Scientific Papers with Software Mentions

10.1371/journal.pone.0250045

Results from a malaria indicator survey highlight the importance of routine data capture in high-risk forest and farm transmission sites in Vietnam to tailor location-specific malaria elimination interventions
Cited by: 2
Author(s): Thang Ngo, Sara E. Canavati, Dang Viet Dung, Thuan Huu Vo, Duong Thanh Tran, Long Khanh Tran, Rosalie J. Whedbee, Ekaterina Milgotina, Gerard C. Kelly, Kimberly A. Edgel, Nicholas J. Martin
Software Mentions: 4
Published: over 5 years ago

10.7717/peerj.8468

Survival of side grafts with scions from pure species Pinus engelmannii Carr. and the P. engelmannii × P. arizonica Engelm. var. arizonica hybrid
Cited by: 8
Author(s): Alberto Pérez-Luna, Christian Wehenkel, José Ángel Prieto-Ruíz, Javier López-Upton, José Ciro Hernández-Díaz
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0192249

The invasive Red-vented bulbul (Pycnonotus cafer) outcompetes native birds in a tropical biodiversity hotspot
Cited by: 8
Author(s): Martin Thibault, Éric Vidal, Murray A. Potter, Thierry Sanchez, Fabrice Brescia
Software Mentions: 4
Published: over 8 years ago

10.3389/fpls.2018.01596

Organic Nitrogen Uptake and Assimilation in Cucumis sativus Using Position-Specific Labeling and Compound-Specific Isotope Analysis
Cited by: 15
Author(s): Pierre-Paul Dion, Sandra Jämtgård, Annick Bertrand, Steeve Pépin, Martine Dorais
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0133660

GDSCalc: A Web-Based Application for Evaluating Discrete Graph Dynamical Systems
Cited by: 6
Author(s): Sherif H. Elmeligy Abdelhamid, Chris J. Kuhlman, Madhav V. Marathe, Henning S. Mortveit, S. S. Ravi
Software Mentions: 4
Published: almost 11 years ago

10.12688/f1000research.13254.2

Simulation and visualization of multiple KEGG pathways using BioNSi
Cited by: 2
Author(s): Adva Yeheskel, Adam Reiter, Metsada Pasmanik‐Chor, Amir Rubinstein
Software Mentions: 4
Published: about 8 years ago

10.1186/s12864-015-1964-8

A genetic framework for H2O2 induced cell death in Arabidopsis thaliana
Cited by: 40
Author(s): Eve Kaurilind, Enjun Xu, Mikael Brosché
Software Mentions: 4
Published: almost 11 years ago

10.1007/s10389-021-01543-9

COVID-19: the relationship between perceptions of risk and behaviours during lockdown
Cited by: 11
Author(s): Richard Brown, Lynne Coventry, Gillian Pepper
Software Mentions: 4
Published: about 5 years ago

10.1186/s12877-018-0834-z

Item distribution and inter-rater reliability of the German version of the quality of life in Alzheimer’s disease scale (QoL-AD) proxy for people with dementia living in nursing homes
Cited by: 13
Author(s): Martin N. Dichter, Eva-Maria Wolschon, Christian Schwab, Gabriele Meyer, Sascha Köpke
Software Mentions: 4
Published: about 8 years ago

10.1186/s12891-018-2287-0

Intra and interrater reliability and clinical feasibility of a simple measure of cervical movement sense in patients with neck pain
Cited by: 17
Author(s): Isabelle M. Werner, Markus Ernst, Julia Treleaven, Rebecca Crawford
Software Mentions: 4
Published: almost 8 years ago

10.1007/s00428-021-03070-0

Histological interpretation of differentiated vulvar intraepithelial neoplasia (dVIN) remains challenging—observations from a bi-national ring-study
Cited by: 11
Author(s): Shatavisha Dasgupta, Elf de Jonge, Mieke Van Bockstal, Luthy S M Wong-Alcala, Suzanne Wilhelmus, Lex A C F Makkus, Katrien Schelfout, Koen K. Van de Vijver, Sander H. J. Smits, Étienne Marbaix, Senada Koljenović, Folkert J. van Kemenade, Patricia C. Ewing‐Graham
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0187500

The prognostic value of CT radiomic features for patients with pulmonary adenocarcinoma treated with EGFR tyrosine kinase inhibitors
Cited by: 23
Author(s): Hyungjin Kim, Chang Min Park, Bhumsuk Keam, Sang Joon Park, Mi So Kim, Tae Min Kim, Dong-Wan Kim, Dae Seog Heo, Jin Mo Goo
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pone.0250099

