Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1002/cam4.1965

https://doi.org/10.1002/cam4.1965

Effects of ursodeoxycholic acid on the gut microbiome and colorectal adenoma development

Cited by: 62
Author(s): Talima Pearson, J. Gregory Caporaso, Monica Yellowhair, Nicholas A. Bokulich, Megha Padi, Denise J. Roe, Betsy C. Wertheim, Mark Linhart, Jessica A. Martinez, Cherae Bilagody, Heidie Hornstra, David S. Alberts, Peter Lance, Patricia A. Thompson
Published: over 5 years ago

Software Mentions 4

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
pypi: demux
Application for demultiplexing sequence data
Papers that mentioned: 37
pypi: phylogeny
An exploration of algorithms for phylogeny reconstruction.
Papers that mentioned: 65
pypi: q2
A reinforcement learning framework and command line tool
Papers that mentioned: 27