10.1002/ece3.4500

A metabarcoding approach for the feeding habits of European hake in the Adriatic Sea
Cited by: 17
Author(s): Giulia Riccioni, Marco Stagioni, Corrado Piccinetti, Simone Libralato
Software Mentions: 5
Published: almost 8 years ago

10.1371/journal.pone.0212185

Physical environmental conditions determine ubiquitous spatial differentiation of standing plants and seedbanks in Neotropical riparian dry forests
Cited by: 2
Author(s): Alejandra De León Ibarra, Néstor A. Mariano, Valentino Sorani, Gabriel Flores‐Franco, Evodio Rendón Alquicira, Elisabet V. Wehncke
Software Mentions: 5
Published: over 7 years ago

10.3389/fonc.2021.663556

Identification of a Three-RNA Binding Proteins (RBPs) Signature Predicting Prognosis for Breast Cancer
Cited by: 14
Author(s): Yang Liu, Hefen Sun, Xuan Li, Qiqi Liu, Yuanyuan Zhao, Liangdong Li, Baojin Xu, Yifeng Hou, Wei Jin
Software Mentions: 5
Published: about 5 years ago

10.1371/journal.pone.0255391

Not just trash birds: Quantifying avian diversity at landfills using community science data
Cited by: 9
Author(s): Zachary J. Arnold, Seth J. Wenger, Richard J. Hall
Software Mentions: 5
Published: almost 5 years ago

10.7717/peerj.11898

Biogeography, diversity and environmental relationships of shelf and deep-sea benthic Amphipoda around Iceland
Cited by: 7
Author(s): Anne‐Nina Lörz, Stefanie Kaiser, Jens Oldeland, Caroline Stolter, Karlotta Kürzel, Saskia Brix
Software Mentions: 5
Published: almost 5 years ago

10.7717/peerj.7014

Soil bacterial and fungal communities of six bahiagrass cultivars
Cited by: 10
Author(s): Lukas Beule, Ko‐Hsuan Chen, Chih‐Ming Hsu, Cheryl L. Mackowiak, José C. B. Dubeux, Ann R. Blount, Hui‐Ling Liao
Software Mentions: 5
Published: about 7 years ago

10.1186/s40168-020-00858-1

Using soil bacterial communities to predict physico-chemical variables and soil quality
Cited by: 113
Author(s): Syrie M. Hermans, Hannah Buckley, Bradley S. Case, Fiona Curran-Cournane, Mykel R. Taylor, Gavin Lear
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-018-36709-1

Urogenital schistosomiasis is associated with signatures of microbiome dysbiosis in Nigerian adolescents
Cited by: 27
Author(s): Olumide Ajibola, Aislinn D. Rowan, Clement O. Ogedengbe, Mari B. Mshelia, Damien J. Cabral, Anthonius A. Eze, Stephen K. Obaro, Peter Belenky
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-018-36768-4

Consistent Reanalysis of Genome-wide Imprinting Studies in Plants Using Generalized Linear Models Increases Concordance across Datasets
Cited by: 10
Author(s): Stefan Wyder, Michael T. Raissig, Ueli Grossniklaus
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-39318-8

Identifying Windows of Susceptibility by Temporal Gene Analysis
Cited by: 9
Author(s): Kristin P. Bennett, Elisabeth M. Brown, Hannah De los Santos, Matthew Poegel, Thomas R. Kiehl, Evan W. Patton, Spencer Norris, Sally Temple, John S. Erickson, Deborah L. McGuinness, Nathan C. Boles
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-40375-2

Transcriptome analysis of rumen epithelium and meta-transcriptome analysis of rumen epimural microbial community in young calves with feed induced acidosis
Cited by: 21
Author(s): Wenli Li, S.L. Gelsinger, Andrea Edwards, Christina Riehle, Daniel C. Koch
Software Mentions: 5
Published: over 7 years ago

10.1186/s13756-018-0336-y

Estimating the burden of antimicrobial resistance: a systematic literature review
Cited by: 318
Author(s): Nichola R. Naylor, Rifat Atun, Nina Zhu, Kavian Kulasabanathan, Sachin Silva, Anuja Chatterjee, Gwenan M. Knight, Julie V. Robotham
Software Mentions: 5
Published: about 8 years ago