Social dominance and multiple dimensions of psychopathology: An experimental test of reactivity to leadership and subordinate roles
Cited by: 1
Author(s): Sheri L. Johnson, Benjamin A. Swerdlow, Jordan A. Tharp, Serena Chen, Jennifer L. Tackett, Jamie M. Zeitzer
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0131333

Speeding Up Non-Parametric Bootstrap Computations for Statistics Based on Sample Moments in Small/Moderate Sample Size Applications
Cited by: 2
Author(s): Elias Chaibub Neto
Software Mentions: 4
Published: about 11 years ago

10.1371/journal.pone.0231840

Commercial integrated crop-livestock systems achieve comparable crop yields to specialized production systems: A meta-analysis
Cited by: 37
Author(s): Caitlin A. Peterson, Leonardo Deiss, Amélie C. M. Gaudin
Software Mentions: 4
Published: over 6 years ago

10.1371/journal.pone.0196742

Optimizing biomass estimates of savanna woodland at different spatial scales in the Brazilian Cerrado: Re-evaluating allometric equations and environmental influences
Cited by: 23
Author(s): Isaac Roitman, Mercedes M. C. Bustamante, Ricardo Flores Haidar, Julia Shimbo, Guilherme C. Abdala, George Eiten, Christopher William Fagg, Maria Cristina Felfili, Jeanine Maria Felfili, Tamiel Khan Baiocchi Jacobson, Galiana S. Lindoso, Michael Keller, Eddie Lenza, Sabrina do Couto de Miranda, José Roberto Rodrigues Pinto, Ariane de Almeida Rodrigues, Wellington Braz Carvalho Delitti, Pedro Roitman, Jhames Matos Sampaio
Software Mentions: 4
Published: about 8 years ago

10.1371/journal.pone.0076070

Lineage-Specific Responses of Tooth Shape in Murine Rodents (Murinae, Rodentia) to Late Miocene Dietary Change in the Siwaliks of Pakistan
Cited by: 24
Author(s): Yuri Kimura, Louis L. Jacobs, Lawrence J. Flynn
Software Mentions: 4
Published: almost 13 years ago

10.3389/fonc.2020.01335

A Novel Prognostic Scoring System Integrating Gene Expressions and Clinicopathological Characteristics to Predict Very Early Relapse in Node-Negative Estrogen Receptor-Positive/HER2-Negative Breast Cancer
Cited by: 2
Author(s): Caijin Lin, Jiayi Wu, Lin Lin, Xiaochun Fei, Xiaosong Chen, Ou Huang, Jianxing He, Weiguo Chen, Yafen Li, Kunwei Shen, Li Zhu
Software Mentions: 4
Published: almost 6 years ago

10.1534/g3.120.401578

Low Base-Substitution Mutation Rate but High Rate of Slippage Mutations in the Sequence Repeat-Rich Genome of Dictyostelium discoideum
Cited by: 8
Author(s): Sibel Küçükyıldırım, Megan G Behringer, Way Sung, Debra A. Brock, Thomas G. Doak, Hatıce Mergen, David C. Queller, Joan E. Strassmann, Michael Lynch
Software Mentions: 4
Published: almost 6 years ago

10.1007/s00167-016-4204-0

Tunnel widening in single- versus double-bundle anterior cruciate ligament reconstructed knees
Cited by: 40
Author(s): Cathrine Aga, Katharine J. Wilson, Steinar Johansen, Grant J. Dornan, Robert F. La Prade, Lars Engebretsen
Software Mentions: 4
Published: about 10 years ago

10.1038/s41598-018-34858-x

SEPROGADIC – serum protein-based gastric cancer prediction model for prognosis and selection of proper adjuvant therapy
Cited by: 7
Author(s): Hee-Sung Ahn, Tae Sung Sohn, Mi Jeong Kim, Byoung-Kyu Cho, Su Mi Kim, Seung Tae Kim, Eugene C. Yi, Cheolju Lee
Software Mentions: 4
Published: over 7 years ago

10.1038/s41598-020-60071-w

Bluephage, a method for efficient detection of somatic coliphages in one hundred milliliter water samples
Cited by: 8
Author(s): J. Méndez, Daniel Toribio-Avedillo, Raquel Mangas-Casas, Judit Martínez-González
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-020-77275-9

COVID-19 predictability in the United States using Google Trends time series
Cited by: 75
Author(s): Amaryllis Mavragani, Κωνσταντίνος Γκίλλας
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-021-91791-2

Variable immunodeficiency score upfront analytical link (VISUAL), a proposal for combined prognostic score at diagnosis of common variable immunodeficiency
Cited by: 1
Author(s): Kissy Guevara-Hoyer, Adolfo Jiménez‐Huete, Júlia Vasconcelos, Esmeralda Neves, Silvia Sánchez-Ramón
Software Mentions: 4
Published: about 5 years ago

