pypi: q2 | Projects | Ecosyste.ms: Papers

10.1002/ece3.6305

Effects of diet, habitat, and phylogeny on the fecal microbiome of wild African savanna (<i>Loxodonta africana</i>) and forest elephants (<i>L. cyclotis</i>)
Cited by: 16
Author(s): Kris Budd, Joe C. Gunn, Tabitha Finch, Katy E. Klymus, Noah Sitati, Lori S. Eggert
Software Mentions: 8
Published: over 4 years ago

10.1128/mSystems.00510-21

Dysbiosis of the Urinary Bladder Microbiome in Cats with Chronic Kidney Disease
Cited by: 5
Author(s): Younjung Kim, Maura Carrai, Marcus H. Y. Leung, Jaime Chin, Jun Li, Patrick K. H. Lee, Julia A. Beatty, Dirk U. Pfeiffer, Vanessa R. Barrs
Software Mentions: 7
Published: over 3 years ago

10.3389/fvets.2021.664318

Longitudinal Survey of Fecal Microbiota in Healthy Dogs Administered a Commercial Probiotic
Cited by: 3
Author(s): Susan Ciaravolo, Lina María Martínez-López, Richard Allcock, Andrew Woodward, Caroline Mansfield
Software Mentions: 6
Published: over 3 years ago

10.1186/s42523-021-00095-3

Evolution of rumen and oral microbiota in calves is influenced by age and time of weaning
Cited by: 19
Author(s): Nida Amin, Sarah Schwarzkopf, Asako Kinoshita, Johanna Tröscher-Mußotter, Sven Dänicke, Amélia Camarinha‐Silva, Korinna Huber, Jana Frahm, Jana Seifert
Software Mentions: 5
Published: over 3 years ago

10.1002/cam4.1965

Effects of ursodeoxycholic acid on the gut microbiome and colorectal adenoma development
Cited by: 62
Author(s): Talima Pearson, J. Gregory Caporaso, Monica Yellowhair, Nicholas A. Bokulich, Megha Padi, Denise J. Roe, Betsy C. Wertheim, Mark Linhart, Jessica A. Martinez, Cherae Bilagody, Heidie Hornstra, David S. Alberts, Peter Lance, Patricia A. Thompson
Software Mentions: 4
Published: almost 6 years ago

10.3389/fmicb.2021.633396

The Sputum Microbiome in Pulmonary Tuberculosis and Its Association With Disease Manifestations: A Cross-Sectional Study
Cited by: 8
Author(s): Monica R. Ticlla, Jerry Hella, Hellen Hiza, Mohamed Sasamalo, Francis Mhimbira, Liliana K. Rutaihwa, Sara Droz, Sarah Schaller, Klaus Reither, Markus Hilty, Iñaki Comas, Christian Beisel, Christoph D. Schmid, Lukas Fenner, Sébastien Gagneux
Software Mentions: 4
Published: over 3 years ago

10.3390/insects11090645

Diet Breadth Affects Bacterial Identity but Not Diversity in the Pollen Provisions of Closely Related Polylectic and Oligolectic Bees
Cited by: 10
Author(s): Jason A. Rothman, Diana Cox-Foster, Corey J. Andrikopoulos, Quinn S. McFrederick
Software Mentions: 4
Published: over 4 years ago

10.3389/fmicb.2021.667257

Microbiome Structure of the Aphid Myzus persicae (Sulzer) Is Shaped by Different Solanaceae Plant Diets
Cited by: 12
Author(s): Bin He, Xiaoyulong Chen, Hong Yang, Tomislav Cernava
Software Mentions: 4
Published: over 3 years ago

10.3390/jcm10051097

Urinary Microbiome Characteristics in Female Patients with Acute Uncomplicated Cystitis and Recurrent Cystitis
Cited by: 18
Author(s): Jeong‐Ju Yoo, Hee Bong Shin, Ju Sun Song, Minjung Kim, Jina Yun, Zisun Kim, Yoo Min Lee, Sang Wook Lee, Kwang Woo Lee, Woong Bin Kim, Chang Beom Ryu, Sung Woo Park, Seong Kyu Park, Ho‐Yeon Song, Young Ho Kim
Software Mentions: 3
Published: almost 4 years ago