10.3389/fphar.2018.00305

Frequency of CYP2D6 Alleles Including Structural Variants in the United States
Cited by: 81
Author(s): Andria L. Del Tredici, Alka Malhotra, Matthew Dedek, Frank G. Espin, Daniel E. Roach, Guang dan Zhu, Joseph R. Voland, Tanya A. Moreno
Software Mentions: 5
Published: over 8 years ago

10.1590/1678-4685-GMB-2019-0270

Methodological differences can affect sequencing depth with a possible impact on the accuracy of genetic diagnosis
Cited by: 2
Author(s): Murilo Guimarães Borges, Cristiane S. Rocha, Benilton Carvalho, Íscia Lopes‐Cendes
Software Mentions: 5
Published: over 6 years ago

10.1186/s13059-015-0685-2

Distinct roles of DNMT1-dependent and DNMT1-independent methylation patterns in the genome of mouse embryonic stem cells
Cited by: 64
Author(s): Chi Kong Li, Hongzheng Dai, Suzanne N. Martos, Beisi Xu, Yang Gao, Li Teng, Guangjing Zhu, Dustin E. Schones, Zhibin Wang
Software Mentions: 5
Published: about 11 years ago

10.7717/peerj.4292

The French press: a repeatable and high-throughput approach to exercising zebrafish (<i>Danio rerio</i>)
Cited by: 5
Author(s): Takuji Usui, Daniel W. A. Noble, Rose E. O’Dea, Melissa L. Fangmeier, Malgorzata Lagisz, Daniel Hesselson, Shinichi Nakagawa
Software Mentions: 5
Published: over 8 years ago

10.1186/s13059-019-1906-x

scRNA-seq assessment of the human lung, spleen, and esophagus tissue stability after cold preservation
Cited by: 257
Author(s): Elo Madissoon, Anna Wilbrey-Clark, Ricardo J. Miragaia, Kourosh Saeb‐Parsy, Krishnaa Mahbubani, Nikitas Georgakopoulos, Philippa Harding, Krzysztof Polański, Ni Huang, Karol Nowicki-Osuch, Rebecca C. Fitzgerald, Kevin Loudon, John R. Ferdinand, Menna R. Clatworthy, Anthi Tsingene, Stijn van Dongen, Monika Dąbrowska, Minal Patel, Michael J T Stubbington, Sarah A. Teichmann, Oliver Stegle, Kerstin B. Meyer
Software Mentions: 5
Published: over 6 years ago

10.1093/gbe/evx269

A Genome Resequencing-Based Genetic Map Reveals the Recombination Landscape of an Outbred Parasitic Nematode in the Presence of Polyploidy and Polyandry
Cited by: 53
Author(s): Stephen R. Doyle, Roz Laing, David J. Bartley, Collette Britton, Umer Chaudhry, John S. Gilleard, Nancy Holroyd, Barbara K. Mable, Kirsty Maitland, Alison A. Morrison, Andy Tait, Alan S. Tracey, Matthew Berriman, Eileen Devaney, James A. Cotton, Neil Sargison
Software Mentions: 5
Published: over 8 years ago

10.7717/peerj.7033

The influence of pharmacologically-induced affective states on attention bias in sheep
Cited by: 14
Author(s): Jessica E. Monk, Lee C, Sue Belson, Ian G. Colditz, Dennis Campbell
Software Mentions: 5
Published: about 7 years ago

10.1120/jacmp.v16i3.5634

2015 AAPM Spring Clinical Meeting - Abstracts
Cited by: 0
Author(s):
Software Mentions: 5
Published: about 11 years ago

10.3390/cells9091924

Microcurrent Stimulation Triggers MAPK Signaling and TGF-β1 Release in Fibroblast and Osteoblast-Like Cell Lines
Cited by: 14
Author(s): Evangelia Konstantinou, Zoi Zagoriti, Anastasia Pyriochou, Konstantinos Poulas
Software Mentions: 5
Published: almost 6 years ago