10.1167/iovs.61.4.35

Parsimonious Models for Predicting Mortality from Choroidal Melanoma
Cited by: 11
Author(s): Bertil Damato, A. Eleuteri, Rumana Hussain, Helen Kalirai, Sophie Thornton, Azzam Taktak, Heinrich Heimann, Sarah E. Coupland
Software Mentions: 4
Published: over 6 years ago

10.1038/s41598-021-91824-w

Lack of detectable genetic isolation in the cyclic rodent Microtus arvalis despite large landscape fragmentation owing to transportation infrastructures
Cited by: 4
Author(s): Julio Domínguez, María Calero‐Riestra, Pedro P. Olea, Juan E. Malo, Christopher P. Burridge, Kirstin Proft, Sonia Illanas, Javier Viñuela, Jesús T. García
Software Mentions: 4
Published: about 5 years ago

10.3389/fonc.2020.558162

Radiomic Features From Multi-Parameter MRI Combined With Clinical Parameters Predict Molecular Subgroups in Patients With Medulloblastoma
Cited by: 32
Author(s): Jing Yan, Lei Liu, Weiwei Wang, Yuanshen Zhao, Kay Ka‐Wai Li, Ké Li, Li Wang, Binke Yuan, Haiyang Geng, Shenghai Zhang, Zhen Liu, Wenchao Duan, Yunbo Zhan, Dongling Pei, Haibiao Zhao, Tongwen Sun, Chen Sun, Wenqing Wang, Xuanke Hong, Xiangxiang Wang, Yu Guo, Wencai Li, Jingliang Cheng, Xianzhi Liu, Ho‐Keung Ng, Zhicheng Li, Zhenyu Zhang
Software Mentions: 4
Published: almost 6 years ago

10.3389/fonc.2020.00248

A Contrast-Enhanced Computed Tomography Based Radiomics Approach for Preoperative Differentiation of Pancreatic Cystic Neoplasm Subtypes: A Feasibility Study
Cited by: 25
Author(s): Xiaoyong Shen, Fan Yang, Pengfei Yang, Modan Yang, Lei Xu, Jianyong Zhuo, Jianguo Wang, Di Lu, Zhikun Liu, Shusen Zheng, Tianye Niu, Xiao Xu
Software Mentions: 4
Published: over 6 years ago

10.3389/fphar.2020.00604

Distinct Responses of Gut Microbiota to Jian-Pi-Yi-Shen Decoction Are Associated With Improved Clinical Outcomes in 5/6 Nephrectomized Rats
Cited by: 14
Author(s): Lin Zheng, Shuo Chen, Fochang Wang, Shiying Huang, Xinhui Liu, Xiaotao Yang, Haokui Zhou, Guoping Zhao, Mingjing Luo, Shunmin Li, Jianping Chen
Software Mentions: 4
Published: over 6 years ago

10.1038/srep28484

Multiple sclerosis patients have a distinct gut microbiota compared to healthy controls
Cited by: 587
Author(s): Jun Chen, Nicholas Chia, Krishna R. Kalari, Jingwen Yao, Martina Novotná, M. Mateo Paz Soldán, David Luckey, Eric Marietta, Patricio Jeraldo, Xianfeng Chen, Brian G. Weinshenker, Moses Rodriguez, Orhun H. Kantarci, Heidi Nelson, Joseph A. Murray, Ashutosh K. Mangalam
Software Mentions: 4
Published: about 10 years ago

10.1038/s41598-018-27783-6

Dispersal-competition tradeoff in microbiomes in the quest for land colonization
Cited by: 13
Author(s): Francisco Dini‐Andreote, Jan Dirk van Elsas, Han Olff, Joana Falcão Salles
Software Mentions: 4
Published: about 8 years ago

10.1038/s41598-021-97373-6

Microbial transfers from permanent grassland ecosystems to milk in dairy farms in the Comté cheese area
Cited by: 6
Author(s): Nicolas Chemidlin Prévost-Bouré, Battle Karimi, Sophie Sadet-Bourgeteau, Christophe Djemiel, Moon Brie, Jennifer Dumont, M. Campedelli, Virginie Nowak, Philippe Guyot, C. Letourneur, Vincent Manneville, François Gillet, Yvette Bouton
Software Mentions: 4
Published: almost 5 years ago

10.3390/ijerph17197271

Factors Associated with E-Cigarette Use in U.S. Young Adult Never Smokers of Conventional Cigarettes: A Machine Learning Approach
Cited by: 9
Author(s): Nkiruka C. Atuegwu, Cheryl Oncken, Reinhard Laubenbacher, Mario F. Perez, Eric M. Mortensen
Software Mentions: 4
Published: almost 6 years ago

