Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pbio.2004045

https://doi.org/10.1371/journal.pbio.2004045

Cited by: 41
Author(s): Jean-Louis Plouhinec, Sofía Medina-Ruíz, Caroline Borday, Elsa Bernard, Jean-Philippe Vert, Michael B. Eisen, Richard M. Harland, Anne H. Monsoro-Burq
Published: over 6 years ago

Software Mentions 9

bioconductor: clusterProfiler

A universal enrichment tool for interpreting omics data
Papers that mentioned: 2,223

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

cran: Hmisc

Harrell Miscellaneous
Papers that mentioned: 1,000

cran: networkD3

D3 JavaScript Network Graphs from R
Papers that mentioned: 37

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: analysis

Source code analysis of Python programs
Papers that mentioned: 2,036

pypi: cufflinks

Productivity Tools for Plotly + Pandas
Papers that mentioned: 415

pypi: HTSeq

A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071

pypi: stats

Calculator-style statistical functions
Papers that mentioned: 3,105