10.1186/s13073-021-00885-z

Cryopreservation of human cancers conserves tumour heterogeneity for single-cell multi-omics analysis
Cited by: 24
Author(s): Sunny Z. Wu, Daniel Roden, Ghamdan Al-Eryani, Nenad Bartoniček, Kate Harvey, Aurélie Cazet, Chia-Ling Chan, Simon Junankar, Mun Hui, Ewan A. Millar, Julia Beretov, Lisa Kristina Horvath, Anthony M. Joshua, Phillip D. Stricker, James S. Wilmott, Camelia Quek, Georgina V. Long, Richard A. Scolyer, Bertrand Z. Yeung, Davendra Segara, Cindy Mak, Sanjay Warrier, Joseph E. Powell, Sandra A. O’Toole, Elgene Lim, Alexander Swarbrick
Software Mentions: 5
Published: about 5 years ago

10.1186/s12868-021-00635-2

Early postnatal irradiation‐induced age‐dependent changes in adult mouse brain: MRI based characterization
Cited by: 5
Author(s): Bo Ren, Isaac Huen, Zi Jun Wu, Hong Wang, Meng Yun Duan, Ilonka Guenther, Kritika Prakash, Feng Ru Tang
Software Mentions: 5
Published: about 5 years ago

10.1093/gigascience/giab067

Association of female reproductive tract microbiota with egg production in layer chickens
Cited by: 5
Author(s): Yuan Su, Shilin Tian, Diyan Li, Wei Zhu, Tao Wang, Suchismita Mishra, Ranlei Wei, Zhongxian Xu, Mengnan He, Xiaoling Zhao, Huadong Yin, Xiaolan Fan, Bo Zeng, Mingyao Yang, Deying Yang, Qingyong Ni, Yan Li, Mingwang Zhang, Qing Zhu, Mingzhou Li
Software Mentions: 5
Published: almost 5 years ago

10.1093/aobpla/plz017

Recent range expansion in Australian hummock grasses (Triodia) inferred using genotyping-by-sequencing
Cited by: 12
Author(s): Benjamin M. Anderson, Kevin R. Thiele, Pauline F. Grierson, Siegfried L. Krauss, Paul Nevill, Ian Small, Xue Zhong, Matthew D. Barrett
Software Mentions: 5
Published: over 7 years ago

10.3390/cells8080919

The Combination of IFN β and TNF Induces an Antiviral and Immunoregulatory Program via Non-Canonical Pathways Involving STAT2 and IRF9
Cited by: 11
Author(s): Mélissa K. Mariani, Pouria Dasmeh, Audray Fortin, Élise Caron, Mario Kalamujic, Alexander N. Harrison, Diana Ioana Hotea, Dacquin M. Kasumba, Sandra Cervantes-Ortiz, Espérance Mukawera, Adrian W.R. Serohijos, Nathalie Grandvaux
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-018-34412-9

RNA-Seq transcriptomic profiling of primary murine microglia treated with LPS or LPS + IFNγ
Cited by: 29
Author(s): Marta Pulido-Salgado, José M. Vidal-Taboada, Gerardo Garcıa-Dıaz Barriga, Carme Solà, Josep Saura
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-019-40910-1

Phosphorus source driving the soil microbial interactions and improving sugarcane development
Cited by: 25
Author(s): Thiago Gumière, Alain N. Rousseau, Diogo Paes da Costa, Alice de Souza Cassetari, Simone Raposo Cotta, Fernando Dini Andreote, Silvio José Gumière, Paulo Sérgio Pavinato
Software Mentions: 5
Published: over 7 years ago

10.7717/peerj.9003

Changes in the gut microbiota during Asian particolored bat (<i>Vespertilio sinensis</i>) development
Cited by: 8
Author(s): Zongsheng Yin, Keping Sun, Aoqiang Li, Deyi Sun, Zhongle Li, Guohong Xiao, Feng Jiang
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-018-21118-1

The utility of a network–based clustering method for dimension reduction of imaging and non-imaging biomarkers predictive of Alzheimer’s disease
Cited by: 2
Author(s): Haruhiko Yoshida, Atsushı Kawaguchi, Fumio Yamashita, Kazuhiko Tsuruya
Software Mentions: 5
Published: over 8 years ago

10.1016/j.devcel.2020.11.013

Diverse Routes toward Early Somites in the Mouse Embryo
Cited by: 40
Author(s): Carolina Guibentif, J. B. Griffiths, Iván Imaz-Rosshandler, Shila Ghazanfar, Jennifer Nichols, Valerie Wilson, Berthold Göttgens, John C. Marioni
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.ppat.1004856