10.3390/ijms22031354

The Importance of Sex in the Discovery of Colorectal Cancer Prognostic Biomarkers
Cited by: 16
Author(s): Linnea Hases, Ahmed Atef Ibrahim, Xinsong Chen, Yanghong Liu, Johan Hartman, Cecilia Williams
Software Mentions: 4
Published: over 5 years ago

10.3390/ijms22073417

Raw Milk-Induced Protection against Food Allergic Symptoms in Mice Is Accompanied by Shifts in Microbial Community Structure
Cited by: 9
Author(s): Suzanne Abbring, Phillip A. Engen, Ankur Naqib, Stefan J. Green, Johan Garssen, Ali Keshavarzian, Betty C.A.M. van Esch
Software Mentions: 4
Published: over 5 years ago

10.1038/s41598-019-49134-9

Exploring the diversity of Poaceae-infecting mastreviruses on Reunion Island using a viral metagenomics-based approach
Cited by: 13
Author(s): Sohini Claverie, Alassane Ouattara, Murielle Hoareau, Denis Filloux, Arvind Varsani, Philippe Roumagnac, Darren P. Martin, Jean‐Michel Lett, Pierre Lefeuvre
Software Mentions: 4
Published: almost 7 years ago

10.1002/bit.26380

Metabolic modeling to identify engineering targets forKomagataella phaffii: The effect of biomass composition on gene target identification
Cited by: 13
Author(s): Ayca Cankorur-Cetinkaya, Duygu Dikicioglu, Stephen G. Oliver
Software Mentions: 4
Published: almost 9 years ago

10.3389/fmicb.2017.00261

Insights into Dynamic Polymicrobial Synergy Revealed by Time-Coursed RNA-Seq
Cited by: 27
Author(s): Erik L. Hendrickson, David A. C. Beck, Daniel P. Miller, Qian Wang, Marvin Whiteley, Richard J. Lamont, Murray Hackett
Software Mentions: 4
Published: over 9 years ago

10.1186/s12864-015-2321-7

Deep sequencing transcriptional fingerprinting of rice kernels for dissecting grain quality traits
Cited by: 16
Author(s): Chiara Biselli, Paolo Bagnaresi, Daniela Cavalluzzo, Simona Urso, Francesca Desiderio, G. Orasen, Alberto Gianinetti, Federico Righettini, M. C. Gennaro, Rosaria Perrini, Manel Ben Hassen, Gian Attilio Sacchi, Luigi Cattivelli, Giampiero Valè
Software Mentions: 4
Published: over 10 years ago

10.3390/ijerph18179208

Incidence of Attention Deficit Hyperactivity Disorder (ADHD) Diagnoses in Navarre (Spain) from 2003 to 2019
Cited by: 2
Author(s): Leire Leache, Olast Arrizibita, Marta Gutiérrez-Valencia, Luis Carlos Saiz, Juan Erviti, Julián Librero
Software Mentions: 4
Published: almost 5 years ago

10.3389/fpsyg.2018.02040

One Direction? A Tutorial for Circular Data Analysis Using R With Examples in Cognitive Psychology
Cited by: 88
Author(s): Jolien Cremers, Irene Klugkist
Software Mentions: 4
Published: almost 8 years ago

10.1371/journal.pone.0069741

Morphological and Genetic Evidence for Multiple Evolutionary Distinct Lineages in the Endangered and Commercially Exploited Red Lined Torpedo Barbs Endemic to the Western Ghats of India
Cited by: 11
Author(s): Lijo John, Siby Philip, Neelesh Dahanukar, P. H. Anvar Ali, Josin Tharian, Rajeev Raghavan, Agostinho Antunes
Software Mentions: 4
Published: about 13 years ago

10.7717/peerj.3452

Discrimination ofPicea chihuahuanaMartinez populations on the basis of climatic, edaphic, dendrometric, genetic and population traits
Cited by: 6
Author(s): Iliana Karina Dominguez-Guerrero, Samantha del Rocío Mariscal-Lucero, José Ciro Hernández-Díaz, Berthold Heinze, José Ángel Prieto-Ruíz, Christian Wehenkel
Software Mentions: 4
Published: about 9 years ago

10.7717/peerj.10057

Brain hothubs and dark functional networks: correlation analysis between amplitude and connectivity for Broca’s aphasia
Cited by: 1
Author(s): Feng Lin, Sheue-yann Cheng, Dongqing Qi, Yu-Er Jiang, Qian-Qian Lyu, Lijuan Zhong, Zhongli Jiang
Software Mentions: 4
Published: almost 6 years ago

