ocean
Cited by: 9
Author(s): Liuyang Li, Laxman Pujari, Chao Wu, Dongyang Huang, Yuqiu Wei, Congcong Guo, Guicheng Zhang, Wenzhe Xu, Haijiao Liu, Xingzhou Wang, Min Wang, Jun Sun
Software Mentions: 9
Published: almost 3 years ago
10.3389/fonc.2020.523327
The Impact of Preoperative Radiomics Signature on the Survival of Breast Cancer Patients With Residual Tumors After NAC
Cited by: 4
Author(s): Ling Zhang, Xinhua Jiang, Xiaoming Xie, Yaopan Wu, Shaoquan Zheng, Wenwen Tian, Xinhua Xie, Li Li
Software Mentions: 8
Published: over 3 years ago
10.1038/s41598-020-59062-8
Sting nematodes modify metabolomic profiles of host plants
Cited by: 4
Author(s): Denis S. Willett, Camila C. Filgueiras, Nicole Benda, Jing Zhang, Kevin E. Kenworthy
Software Mentions: 8
Published: over 4 years ago
10.1111/jcmm.16712
Cytokeratin 5 and cytokeratin 20 inversely correlate with tumour grading in Ta non‐muscle‐invasive bladder cancer
Cited by: 7
Author(s): Tim Muilwijk, Murat Akand, Frank Van der Aa, Vincent De Coninck, Marc Claessens, Robert Hente, Markus Eckstein, Yves Allory, Louis Libbrecht, Steven Joniau, Thomas Gevaert
Software Mentions: 8
Published: almost 3 years ago
10.3389/fonc.2021.633995
A Nomogram for Predicting Multiple Metastases in Metastatic Colorectal Cancer Patients: A Large Population-Based Study
Cited by: 7
Author(s): Yuhang Ge, Renshen Xiang, Jun Ren, Wei Song, Wei Lu, Tao Fu
Software Mentions: 8
Published: about 3 years ago
10.1371/journal.pone.0192604
Apolipoprotein E genotype does not moderate the associations of depressive symptoms, neuroticism and allostatic load with cognitive ability and cognitive aging in the Lothian Birth Cohort 1936
Cited by: 6
Author(s): Zander Crook, Tom Booth, Simon R. Cox, Janie Corley, Dominika Dykiert, Paul Redmond, Alison Pattie, Adele M. Taylor, Sarah E. Harris, John M. Starr, Ian J. Deary
Software Mentions: 8
Published: over 6 years ago
10.3390/jcm9051251
Dysregulations of MicroRNA and Gene Expression in Chronic Venous Disease
Cited by: 12
Author(s): Daniel Zalewski, Karol P Ruszel, Andrzej Stępniewski, Dariusz Gałkowski, Jacek Bogucki, Łukasz Komsta, Przemysław Kołodziej, Paulina Chmiel, Tomasz Zubilewicz, Marcin Feldo, Janusz Kocki, Anna Bogucka‐Kocka
Software Mentions: 8
Published: about 4 years ago
10.1186/s12866-020-1716-z
Repeated inoculation with fresh rumen fluid before or during weaning modulates the microbiota composition and co-occurrence of the rumen and colon of lambs
Cited by: 31
Author(s): Shaobo Yu, Guangyu Zhang, Zhibo Liu, Peng Wu, Zhongtang Yu, Jiakun Wang
Software Mentions: 8
Published: over 4 years ago
10.3389/fneur.2019.01060
Notification Strategy and Predictors of Outcome in Stroke Ineligible for Reperfusion Therapies
Cited by: 2
Author(s): Ágnes Mirolovics, Magdolna Bokor, Balázs Dobi, Judit Zsuga, Dániel Bereczki
Software Mentions: 8
Published: over 4 years ago
10.1038/s41598-017-12783-9
Bagging Nearest-Neighbor Prediction independence Test: an efficient method for nonlinear dependence of two continuous variables
Cited by: 3