An Ultrasensitive Mechanism Regulates Influenza Virus-Induced Inflammation
Cited by: 27
Author(s): Jason E. Shoemaker, Satoru Fukuyama, Amie J. Eisfeld, Dongming Zhao, Eiryo Kawakami, Saori Sakabe, Tadashi Maemura, Takeo Gorai, Hiroaki Katsura, Yukiko Muramoto, Shinji Watanabe, Tokiko Watanabe, Ken Fuji, Yoshikazu Matsuoka, Hiroaki Kitano, Yoshihiro Kawaoka
Software Mentions: 5
Published: about 11 years ago

10.3390/jcm9092930

Proteomic Profiles of Exosomes of Septic Patients Presenting to the Emergency Department Compared to Healthy Controls
Cited by: 8
Author(s): Daniel C. Morris, Anja Kathrin Jaehne, Michael Chopp, Zhanggang Zhang, Laila Poisson, Yalei Chen, Indrani Datta, Emanuel P. Rivers
Software Mentions: 5
Published: almost 6 years ago

10.3390/insects12070584

Intrasexual Vibrational Behavior of Philaenus spumarius in Semi-Field Conditions
Cited by: 5
Author(s): Imane Akassou, Sabina Avosani, Valentina Zaffaroni Caorsi, Vincenzo Verrastro, Marco Ciolli, Valerio Mazzoni
Software Mentions: 5
Published: about 5 years ago

10.1002/ece3.7946

Restored and remnant Banksia woodlands elicit different foraging behavior in avian pollinators
Cited by: 2
Author(s): Alison Ritchie, Catherine Elliott, Elizabeth A. Sinclair, Siegfried L. Krauss
Software Mentions: 5
Published: almost 5 years ago

10.7717/peerj.4398

Repeatability of glucocorticoid hormones in vertebrates: a meta-analysis
Cited by: 52
Author(s): Kelsey L Schoenemann, Frances Bonier
Software Mentions: 5
Published: over 8 years ago

10.1111/ele.12794

Less favourable climates constrain demographic strategies in plants
Cited by: 78
Author(s): Anna Mária Csergő, Roberto Salguero‐Gómez, Olivier Broennimann, Shaun R. Coutts, Antoine Guisan, Amy L. Angert, Erik Welk, Iain Stott, Brian J. Enquist, Brian J. McGill, Jens Christian Svenning, Cyrille Violle, Yvonne M. Buckley
Software Mentions: 5
Published: about 9 years ago

10.1007/s43926-021-00016-5

Social media analytics of the Internet of Things
Cited by: 4
Author(s): Jim Scheibmeir, Yashwant K. Malaiya
Software Mentions: 5
Published: almost 5 years ago

10.1186/s40104-020-00542-2

Linkage between the intestinal microbiota and residual feed intake in broiler chickens
Cited by: 26
Author(s): Jing Liu, Sydney Stewart, Kelsy Robinson, Qing Yang, Wentao Lyu, Melanie A. Whitmore, Guolong Zhang
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0151342

Mining Social Entrepreneurship Strategies Using Topic Modeling
Cited by: 23
Author(s): Yanto Chandra, Li Jiang, Chengjun Wang
Software Mentions: 5
Published: over 10 years ago

10.1371/journal.pone.0134509

A Social Network Approach Reveals Associations between Mouse Social Dominance and Brain Gene Expression
Cited by: 103
Author(s): Nina L. T. So, Becca Franks, Sean C. Lim, James P. Curley
Software Mentions: 5
Published: almost 11 years ago

10.1021/acs.jcim.0c01382

Use of the Complementarity Principle in Docking Procedures: A New Approach for Evaluating the Correctness of Binding Poses
Cited by: 12
Author(s): Hrvoje Rimac, Maria Grishina, В. А. Потемкин
Software Mentions: 5
Published: over 5 years ago

10.1186/s13321-020-00420-z

COVER: conformational oversampling as data augmentation for molecules
Cited by: 19
Author(s): Jennifer Hemmerich, E. Asilar, Gerhard F. Ecker
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pone.0251458

Statistical privacy-preserving message broadcast for peer-to-peer networks
Cited by: 1
Author(s): David Mödinger, Jan-Hendrik Lorenz, Franz J. Hauck
Software Mentions: 5
Published: about 5 years ago