10.3390/e23060763

Assessment of Classification Models and Relevant Features on Nonalcoholic Steatohepatitis Using Random Forest
Cited by: 8
Author(s): Rafael García-Carretero, Roberto Holgado-Cuadrado, Óscar Barquero-Pérez
Software Mentions: 4
Published: about 5 years ago

10.1038/s41598-020-79740-x

Combinatorial analyses reveal cellular composition changes have different impacts on transcriptomic changes of cell type specific genes in Alzheimer’s Disease
Cited by: 12
Author(s): Travis Johnson, Shunian Xiang, Tianhan Dong, Zhi Huang, Michael Cheng, Tianfu Wang, Kai Yang, Dong Ni, Kun Huang, Jie Zhang
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pgen.1007357

Robustness encoded across essential and accessory replicons of the ecologically versatile bacterium Sinorhizobium meliloti
Cited by: 48
Author(s): George C. diCenzo, Alex B. Benedict, Marco Fondi, Graham C. Walker, Turlough M. Finan, Alessio Mengoni, Joel S. Griffitts
Software Mentions: 4
Published: over 8 years ago

10.1371/journal.pbio.2005130

High-dimensional single-cell phenotyping reveals extensive haploinsufficiency
Cited by: 25
Author(s): Shinsuke Ohnuki, Yoshikazu Ohya
Software Mentions: 4
Published: about 8 years ago

10.3934/microbiol.2019.1.62

Stability of temperate coral Astrangia poculata microbiome is reflected across different sequencing methodologies
Cited by: 5
Author(s): Dawn B. Goldsmith, Zoe A. Pratte, Christina A. Kellogg, Sara E. Snader, Koty Sharp
Software Mentions: 4
Published: over 7 years ago

10.3389/fpsyg.2021.684249

Feedback From Facial Expressions Contribute to Slow Learning Rate in an Iowa Gambling Task
Cited by: 0
Author(s): Shushi Namba
Software Mentions: 4
Published: almost 5 years ago

10.1007/s10120-020-01116-x

External validity of docetaxel triplet trials in advanced gastric cancer: are there patients who still benefit?
Cited by: 6
Author(s): Paula Jiménez-Fonseca, A. Carmona-Bayonas, Eva Martínez de Castro, Ana Custodio, Carles Pericay Pijaume, R Hernández, Gema Aguado, N. Castro Unanua, Juana María Cano, Flora López, Marcelo Garrido, Ana Montes, Laura Visa, Manuel Sánchez Cánovas, María Luisa Limón, Nieves Martínez Lago, Paola Pimentel, Alicia Hurtado, Aitor Azkárate, Federico Longo, Marc Díez, Aránzazu Arias-Martínez, Tamara Saurí, Alfonso Martín Carnicero, Monserrat Mangas, M Richard, Mónica Granja, Avinash Ramchandani, Carolina Hernández Pérez, Paula Cerdà, Aitziber Gil-Negrete, Mariona Calvo, R. Vidal Tocino, Javier Gállego
Software Mentions: 4
Published: almost 6 years ago

10.31557/APJCP.2021.22.1.105

Spatial Association between Gastric Cancer Mortality and Goiter in Sardinia
Cited by: 5
Author(s): Giovanni Mario Pes, Giuseppe Fanciulli, Alessandro Delitala, Andrea Piana, Maria Pina Dore
Software Mentions: 4
Published: over 5 years ago

10.1098/rsos.200589

Stress and worry in the 2020 coronavirus pandemic: relationships to trust and compliance with preventive measures across 48 countries in the COVIDiSTRESS global survey
Cited by: 71
Author(s): Andreas Lieberoth, Shiang-Yi Lin, Sabrina Stöckli, Hyemin Han, Marta Kowal, Rebekah Gelpí, Stavroula Chrona, Thao Phuong Tran, Alma Jeftić, Jesper Rasmussen, Hüseyin Çakal, Taciano L. Milfont
Software Mentions: 4
Published: over 5 years ago

10.1186/1472-6785-14-22

Causes and consequences of fine-scale population structure in a critically endangered freshwater seal
Cited by: 28
Author(s): Mia Valtonen, Jukka U. Palo, Jouni Aspi, Minna Ruokonen, Mervi Kunnasranta, Tommi Nyman
Software Mentions: 4
Published: over 12 years ago

10.1186/s12898-020-00298-3

The trinity of ecological contrasts: a case study on rich insect assemblages by means of species, functional and phylogenetic diversity measures
Cited by: 6
Author(s): Elia Guariento, Patrick Strutzenberger, Christine Truxa, Konrad Fiedler
Software Mentions: 4
Published: about 6 years ago

10.1186/1471-2148-12-102

Bayesian models for comparative analysis integrating phylogenetic uncertainty
Cited by: 85
Author(s): Pierre de Villemereuil, Jessie A. Wells, R. E. Edwards, Simon P. Blomberg
Software Mentions: 4
Published: about 14 years ago