Author(s): Yi Wang, Yi Li, Xiaoyu Liu, Weilin Pu, Xiaofeng Wang, Jiucun Wang, Momiao Xiong, Yin Yao Shugart, Li Jin
Software Mentions: 8
Published: over 6 years ago
10.1186/s12920-021-01079-7
Lung disease network reveals impact of comorbidity on SARS-CoV-2 infection and opportunities of drug repurposing
Cited by: 4
Author(s): Asim Bikas Das
Software Mentions: 8
Published: over 2 years ago
10.3389/fmolb.2019.00005
Alternative Splicing of MXD3 and Its Regulation of MXD3 Levels in Glioblastoma
Cited by: 10
Author(s): Tin Ngo, Abraham Corrales, Traci Bourne, Samir Elmojahid, Kit S. Lam, Elizabeth Díaz
Software Mentions: 8
Published: about 5 years ago
10.3389/fmolb.2021.675198
A High Epigenetic Risk Score Shapes the Non-Inflamed Tumor Microenvironment in Breast Cancer
Cited by: 1
Author(s): Dong Zhang, Yingnan Wang, Qifeng Yang
Software Mentions: 8
Published: almost 3 years ago
10.1128/Spectrum.00536-21
Mild and Severe SARS-CoV-2 Infection Induces Respiratory and Intestinal Microbiome Changes in the K18-hACE2 Transgenic Mouse Model
Cited by: 16
Author(s): Brittany Seibert, C. Joaquín Cáceres, Stivalis Cárdenas-García, Silvia Carnaccini, Ginger Geiger, Daniela S. Rajão, Elizabeth A. Ottesen, Daniel R. Pérez
Software Mentions: 8
Published: over 2 years ago
10.1007/s00259-020-04864-1
A CT-based radiomics model to detect prostate cancer lymph node metastases in PSMA radioguided surgery patients
Cited by: 25
Author(s): Jan C. Peeken, Mohamed A. Shouman, Markus Kroenke, Isabel Rauscher, Tobias Maurer, Jürgen E. Gschwend, Matthias Eiber, Stephanie E. Combs
Software Mentions: 8
Published: almost 4 years ago
10.1155/2021/9048375
Nomograms for Predicting Prognosis of Primary Mediastinal Seminoma: A Population-Based Study
Cited by: 2
Author(s): Weining Huang, Jingwen Luo, Xianghong Zhou, Ying Zhao, Tao Zhang, Xuelei Ma
Software Mentions: 8
Published: about 3 years ago
10.3389/fmicb.2020.01327
Microbial and Geochemical Dynamics of an Aquifer Stimulated for Microbial Induced Calcite Precipitation (MICP)
Cited by: 11
Author(s): Juliette Ohan, Sina Saneiyan, J. Lee, Andrew W. Bartlow, Dimitrios Ntarlagiannis, Susan E. Burns, Frederick S. Colwell
Software Mentions: 8
Published: almost 4 years ago
10.1523/JNEUROSCI.2146-20.2020
Unexpected Role of Physiological Estrogen in Acute Stress-Induced Memory Deficits
Cited by: 19
Author(s): Rachael E. Hokenson, Annabel K. Short, Yuncai Chen, Aidan L Pham, Emily T. Adams, Jessica L. Bolton, Vivek Swarup, Christine M. Gall, Tallie Z. Baram
Software Mentions: 8
Published: over 3 years ago
10.1002/ece3.5940
Hollow oaks and beetle functional diversity: Significance of surroundings extends beyond taxonomy
Cited by: 11
Author(s): Ross Wetherbee, Tone Birkemoe, Olav Skarpaas, Anne Sverdrup‐Thygeson
Software Mentions: 8
Published: over 4 years ago
10.1007/s11306-017-1284-x
Metabolomic analysis of tomato seed germination
Cited by: 31
Author(s): Rashid H. Kazmi, Leo A.J. Willems, Ronny V.L. Joosen, Naveed Ahmad Khan, Wilco Ligterink, Henk W. M. Hilhorst
Software Mentions: 8
Published: over 6 years ago
10.18632/oncotarget.16664