10.1093/femsyr/foab011

Transcriptomic response of Saccharomyces cerevisiae to octanoic acid production
Cited by: 2
Author(s): Leonie Baumann, Tyler W. Doughty, Verena Siewers, Jens Nielsen, Eckhard Boles, Mislav Oreb
Software Mentions: 5
Published: over 5 years ago

10.1007/s11306-015-0927-z

GC–MS metabolic profiling of Cabernet Sauvignon and Merlot cultivars during grapevine berry development and network analysis reveals a stage- and cultivar-dependent connectivity of primary metabolites
Cited by: 51
Author(s): Álvaro Cuadros-Inostroza, Simón Ruíz-Lara, Enrique González, Änne Eckardt, Lothar Willmitzer, Hugo Peña‐Cortés
Software Mentions: 5
Published: over 10 years ago

10.1007/s00265-015-2050-6

Sex and friendship in a multilevel society: behavioural patterns and associations between female and male Guinea baboons
Cited by: 51
Author(s): Adeelia S. Goffe, Dietmar Zinner, Julia Fischer
Software Mentions: 5
Published: over 10 years ago

10.1038/s41597-021-00896-w

Generation of a mouse SWATH-MS spectral library to quantify 10148 proteins involved in cell reprogramming
Cited by: 4
Author(s): Uxue Ulanga, Matthew R. Russell, Stefano Patassini, Julie Brazzatti, Ciaren Graham, Anthony D. Whetton, R.L. Graham
Software Mentions: 5
Published: about 5 years ago

10.1186/s13068-016-0652-5

Presence does not imply activity: DNA and RNA patterns differ in response to salt perturbation in anaerobic digestion
Cited by: 56
Author(s): Jo De Vrieze, Leticia Regueiro, Ruben Props, Ramiro Vílchez-Vargas, Ruy Jáuregui, Dietmar H. Pieper, Juan M. Lema, Marta Carballa
Software Mentions: 5
Published: over 9 years ago

10.1186/s12864-020-6517-0

Repetitive DNA content in the maize genome is uncoupled from population stratification at SNP loci
Cited by: 2
Author(s): Simon Renny‐Byfield, Andy Baumgarten
Software Mentions: 5
Published: over 6 years ago

10.3390/ani10081321

Social Experience of Captive Livingstone’s Fruit Bats (Pteropus livingstonii)
Cited by: 7
Author(s): Morgan J. Welch, Teresa M. Smith, Charlotte A. Hosie, Dominic Wormell, Eluned C. Price, Christina R. Stanley
Software Mentions: 5
Published: almost 6 years ago

10.7150/thno.53229

Neoantigen landscape in metastatic nasopharyngeal carcinoma
Cited by: 13
Author(s): Lin Mei, Xiaolong Zhang, Rui You, Qi Yang, Xiong Zou, Kai Yu, You‐Ping Liu, Ruhai Zou, Yi-Jun Hua, Pei‐Yu Huang, Jin Wang, Qi Zhao, Xiaobing Jiang, Jun Tang, Yeunhwa Gu, Tao Yu, Guangcun He, YuLong Xie, Zhi‐Qiang Wang, Ting Liu, Siyuan Chen, Zhixiang Zuo, Ming‐Yuan Chen
Software Mentions: 5
Published: over 5 years ago

10.1186/1471-2105-13-113

Molecular ecological network analyses
Cited by: 1,612
Author(s): Ye Deng, Yi-Huei Jiang, Yunfeng Yang, Zhili He, Feng Luo, Jizhong Zhou
Software Mentions: 5
Published: about 14 years ago

10.1038/s41598-017-00665-z

Delta-radiomics features for the prediction of patient outcomes in non–small cell lung cancer
Cited by: 238
Author(s): Xenia Fave, Lifei Zhang, Jinzhong Yang, D. Mackin, Peter A Balter, Daniel R. Gomez, David S Followill, A. Kyle Jones, Francesco C. Stingo, Zhongxing Liao, Radhe Mohan, Laurence Edward Court
Software Mentions: 5
Published: over 9 years ago

10.3389/fonc.2020.566183

Comprehensive Analysis of CDCAs Methylation and Immune Infiltrates in Hepatocellular Carcinoma
Cited by: 8
Author(s): Yongkang Wang, Yinfeng Yang, Honglei Gao, Ting Ouyang, Luyao Zhang, Jili Hu, Hu Sheng, Hongxing Kan
Software Mentions: 5
Published: over 5 years ago