10.1038/s41598-021-88823-2

Evaluation of changes in intestinal microbiota in Crohn’s disease patients after anti-TNF alpha treatment
Cited by: 17
Author(s): Laura Sanchis-Artero, Juan F. Martínez-Blanch, Sergio Manresa-Vera, Ernesto Cortés‐Castell, Marina Valls-Gandia, Marisa Iborra, Jose Maria Paredes-Arquiola, Maia Boscá-Watts, José María Huguet, Rafael Gil-Borrás, Josefa Rodríguez-Morales, Xavier Cortés-Rizo
Software Mentions: 3
Published: over 3 years ago

10.1002/cam4.2660

Oral microbial community composition is associated with pancreatic cancer: A case‐control study in Iran
Cited by: 36
Author(s): Emily Vogtmann, Yongli Han, J. Gregory Caporaso, Nicholas A. Bokulich, Muhammad Ashraf, Alireza Moayyedkazemi, Xing Hua, Farin Kamangar, Yunhu Wan, Shalabh Suman, Bin Zhu, Amy Hutchinson, Casey Dagnall, Kristine Jones, Belynda Hicks, Jianxin Shi, Reza Malekzadeh, Christian C. Abnet, Akram Pourshams
Software Mentions: 3
Published: about 5 years ago

10.1111/prd.12359

Optimizing the quality of clinical studies on oral microbiome: A practical guide for planning, performing, and reporting
Cited by: 44
Author(s): Egija Zaura, Vincent Y. Pappalardo, Mark J. Buijs, C.M.C. Volgenant, Bernd W. Brandt
Software Mentions: 3
Published: about 4 years ago

10.3389/fmicb.2020.592248

Gut Microbial Dysbiosis and Plasma Metabolic Profile in Individuals With Vitiligo
Cited by: 19
Author(s): Qingrong Ni, Zhubiao Ye, Yinghan Wang, Jianru Chen, Weigang Zhang, Cuiling Ma, Kai Li, Yu Liu, Ling Liu, Zheyi Han, Tianwen Gao, Zhe Jian, Shuli Li, Chunying Li
Software Mentions: 3
Published: about 4 years ago

10.3389/fpsyt.2020.00353

Association of the Salivary Microbiome With Animal Contact During Early Life and Stress-Induced Immune Activation in Healthy Participants
Cited by: 3
Author(s): Dominik Langgartner, Cristian A. Zambrano, Jared D. Heinze, Christopher E. Stamper, Till S. Böbel, Sascha B. Hackl, Marc N. Jarczok, Nicolas Rohleder, G. A. W. Rook, Harald Gündel, Christiane Waller, Christopher A. Lowry, Stefan O. Reber
Software Mentions: 3
Published: over 4 years ago

10.3389/fmicb.2021.632280

Microbial Community Dynamics of Soybean (Glycine max) Is Affected by Cropping Sequence
Cited by: 8
Author(s): Ayooluwa Bolaji, Joey Wan, Christopher L. Manchur, Yvonne Lawley, Teresa R. de Kievit, W. G. Dilantha Fernando, Mark F. Belmonte
Software Mentions: 3
Published: almost 4 years ago

10.1186/s12866-020-02069-y

Leptospira in river and soil in a highly endemic area of Ecuador
Cited by: 13
Author(s): Erin B. Miller, Verónica Barragán, J. Chiriboga, Chad Allen Weddell, Ligia Luna, Dulce Jiménez, John Aleman, Joseph R. Mihaljevic, Sonora Olivas, Jane C. Marks, Ricardo Izurieta, Nathan C. Nieto, Paul Keim, Gabriel Trueba, J. Gregory Caporaso, Talima Pearson
Software Mentions: 2
Published: almost 4 years ago

10.1002/mbo3.1141

Skin and stinger bacterial communities in two critically endangered rays from the South Atlantic in natural and aquarium settings
Cited by: 5
Author(s): Fernanda Gonçalves e Silva, Henrique F. Santos, D. L. Leite, Daniela Silva Lutfi, Marcelo Vianna, Alexandre Soares Rosado
Software Mentions: 2
Published: about 4 years ago

10.3390/microorganisms8030342

Standardization of Plant Microbiome Studies: Which Proportion of the Microbiota is Really Harvested?
Cited by: 15
Author(s): Abdoul Razack Sare, Gilles Stouvenakers, Mathilde Eck, Amber Lampens, Sofie Goormachtig, M. Haïssam Jijakli, Sébastien Massart
Software Mentions: 2
Published: almost 5 years ago