MiRNA profiling of gastrointestinal stromal tumors by next-generation sequencing
Cited by: 31
Author(s): Ugnė Gyvytė, Simonas Juzėnas, Violeta Šaltenienė, Juozas Kupčinskas, Lina Poškienė, Laimutis Kučinskas, Sonata Jarmalaitė, Kristina Stuopelytė, Rūta Steponaitienė, Georg Hemmrich-Stanisak, Matthias Hübenthal, Alexander Link, Sabine Franke, André Franke, Dalia Pangonytė, Vaiva Lesauskaitė, Limas Kupčinskas, Jurgita Skiecevičienė
Software Mentions: 8
Published: about 7 years ago
10.3390/microorganisms9091943
Fungi in Permafrost-Affected Soils of the Canadian Arctic: Horizon- and Site-Specific Keystone Taxa Revealed by Co-Occurrence Network
Cited by: 6
Author(s): Milan Varsadiya, Tim Urich, Gustaf Hugelius, Jiří Bárta
Software Mentions: 8
Published: over 2 years ago
10.7554/eLife.65508
Seroconversion stages COVID19 into distinct pathophysiological states
Cited by: 36
Author(s): Matthew D. Galbraith, Kohl T Kinning, Kelly D. Sullivan, Ryan M. Baxter, Paula Araya, Kimberly R. Jordan, Seth Russell, Keith P Smith, Ross E Granrath, Jessica Shaw, Monika Dzieciątkowska, Tusharkanti Ghosh, Andrew A. Monte, Angelo D’Alessandro, Kirk C. Hansen, Tellen D Benett, Elena W.Y. Hsieh, Joaquín M. Espinosa
Software Mentions: 8
Published: about 3 years ago
10.7150/ijms.47073
A Novel Nomogram Predicting Distant Metastasis in T1 and T2 Gallbladder Cancer: A SEER-based Study
Cited by: 10
Author(s): Yulong Cai, Yixin Lin, Lingjun Jiang, Hui Ye, Fuyu Li, Nan‐Sheng Cheng
Software Mentions: 8
Published: over 4 years ago
10.1038/s41396-020-0621-7
Spatiotemporal dynamics of the archaeal community in coastal sediments: assembly process and co-occurrence relationship
Cited by: 120
Author(s): Jiwen Liu, Shangqing Zhu, Xiaoyue Liu, Peng Yao, Tiantian Ge, Xiao‐Hua Zhang
Software Mentions: 8
Published: about 4 years ago
10.1371/journal.pmed.1003413
Body mass index and risk of dying from a bloodstream infection: A Mendelian randomization study
Cited by: 14
Author(s): Tormod Rogne, Erik Solligård, Stephen Burgess, Ben Brumpton, Julie Paulsen, Hallie C. Prescott, Randi Marie Mohus, Lise Tuset Gustad, Arne Mehl, Bjørn Olav Åsvold, Andrew T. DeWan, Jan Kristian Damås
Software Mentions: 8
Published: over 3 years ago
10.1038/s41396-018-0279-6
Bacterial contributions to delignification and lignocellulose degradation in forest soils with metagenomic and quantitative stable isotope probing
Cited by: 228
Author(s): Roland C. Wilhelm, Rahul Singh, Lindsay D. Eltis, William W. Mohn
Software Mentions: 8
Published: over 5 years ago
10.3390/microorganisms9061153
Variation in Human Milk Composition Is Related to Differences in Milk and Infant Fecal Microbial Communities
Cited by: 30
Author(s): Ryan M. Pace, Janet E. Williams, Bianca Robertson, Kimberly A. Lackey, Courtney L. Meehan, William J. Price, James A. Foster, Daniel Sellen, Elizabeth Kamau-Mbuthia, Egidioh W. Kamundia, Samwel Mbugua, Sophie E. Moore, Andrew M. Prentice, Debela G. Kita, Linda J. Kvist, Gloria E. Otoo, Lorena Ruíz, Juan M. Rodríguez, Rossina G. Pareja, Mark A. McGuire, Lars Bode, Michelle K. McGuire