10.3389/fonc.2020.01119

Identification of RNA: 5-Methylcytosine Methyltransferases-Related Signature for Predicting Prognosis in Glioma
Cited by: 23
Author(s): Peng Wang, Minxian Wu, Zewei Tu, Chuming Tao, Qing Hu, Kuangxun Li, Xingen Zhu, Kai Huang
Software Mentions: 5
Published: almost 6 years ago

10.1002/ece3.5404

Migration distance does not predict blood parasitism in a migratory songbird
Cited by: 7
Author(s): Marjorie C. Sorensen, Tanmay Dixit, Kevin J. Kardynal, Jason Newton, Keith A. Hobson, Staffan Bensch, Susanne Jenni‐Eiermann, Claire N. Spottiswoode
Software Mentions: 5
Published: about 7 years ago

10.1038/s41598-018-19939-1

Acute effects of air pollution on respiratory disease mortalities and outpatients in Southeastern China
Cited by: 46
Author(s): Zhe Mo, Qiang Fu, Lifang Zhang, Danni Lyu, Guangming Mao, Lizhi Wu, Pingwei Xu, Zhifang Wang, Xuejiao Pan, Zhijian Chen, Xiaofeng Wang, Xiaoming Lou
Software Mentions: 5
Published: over 8 years ago

10.3390/ani9110970

Enzymatically Digested Food Waste Altered Fecal Microbiota But Not Meat Quality and Carcass Characteristics of Growing-Finishing Pigs
Cited by: 2
Author(s): Cynthia Jinno, Perot Saelao, Elizabeth A. Maga, Arthur S. King, Dan Morash, Steven M. Zicari, Xiang Yang, Yanhong Liu
Software Mentions: 5
Published: over 6 years ago

10.3389/fonc.2020.00081

A 6 lncRNA-Based Risk Score System for Predicting the Recurrence of Colon Adenocarcinoma Patients
Cited by: 18
Author(s): Haojie Yang, Hong-Cheng Lin, Lun Hua, Dan Gan, Wei Jin, Can Cui, Yixin Yan, Yiming Qian, Changpeng Han, Zhenyi Wang
Software Mentions: 5
Published: over 6 years ago

10.1186/s12864-016-3135-y

A comparative study of ChIP-seq sequencing library preparation methods
Cited by: 21
Author(s): Arvind Sundaram, Timothy R. Hughes, Shea Biondi, Nathalie Bolduc, Sarah K. Bowman, Andrew Camilli, Yap Ching Chew, Catherine Couture, Andrew Farmer, John P. Jerome, David W. Lazinski, Andrew McUsic, Peng Xu, Kamran Shazand, Feng Xu, Robert Lyle, Gregor D. Gilfillan
Software Mentions: 5
Published: over 9 years ago

10.3389/fmicb.2020.00360

Time-Course RNAseq Reveals Exserohilum turcicum Effectors and Pathogenicity Determinants
Cited by: 16
Author(s): Maria Petronella Human, David Kenneth Berger, Bridget Genevieve Crampton
Software Mentions: 5
Published: over 6 years ago

10.1038/s41396-020-0606-6

Genetic variation and evolutionary history of a mycorrhizal fungus regulate the currency of exchange in symbiosis with the food security crop cassava
Cited by: 12
Author(s): Romain Savary, Cindy Dupuis, Frédéric G. Masclaux, Ivan D. Mateus, Edward C. Rojas, Ian R. Sanders
Software Mentions: 5
Published: over 6 years ago

10.1371/journal.pcbi.1000815

NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail
Cited by: 284
Author(s): Padraig Gleeson, Sharon Crook, Robert C. Cannon, Michael L. Hines, Guy O Billings, Matteo Farinella, Thomas M. Morse, Andrew P. Davison, Subhasis Ray, Upinder S. Bhalla, Simon R Barnes, Yoana D Dimitrova, R. Angus Silver
Software Mentions: 5
Published: about 16 years ago

10.1038/s41598-017-15629-6

Innate Cell-Mediated Cytotoxic Activity of European Sea Bass Leucocytes Against Nodavirus-Infected Cells: A Functional and RNA-seq Study
Cited by: 30
Author(s): Elena Chaves-Pozo, Yulema Valero, Anna Esteve‐Codina, Jèssica Gómez-Garrido, Marc Dabad, Tyler Alioto, José Meseguer, M. Ángeles Esteban, Alberto Cuesta
Software Mentions: 5
Published: over 8 years ago