10.1038/s41598-021-96047-7

Predicting species distributions and community composition using satellite remote sensing predictors
Cited by: 14
Author(s): Jesús N. Pinto‐Ledezma, Jeannine Cavender‐Bares
Software Mentions: 4
Published: almost 5 years ago

10.1186/s12966-021-01187-8

Studying dietary intake in daily life through multilevel two-part modelling: a novel analytical approach and its practical application
Cited by: 2
Author(s): Alea Ruf, Andreas Neubauer, Ulrich W. Ebner‐Priemer, Andreas Reif, Silke Matura
Software Mentions: 4
Published: almost 5 years ago

10.3390/jintelligence8010005

Analysing Standard Progressive Matrices (SPM-LS) with Bayesian Item Response Models
Cited by: 13
Author(s): Paul - Christian Bürkner
Software Mentions: 4
Published: over 6 years ago

10.7554/eLife.52775

Nucleotide inhibition of the pancreatic ATP-sensitive K+ channel explored with patch-clamp fluorometry
Cited by: 18
Author(s): Samuel Usher, Frances M. Ashcroft, Michael C. Puljung
Software Mentions: 4
Published: over 6 years ago

10.7554/eLife.61844

The role of oxytocin in delay of gratification and flexibility in non-social decision making
Cited by: 11
Author(s): Georgia Eleni Kapetaniou, Matthias Reinhard, Patricia Christian, Andrea Jobst, Philippe N. Tobler, Frank Padberg, Alexander Soutschek
Software Mentions: 4
Published: over 5 years ago

10.7554/eLife.28075

Reaction times can reflect habits rather than computations
Cited by: 43
Author(s): Aaron L. Wong, Jeff Goldsmith, Alexander D Forrence, Adrian M. Haith, John W. Krakauer
Software Mentions: 4
Published: about 9 years ago

10.7554/eLife.39656

Time preferences are reliable across time-horizons and verbal versus experiential tasks
Cited by: 7
Author(s): Evgeniya Lukinova, Yuyue Wang, Steven F. Lehrer, Jeffrey C Erlich
Software Mentions: 4
Published: over 7 years ago

10.1038/s42003-019-0689-7

Extensive host-switching of avian feather lice following the Cretaceous-Paleogene mass extinction event
Cited by: 18
Author(s): Robert S. de Moya, Julie M. Allen, Andrew D. Sweet, Kimberly K. O. Walden, Ricardo L. Palma, Vincent Smith, Stephen L. Cameron, Michel P. Valim, Terry D. Galloway, Jason D. Weckstein, Kevin P. Johnson
Software Mentions: 4
Published: over 6 years ago

10.1093/conphys/coaa094

Does Cathaya argyrophylla, an ancient and threatened Pinaceae species endemic to China, show eco-physiological outliers to its Pinaceae relatives?
Cited by: 3
Author(s): Dayong Fan, Xiangping Wang, Wangfeng Zhang, Zhang Xiangying, Shouren Zhang, Zongqiang Xie
Software Mentions: 4
Published: over 6 years ago

10.1007/s12110-020-09368-3

Effects of Individual Mortality Experience on Out-of-Wedlock Fertility in Eighteenth- and Nineteenth-Century Krummhörn, Germany
Cited by: 1
Author(s): Katharina Pink, Kai P. Willführ, Eckart Voland, Paul Puschmann
Software Mentions: 4
Published: about 6 years ago

10.1002/ece3.5032

Dissimilarity of individual microsatellite profiles under different mutation models: Empirical approach
Cited by: 12
Author(s): Evsey Kosman, Jukka Jokela
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.1406

On the analysis of phylogenetically paired designs
Cited by: 13
Author(s): Jennifer L. Funk, Cyril Rakovski, J. Michael Macpherson
Software Mentions: 4
Published: over 11 years ago

10.1002/ece3.6634

The external ear morphology and presence of tragi in Australian marsupials
Cited by: 1
Author(s): Hayley J. Stannard, Kathryn Dennington, Julie M. Old
Software Mentions: 4
Published: almost 6 years ago

10.1186/s13643-019-0963-2

Interventions on children’s and adolescents’ physical activity and sedentary behaviour: protocol for a systematic review from a sex/gender perspective
Cited by: 17
Author(s): Yolanda Demetriou, Catherina Vondung, Jens Bucksch, Annegret Schlund, Carolin Schulze, Guido Knapp, Stephanie E. Coen, Lorri Puil, Susan P. Phillips, Anne K. Reimers
Software Mentions: 4
Published: over 7 years ago