Software Mentions: 8
Published: almost 3 years ago
10.1093/aobpla/plaa019
Genetic variation in early fitness traits across European populations of silver birch (Betula pendula)
Cited by: 7
Author(s): Aida Solé-Medina, Katrin Heer, Lars Opgenoorth, Phillip Kaldewey, Darius Danusevičius, Eduardo Notivol, Juan J. Robledo‐Arnuncio, José Alberto Ramírez‐Valiente
Software Mentions: 8
Published: about 4 years ago
10.18332/tid/105846
Dispositional mindfulness, affect and tobacco dependence among treatment naive cigarette smokers in Brazil
Cited by: 2
Author(s): Isabel Weiss de Souza, Elisa Harumi Kozasa, Luane Araújo Rabello, Beatriz Mattozo, Sarah Bowen, Kimber P. Richter, Laisa Marcorela Andreoli Sartes, Ana Regina Noto
Software Mentions: 8
Published: about 5 years ago
10.1186/s40168-021-01140-8
Single-colony sequencing reveals microbe-by-microbiome phylosymbiosis between the cyanobacterium Microcystis and its associated bacteria
Cited by: 18
Author(s): Olga María Pérez-Carrascal, Nicolas Tromas, Yves Terrat, Elisa Moreno, Alessandra Giani, Laísa Corrêa Braga Marques, Nathalie Fortin, Ben Shapiro
Software Mentions: 8
Published: over 2 years ago
10.7717/peerj.12070
Prognostic impact of a lymphocyte activation-associated gene signature in GBM based on transcriptome analysis
Cited by: 1
Author(s): Yujia Lan, Erjie Zhao, Xinxin Zhang, Xiaojing Zhu, Linyun Wan, Aditya Suru, Yanyan Ping, Yihan Wang
Software Mentions: 8
Published: over 2 years ago
10.3390/genes10110875
The Role of Plasticity and Adaptation in the Incipient Speciation of a Fire Salamander Population
Cited by: 6
Author(s): Joana Sabino‐Pinto, Daniel J. Goedbloed, Eugenia Sanchez, Thomas Czypionka, Arne W. Nolte, Sebastian Steinfartz
Software Mentions: 8
Published: over 4 years ago
10.3399/bjgp20X713981
Association of prior lymphopenia with mortality in pneumonia: a cohort study in UK primary care
Cited by: 6
Author(s): Fergus Hamilton, David Arnold, Rupert Payne
Software Mentions: 8
Published: over 3 years ago
10.1371/journal.pone.0248628
TriatoDex, an electronic identification key to the Triatominae (Hemiptera: Reduviidae), vectors of Chagas disease: Development, description, and performance
Cited by: 6
Author(s): Rodrigo Gurgel-Gonçalves, Fernando Abad‐Franch, Maxwell Ramos de Almeida, Marcos Takashi Obara, Rita de Cássia Moreira de Souza, Jainaine Abrantes de Sena Batista, Douglas de Almeida Rocha
Software Mentions: 8
Published: about 3 years ago
10.7717/peerj.705
Lung cancer incidence decreases with elevation: evidence for oxygen as an inhaled carcinogen
Cited by: 26
Author(s): Kamen P. Simeonov, Daniel S. Himmelstein
Software Mentions: 8
Published: over 9 years ago
10.1002/ctm2.20
Nomograms for predicting specific distant metastatic sites and overall survival of colorectal cancer patients: A large population‐based real‐world study
Cited by: 26
Author(s): Shaobo Mo, Xin Cai, Zheng Zhou, Yaqi Li, Xiang Hu, Xiaolong Ma, Long Zhang, Sanjun Cai, Junjie Peng
Software Mentions: 8
Published: about 4 years ago
10.1007/s00122-020-03667-0