10.3389/fpls.2020.00132

Developmental Analysis of Mimulus Seed Transcriptomes Reveals Functional Gene Expression Clusters and Four Imprinted, Endosperm-Expressed Genes
Cited by: 9
Author(s): Miguel A. Flores‐Vergara, Elen Oneal, Mário Costa, Gonzalo H. Villarino, Caitlyn Roberts, María Angels de Luis Balaguer, Sı́lvia Coimbra, John H. Willis, Robert G. Franks
Software Mentions: 5
Published: over 6 years ago

10.1186/s42523-020-00058-0

Characterizing the cirri and gut microbiomes of the intertidal barnacle Semibalanus balanoides
Cited by: 1
Author(s): Bianca R. P. Brown, Joaquin C. B. Nunez, David M. Rand
Software Mentions: 5
Published: over 5 years ago

10.1002/bimj.201800222

Multiple imputation for discrete data: Evaluation of the joint latent normal model
Cited by: 17
Author(s): Matteo Quartagno, James Carpenter
Software Mentions: 5
Published: over 7 years ago

10.3389/fnmol.2018.00481

Common CHD8 Genomic Targets Contrast With Model-Specific Transcriptional Impacts of CHD8 Haploinsufficiency
Cited by: 30
Author(s): A. Ayanna Wade, Kenneth J. Lim, Rinaldo Catta-Preta, Alexander Nord
Software Mentions: 5
Published: over 7 years ago

10.1038/s41598-018-32917-x

Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes
Cited by: 42
Author(s): Babett Günther, Thomas Knebelsberger, Hermann Neumann, Silke Laakmann, Pedro Martínez Arbizu
Software Mentions: 5
Published: almost 8 years ago

10.1038/s41598-019-57108-0

Transcriptional analysis identifies potential biomarkers and molecular regulators in pneumonia and COPD exacerbation
Cited by: 15
Author(s): Wilhelm Bertrams, Kathrin Griss, Maria Han, Kerstin Seidel, Andreas Klemmer, Alexandra Sittka-Stark, Stefan Hippenstiel, Norbert Suttorp, Florian Finkernagel, Jochen Wilhelm, Timm Greulich, Claus Vogelmeier, Julio Vera, Bernd Schmeck
Software Mentions: 5
Published: over 6 years ago

10.1186/1756-3305-7-249

Individual experience affects host choice in malaria vector mosquitoes
Cited by: 21
Author(s): Amélie Vantaux, Thierry Léfèvre, Roch K. Dabiré, Anna Cohuet
Software Mentions: 5
Published: over 12 years ago

10.1186/s12935-020-01243-6

Identification of a competing endogenous RNA network associated with prognosis of pancreatic adenocarcinoma
Cited by: 24
Author(s): Wanqing Weng, Zhongjing Zhang, Weiguo Huang, Xiangxiang Xu, Boda Wu, Tingbo Ye, Yunfeng Shan, Ke–Qing Shi, Zhuo Lin
Software Mentions: 5
Published: about 6 years ago

10.1002/ece3.5449

Conversion of rainforest to oil palm and rubber plantations alters energy channels in soil food webs
Cited by: 21
Author(s): Winda Ika Susanti, Melanie M. Pollierer, Rahayu Widyastuti, Stefan Scheu, Anton Potapov
Software Mentions: 5
Published: almost 7 years ago

10.1038/s41598-020-67690-3

Transcriptomic analysis of the mechanisms of alleviating renal interstitial fibrosis using the traditional Chinese medicine Kangxianling in a rat model
Cited by: 13
Author(s): Yufeng Jiang, Yaohan Zhu, Timing Zhen, Jie Li, Kaichen Xing, Liqun He, Sibo Zhu
Software Mentions: 5
Published: about 6 years ago

10.1038/s41598-020-67871-0

Chloroplast DNA analysis of the invasive weed, Himalayan balsam (Impatiens glandulifera), in the British Isles
Cited by: 5
Author(s): Daisuke Kurose, Kathryn M. Pollard, C. A. Ellison
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pntd.0005693