10.1016/j.csbj.2021.01.007

Evolution of bacteria in the human gut in response to changing environments: An invisible player in the game of health
Cited by: 5
Author(s): Aarushi Venkatakrishnan, Zoie E. Holzknecht, Rob Holzknecht, Dawn E. Bowles, Sanet H. Kotzé, Jennifer L. Modliszewski, William Parker
Software Mentions: 2
Published: almost 4 years ago

10.1111/eva.12956

Phylogenetic farming: Can evolutionary history predict crop rotation via the soil microbiome?
Cited by: 16
Author(s): Ian Kaplan, Nicholas A. Bokulich, J. Gregory Caporaso, Laramy Enders, Wadih Ghanem, Kathryn S. Ingerslew
Software Mentions: 2
Published: over 4 years ago

10.3389/fcimb.2020.596149

Metagenomic Analysis of the Gut Microbiota of Wild Mice, a Newly Identified Reservoir of Campylobacter
Cited by: 9
Author(s): Hyokeun Song, Junhyung Kim, Jae-Ho Guk, Woo-Hyun Kim, Hajin Nam, Jun-Gyo Suh, Je Kyung Seong, Seongbeom Cho
Software Mentions: 2
Published: almost 4 years ago

10.3389/fimmu.2021.683387

An Immunologic Compatibility Testing Was Not Useful for Donor Selection in Fecal Microbiota Transplantation for Ulcerative Colitis
Cited by: 5
Author(s): Manuel Ponce-Alonso, Carlota García-Hoz, Ana Verónica Halperin, Javier Nuño, Pilar Nicolás, Adolfo Martínez-perez, Juan Ocaña, Juan Carlos García Pérez, Antonio Guerrero, Antonio López-Sanromán, Rafael Cantón, Garbiñe Roy, Rosa del Campo
Software Mentions: 2
Published: over 3 years ago

10.1186/s13059-019-1789-x

Maturation of the infant rhesus macaque gut microbiome and its role in the development of diarrheal disease
Cited by: 36
Author(s): Nicholas S Rhoades, Tasha Barr, Sara M Hendrickson, Kamm Prongay, Andrew J Haertel, Leanne Gill, Laura Garzel, Katrine Whiteson, Mark K. Slifka, Ilhem Messaoudi
Software Mentions: 2
Published: over 5 years ago

10.3390/medicines8070034

Gut Microbiota Regulates the Interaction between Diet and Genetics to Influence Glucose Tolerance
Cited by: 3
Author(s): Jeralyn Jones Franson, Julianne H. Grose, Kaitlyn Williams Larson, Laura C. Bridgewater
Software Mentions: 2
Published: over 3 years ago

10.3390/sports9020014

Impact of Different Exercise Modalities on the Human Gut Microbiome
Cited by: 41
Author(s): Dierdra Bycura, Anthony Santos, Arron Shiffer, Shari Kyman, Kyle N. Winfree, Jay T. Sutliffe, Talima Pearson, Derek L. Sonderegger, Emily K. Cope, J. Gregory Caporaso
Software Mentions: 1
Published: almost 4 years ago

10.1128/mSphere.00208-19

Rapidly Processed Stool Swabs Approximate Stool Microbiota Profiles
Cited by: 19
Author(s): Nicholas A. Bokulich, Juan Maldonado, Dae Wook Kang, Rosa Krajmalnik‐Brown, J. Gregory Caporaso
Software Mentions: 1
Published: over 5 years ago

10.3390/microorganisms9020220

The Oral Bacterial Community in Melanophryniscus admirabilis (Admirable Red-Belly Toads): Implications for Conservation
Cited by: 4
Author(s): Michele Bertoni Mann, Janira Prichula, Ícaro Maia Santos de Castro, Juliana Mello Severo, Michelle Abadie, Thayná Mendes de Freitas Lima, Valentina Zaffaroni Caorsi, Márcio Borges Martins, Jeverson Frazzon, Ana Paula Guedes Frazzon
Software Mentions: 1
Published: almost 4 years ago

Ecosyste.ms: Papers

Projects: pypi: q2

Papers Mentioning q2 27