Differential expression of transcription factor- and further growth-related genes correlates with contrasting cluster architecture in Vitis vinifera ‘Pinot Noir’ and Vitis spp. genotypes
Cited by: 6
Author(s): Robert Richter, Susanne Rossmann, Doreen Gabriel, Reinhard Töpfer, Klaus Theres, Eva Zyprian
Software Mentions: 8
Published: almost 4 years ago
10.3390/biomedicines9091253
Alterations in Circulating Monocytes Predict COVID-19 Severity and Include Chromatin Modifications Still Detectable Six Months after Recovery
Cited by: 24
Author(s): Alberto Utrero‐Rico, Cecilia González-Cuadrado, Marta Chivite-Lacaba, Óscar Cabrera-Marante, Rocío Laguna‐Goya, Patricia Almendro-Vázquez, Carmen Díaz-Pedroche, María Ruiz-Ruigómez, Antonio Lalueza, María Dolores Folgueira, Enrique Vázquez, Ana Quintas, Marcos J. Berges-Buxeda, Moisés Martín-Rodriguez, Ana Dopazo, Antonio Serrano-Hernández, Estela Paz‐Artal, Estela Paz‐Artal
Software Mentions: 8
Published: over 2 years ago
10.3389/fgene.2019.00278
Identification of Prognostic Alternative Splicing Signature in Breast Carcinoma
Cited by: 25
Author(s): Dong Zhang, Yi Duan, Jinjing Cun, Qifeng Yang
Software Mentions: 8
Published: about 5 years ago
10.3389/fpsyg.2021.601679
Computational Language Assessments of Harmony in Life — Not Satisfaction With Life or Rating Scales — Correlate With Cooperative Behaviors
Cited by: 7
Author(s): Oscar Kjell, Daiva Daukantaité, Sverker Sikström
Software Mentions: 8
Published: about 3 years ago
10.1038/s41418-021-00817-9
Prolonged SARS-CoV-2 RNA virus shedding and lymphopenia are hallmarks of COVID-19 in cancer patients with poor prognosis
Cited by: 27
Author(s): Anne-Gaëlle Goubet, Agathe Dubuisson, Arthur Géraud, F-X. Danlos, Safae Terrisse, Carolina Alves Costa Silva, Damien Drubay, Lea Touri, Marion Picard, Marine Mazzenga, Aymeric Silvin, Garett Dunsmore, Yacine Haddad, Eugénie Pizzato, Pierre Ly, Caroline Flament, Cléa Melenotte, Éric Solary, Michaëla Fontenay, Gabriel Garcia, Corinne Balleyguier, Nathalie Lassau, Markus Maeurer, Claudia Grajeda‐Iglesias, Nitharsshini Nirmalathasan, Fanny Aprahamian, Sylvère Durand, Oliver Kepp, Gladys Ferrere, Cassandra Thelemaque, Imran Lahmar, Jean Eudes Fahrner, Lydia Meziani, Abdelhakim Ahmed–Belkacem, Nadia Saïdani, Bernard La Scola, Didier Raoult, Stéphanie Gentile, Sébastien Cortaredona, Giuseppe Ippolito, Benjamin Lelouvier, Alain Roulet, Fabrice André, Fabrice Barlési, Jean Charles Soria, Caroline Pradon, Emmanuelle Gallois, Fanny Pommeret, Emeline Colomba, Florent Ginhoux, Suzanne Kazandjian, Arielle Elkrief, Bertrand Routy, Makoto Miyara, Guy Gorochov, Éric Deutsch, Laurence Albigès, Annabelle Stoclin, Bertrand Gachot, Anne Florin, Mansouria Merad, Florian Scotté, Souad Assaad, Guido Kroemer, Jean Yves Blay, Aurélien Marabelle, Frank Griscelli, Laurence Zitvogel, Lisa Derosa
Software Mentions: 8
Published: almost 3 years ago
10.1186/s40168-019-0630-9
Environmental filtering drives distinct continental atlases of soil archaea between dryland and wetland agricultural ecosystems