10.1002/ece3.7720

Interspecific variation in mortality and growth and changes in their relationship with size class in an old‐growth temperate forest
Cited by: 5
Author(s): Takashi Masaki, Ryo Kitagawa, Tohru Nakashizuka, Mitsue Shibata, Hiroshi Tanaka
Software Mentions: 4
Published: about 5 years ago

10.1371/journal.pone.0085057

Analysis of the Diversity of Substrate Utilisation of Soil Bacteria Exposed to Cd and Earthworm Activity Using Generalised Additive Models
Cited by: 46
Author(s): Selene Muñiz, Juan Lacarta, María P. Pata, Juan J. Jiménez, Enrique Navarro
Software Mentions: 4
Published: over 12 years ago

10.1038/s41598-021-96268-w

Age-related mushroom body expansion in male sweat bees and bumble bees
Cited by: 2
Author(s): Mallory A. Hagadorn, Karlee Eck, Matthew Del Grosso, Xavier K. Haemmerle, William T. Wcislo, Karen M. Kapheim
Software Mentions: 4
Published: almost 5 years ago

10.1093/bioinformatics/btaa672

A statistical approach for tracking clonal dynamics in cancer using longitudinal next-generation sequencing data
Cited by: 6
Author(s): Dimitrios V Vavoulis, Anthony Cutts, Jenny C. Taylor, Anna Schuh
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pone.0239966

Analysis of mutational and proteomic heterogeneity of gastric cancer suggests an effective pipeline to monitor post-treatment tumor burden using circulating tumor DNA
Cited by: 2
Author(s): Noriyuki Sasaki, Takeshi Iwaya, Tadatoshi Chiba, Masashi Fujita, Ju Zhang, Fumitaka Endo, Mizunori Yaegashi, Tsuyoshi Hachiya, Ryo Sugimoto, Tamotsu Sugai, Doris R. Siwak, Lance A. Liotta, Yiling Lu, Gordon B. Mills, Hidewaki Nakagawa, Satoshi Nishizuka
Software Mentions: 4
Published: almost 6 years ago

10.1016/j.csbj.2016.11.005

Bioinformatics strategies for taxonomy independent binning and visualization of sequences in shotgun metagenomics
Cited by: 102
Author(s): Karel Sedlář, Kristyna Kupkova, Ivo Provazník
Software Mentions: 4
Published: over 9 years ago

10.1002/ece3.6351

Dark diversity reveals importance of biotic resources and competition for plant diversity across habitats
Cited by: 10
Author(s): Camilla Fløjgaard, Jose W. Valdez, Lars Dalby, Jesper Erenskjold Moeslund, Kevin Kuhlmann Clausen, Rasmus Ejrnæs, Meelis Pärtel, Ane Kirstine Brunbjerg
Software Mentions: 4
Published: about 6 years ago

10.18632/oncotarget.26352

Genomic characterization of metastatic ultra-hypermutated interdigitating dendritic cell sarcoma through rapid research autopsy
Cited by: 6
Author(s): Hui-Zi Chen, Russell Bonneville, Lianbo Yu, Michele R. Wing, Julie W. Reeser, Melanie A. Krook, Jharna Miya, Eric Samorodnitsky, Amy M. Smith, Dorrelyn M. Martin, Thuy Dao, Qishan Guo, David A. Liebner, Aharon G. Freud, Patricia Allenby, Sameek Roychowdhury
Software Mentions: 4
Published: over 7 years ago

10.1093/aob/mcaa103

Red flowers differ in shades between pollination systems and across continents
Cited by: 21
Author(s): Zhe Chen, Ning Yang, Liu Chang-qiu, Hang Sun
Software Mentions: 4
Published: about 6 years ago

10.1093/aobpla/plab032

Acid or base? How do plants regulate the ecology of their phylloplane?
Cited by: 10
Author(s): Kadeem J. Gilbert, Tanya Renner
Software Mentions: 4
Published: about 5 years ago

10.1186/s12862-015-0430-1

Identifying environmental versus phylogenetic correlates of behavioural ecology in gibbons: implications for conservation management of the world’s rarest ape
Cited by: 7
Author(s): Jessica V. Bryant, Valérie A. Olson, Helen J. Chatterjee, Samuel T. Turvey
Software Mentions: 4
Published: almost 11 years ago

10.1186/s12862-018-1166-5

Evolutionary transitions in body plan and reproductive mode alter maintenance metabolism in squamates
Cited by: 18
Author(s): Lin Zhang, Kun Guo, Guang Zheng Zhang, Long Hui Lin, Xiang Ji
Software Mentions: 4
Published: over 8 years ago

10.1186/s12862-019-1473-5

From low to high latitudes: changes in fatty acid desaturation in mammalian fat tissue suggest a thermoregulatory role
Cited by: 12
Author(s): Alicia Guerrero, Tracey L. Rogers
Software Mentions: 4
Published: about 7 years ago