Cited by: 103
Author(s): Shuo Jiao, Ye Xu, Jie Zhang, Yahai Lu
Software Mentions: 8
Published: over 5 years ago
10.18632/aging.102513
Daily decrease of post-operative alpha-fetoprotein by 9% discriminates prognosis of HCC: A multicenter retrospective study
Cited by: 6
Author(s): Pei‐Yun Zhou, Chao‐Ping Yang, Zheng Tang, Yong Yi, Wei‐Ren Liu, Min Tian, Huang Ji, Wei Gan, Xi‐Fei Jiang, Liu Gao, Han Wang, Chenyang Tao, Yuan Fang, Wei‐Feng Qu, Cheng Zhou, Ruijuan Guan, Bao-Ye Sun, Yu‐Fu Zhou, Shushu Song, Zhen‐Bin Ding, Yuan‐Fei Peng, Zhi Dai, Jian Zhou, Jia Fan, Guozhong Gong, Ying‐Hong Shi, Shuang–Jian Qiu
Software Mentions: 8
Published: over 4 years ago
10.1186/s40168-017-0339-6
Metagenomic characterization of ambulances across the USA
Cited by: 29
Author(s): Niamh B. O’Hara, Harry J. Reed, Ebrahim Afshinnekoo, Donell Harvin, Nora Caplan, Gail Rosen, Brook Frye, Stephen Woloszynek, Rachid Ounit, Shawn Levy, Erin Butler, Christopher E. Mason
Software Mentions: 8
Published: over 6 years ago
10.3390/e23060695
Knowledge Discovery from Medical Data and Development of an Expert System in Immunology
Cited by: 3
Author(s): Małgorzata Pac, Irina Mikutskaya, Jan J. Mulawka
Software Mentions: 8
Published: almost 3 years ago
10.1128/mBio.00925-19
A Robust Phylogenomic Time Tree for Biotechnologically and Medically Important Fungi in the Genera <i>Aspergillus</i> and <i>Penicillium</i>
Cited by: 95
Author(s): Jacob L. Steenwyk, Xing‐Xing Shen, Abigail Lind, Gustavo H. Goldman, Antonis Rokas
Software Mentions: 8
Published: over 4 years ago
10.1371/journal.pone.0234190
Positive attitudes towards feline obesity are strongly associated with ownership of obese cats
Cited by: 2
Author(s): Kendy Tzu-Yun Teng, Paul McGreevy, Jenny‐Ann L.M.L. Toribio, Navneet K. Dhand
Software Mentions: 7
Published: almost 4 years ago
10.1186/s40478-020-01020-6
Innate immune response in neuronopathic forms of Gaucher disease confers resistance against viral-induced encephalitis
Cited by: 7
Author(s): Sharon Melamed, Roy Avraham, Deborah E. Rothbard, Noam Erez, Tomer Israely, Ziv Klausner, Anthony H. Futerman, Nir Paran, Einat B. Vitner
Software Mentions: 7
Published: over 3 years ago
10.1038/s41598-020-73338-z
Mid-infrared spectroscopic screening of metabolic alterations in stress-exposed gilthead seabream (Sparus aurata)
Cited by: 4
Author(s): Cláudia Raposo de Magalhães, Raquel Carrilho, Denise Schrama, Marco Cerqueira, Ana M. Rosa da Costa, Pedro M. Rodrigues
Software Mentions: 7
Published: over 3 years ago
10.1186/1471-2369-15-84
Incidence and consequence of acute kidney injury in unselected emergency admissions to a large acute UK hospital trust
Cited by: 60
Author(s): Rachael Challiner, James Ritchie, Catherine Fullwood, Paul Loughnan, Alastair J. Hutchison
Software Mentions: 7
Published: almost 10 years ago
10.1007/s13304-020-00883-7
Factors predicting survival in patients with locally advanced pancreatic cancer undergoing pancreatectomy with arterial resection
Cited by: 11