10.7717/peerj.10950

Phylogenetically-controlled correlates of primate blinking behaviour
Cited by: 2
Author(s): Sean A. Rands
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0140577

How Many Parasites Species a Frog Might Have? Determinants of Parasite Diversity in South American Anurans
Cited by: 47
Author(s): Karla Magalhães Campião, Augusto Cesar de Aquino Ribas, Drausio Honório Morais, Reinaldo José da Silva, Luiz Eduardo Roland Tavares
Software Mentions: 4
Published: almost 11 years ago

10.1371/journal.pone.0192172

The influence of speed and size on avian terrestrial locomotor biomechanics: Predicting locomotion in extinct theropod dinosaurs
Cited by: 29
Author(s): Peter J. Bishop, David F. Graham, L. P. Lamas, John R. Hutchinson, Jonas Rubenson, Jennifer Ann Hancock, Robbie S. Wilson, Scott Hocknull, Rod Barrett, David G. Lloyd, Christofer J. Clemente
Software Mentions: 4
Published: over 8 years ago

10.1038/s42003-021-02254-3

Plasma methionine metabolic profile is associated with longevity in mammals
Cited by: 7
Author(s): Natàlia Mota‐Martorell, Mariona Jové, Rebeca Berdún, Reinald Pamplona
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.7784

Spatial patterns in the size of Chinese lizards are driven by multiple factors
Cited by: 4
Author(s): Tao Liang, Zi Zhang, Wanting Dai, Lei Shi, Changhu Lu
Software Mentions: 4
Published: about 5 years ago

10.1002/ece3.3777

Evolution of a key trait greatly affects underground community assembly process through habitat adaptation in earthworms
Cited by: 9
Author(s): Hiroshi Ikeda, Kayoko Fukumori, Etsuko Shoda‐Kagaya, Masamichi Takahashi, Masamichi Ito, Yoshimi Sakai, Kazuma Matsumoto
Software Mentions: 4
Published: over 8 years ago

10.1002/ece3.8087

Large brain size is associated with low extra‐pair paternity across bird species
Cited by: 6
Author(s): Min Chen, Guopan Li, Jinlong Liu, Shaobin Li
Software Mentions: 4
Published: almost 5 years ago

10.1002/ece3.3613

The roles of environment, space, and phylogeny in determining functional dispersion of rodents (Rodentia) in the Hengduan Mountains, China
Cited by: 18
Author(s): Yuanbao Du, Zhixin Wen, Jinlong Zhang, Xue Lv, Jilong Cheng, Deyan Ge, Lin Xia, Qisen Yang
Software Mentions: 4
Published: over 8 years ago

10.1002/ece3.7132

Impacts of growth form and phylogenetic relatedness on seed germination: A large‐scale analysis of a subtropical regional flora
Cited by: 3
Author(s): Juhong Wang, Guangdong Xu, Cuié Wen, Yang Ma, Wei Qi, Chunhui Zhang, Xianliang Cui
Software Mentions: 4
Published: over 5 years ago

10.1186/s12866-021-02122-4

Amplicon-based skin microbiome profiles collected by tape stripping with different adhesive film dressings: a comparative study
Cited by: 3
Author(s): Kazuhiro Ogai, Katsushi Shibata, N. Takahashi, Kohei Ogura, Shigefumi Okamoto, Junko Sugama
Software Mentions: 4
Published: over 5 years ago

10.1186/s12889-019-6765-6

Life on holidays: differences in activity composition between school and holiday periods in Australian children
Cited by: 22
Author(s): Tim Olds, Carol Maher, Dorothea Dumuid
Software Mentions: 4
Published: about 7 years ago

10.1186/s13104-018-4038-6

Biological control agent Rhizobium (=Agrobacterium) vitis strain ARK-1 suppresses expression of the essential and non-essential vir genes of tumorigenic R. vitis
Cited by: 95
Author(s): Akira Kawaguchi, Mizuho Nita, Tomoya Ishii, Megumi Watanabe, Yoshiteru Noutoshi
Software Mentions: 4
Published: over 7 years ago

10.1186/s12936-016-1558-1

Geographical patterns of malaria transmission based on serological markers for falciparum and vivax malaria in Ratanakiri, Cambodia
Cited by: 18
Author(s): Karen Kerkhof, Vincent Sluydts, Somony Heng, Saorin Kim, Myrthe Pareyn, Laura Willen, Lydie Canier, Siv Sovannaroth, Didier Ménard, Tho Sochantha, Marc Coosemans, Lies Durnez
Software Mentions: 4
Published: almost 10 years ago