Author(s): Niccolò Napoli, Emanuele Federico Kauffmann, Concetta Cacace, Francesca Menonna, Davide Caramella, Carla Cappelli, Daniela Campani, Andrea Cacciato Insilla, Enrico Vasile, Caterina Vivaldi, Lorenzo Fornaro, G Amorese, Fabio Vistoli, Ugo Boggi
Software Mentions: 7
Published: over 3 years ago
10.1186/s40462-020-00233-7
Urban specialization reduces habitat connectivity by a highly mobile wading bird
Cited by: 7
Author(s): Claire S. Teitelbaum, Jeffrey Hepinstall‐Cymerman, Anjelika Kidd-Weaver, Sonia M. Hernández, Sonia Altizer, Richard J. Hall
Software Mentions: 7
Published: over 3 years ago
10.3390/ani11051442
Agricultural Holdings and Slaughterhouses’ Impact on Patterns of Pathological Findings Observed during Post-Mortem Meat Inspection
Cited by: 5
Author(s): Johannes Klinger, Beate Conrady, Marina Mikula, Annemarie Käsbohrer
Software Mentions: 7
Published: about 3 years ago
10.1007/s00426-020-01314-3
Affective states influence emotion perception: evidence for emotional egocentricity
Cited by: 16
Author(s): Irene Trilla, Anne Weigand, Isabel Dziobek
Software Mentions: 7
Published: about 4 years ago
10.1098/rsos.160293
Reflections of the social environment in chimpanzee memory: applying rational analysis beyond humans
Cited by: 5
Author(s): Jeffrey R. Stevens, Julian N. Marewski, Lael J. Schooler, Ian C. Gilby
Software Mentions: 7
Published: almost 8 years ago
10.3389/fneur.2019.00102
Acute Endovascular Treatment of Patients With Ischemic Stroke From Intracranial Large Vessel Occlusion and Extracranial Carotid Dissection
Cited by: 20
Author(s): Kars C.J. Compagne, Robert‐Jan B. Goldhoorn, Maarten Uyttenboogaart, Robert J. van Oostenbrugge, Wim H. van Zwam, Pieter Jan van Doormaal, Diederik W.J. Dippel, Aad van der Lugt, Bart J. Emmer, Adriaan C.G.M. van Es
Software Mentions: 7
Published: about 5 years ago
10.1186/s40462-015-0049-2
Summing the strokes: energy economy in northern elephant seals during large-scale foraging migrations
Cited by: 33
Author(s): JL Maresh, Taiki Adachi, Akinori Takahashi, Yoshiro Naito, DE Crocker, Markus Horning, T. M. Williams, Daniel P. Costa
Software Mentions: 7
Published: over 8 years ago
10.1111/eva.12724
Hybridization rate and hybrid fitness for <i>Camelina microcarpa</i> Andrz. ex DC (♀) and <i>Camelina sativa</i> (L.) Crantz(Brassicaceae) (♂)
Cited by: 19
Author(s): Sara L. Martin, Beatriz Lujan-Toro, Connie A. Sauder, Tracey James, Sara Ohadi, Linda M. Hall
Software Mentions: 7
Published: over 5 years ago
10.1371/journal.pone.0130659
The Biogeography of Putative Microbial Antibiotic Production
Cited by: 13
Author(s): Hélène Morlon, Timothy K. O’Connor, Jessica A. Bryant, Louise K. Charkoudian, Kathryn M. Docherty, E. B. Gareth Jones, Steven W. Kembel, Jessica L. Green, Brendan J. M. Bohannan
Software Mentions: 7
Published: almost 9 years ago
10.1007/s00248-018-1209-x
Rapid Microbial Community Changes During Initial Stages of Pine Litter Decomposition
Cited by: 35
Author(s): Marcin Gołębiewski, Agata Tarasek, Marcin Sikora, Edyta Deja-Sikora, Andrzej Tretyn, Maria Niklińska
Software Mentions: 7
Published: almost 6 years ago