Evolution and spread of Venezuelan equine encephalitis complex alphavirus in the Americas
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Author(s): Naomi L. Forrester, Joel O. Wertheim, Vivian G. Dugan, Albert J. Auguste, David L. Lin, Alexandra Adams, Rubing Chen, Rodion Gorchakov, Grace Leal, José G. Estrada-Franco, Jyotsna Pandya, Rebecca Halpin, Kumar Hari, Ravi Jain, Timothy B. Stockwell, Suman Das, David E. Wentworth, Martin D. Smith, Sergei L. Kosakovsky Pond, Scott C. Weaver
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-020-70206-8

Remote, autonomous real-time monitoring of environmental DNA from commercial fish
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Author(s): Brian Klitgaard Hansen, Marianne Jacobsen, Anne Lise Middelboe, Christina M. Preston, Roman Marin, Dorte Bekkevold, Steen Wilhelm Knudsen, Peter Rask Møller, Einar Eg Nielsen
Software Mentions: 5
Published: almost 6 years ago

10.7717/peerj.3657

<tt>phydms</tt>: software for phylogenetic analyses informed by deep mutational scanning
Cited by: 21
Author(s): Sarah K Hilton, Michael B. Doud, Jesse D Bloom
Software Mentions: 5
Published: almost 9 years ago

10.1038/s41598-018-27068-y

Climatic niche divergence drives patterns of diversification and richness among mammal families
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Author(s): Adrián Castro‐Insua, Carola Gómez‐Rodríguez, John J. Wiens, Andrés Baselga
Software Mentions: 5
Published: about 8 years ago

10.1186/s13059-015-0716-z

Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays
Cited by: 191
Author(s): Matteo Dell’Acqua, Daniel M. Gatti, G. Pea, Federica Cattonaro, Frederik Coppens, Gabriele Magris, Aye L. Hlaing, Htay Htay Aung, Hilde Nelissen, Joke Baute, Elisabetta Frascaroli, Gary A. Churchill, Dirk Inzé, Michèle Morgante, Mario Enrico Pè
Software Mentions: 5
Published: almost 11 years ago

10.1186/s13059-017-1310-3

Topological organization and dynamic regulation of human tRNA genes during macrophage differentiation
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Author(s): Kevin Van Bortle, Douglas H. Phanstiel, M Snyder
Software Mentions: 5
Published: almost 9 years ago

10.1111/cpr.12968

Systemic transcriptome comparison between early‐ And late‐onset pre‐eclampsia shows distinct pathology and novel biomarkers
Cited by: 15
Author(s): Fang Guo, Zhenan Bao, Hao Yang, Yixi Fu, Yaning Wang, Jianming Huang, Min Cheng, Xiaobo Li, Zhuo Shen, Li Li, Ping He, Andy Peng Xiang, Shuaiyu Wang, Hongbo Zhang
Software Mentions: 5
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10.1186/s13059-020-02048-6

Systematic assessment of tissue dissociation and storage biases in single-cell and single-nucleus RNA-seq workflows
Cited by: 289
Author(s): Elena Denisenko, Belinda Guo, Matthew Jones, Rui Hou, Leanne de Kock, Timo Lassmann, Daniel Poppe, C Olivier, Rebecca K. Simmons, Ryan Lister, Alistair R.R. Forrest
Software Mentions: 5
Published: about 6 years ago

10.1111/mec.15539

No evidence for accumulation of deleterious mutations and fitness degradation in clonal fish hybrids: Abandoning sex without regrets
Cited by: 16
Author(s): Ján Kočí, Jan Röslein, Jan Pačes, Jan Kotusz, Karel Halačka, Ján Koščo, Jakub Fedorčák, Nataliia Iakovenko, Karel Janko
Software Mentions: 5
Published: almost 6 years ago

10.3390/microorganisms8050695

Tocilizumab for Treatment of Severe COVID-19 Patients: Preliminary Results from SMAtteo COvid19 REgistry (SMACORE)
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Author(s): Marta Colaneri, Laura Bogliolo, Pietro Valsecchi, Paolo Sacchi, Valentina Zuccaro, Fabio Brandolino, Carlomaurizio Montecucco, Francesco Mojoli, Emanuele Maria Giusti, Raffaele Bruno
Software Mentions: 5
Published: about 6 years ago

10.1121/10.0003529

Remote sociophonetic data collection: Vowels and nasalization over video conferencing apps
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Author(s): Valerie Freeman, Paul De Decker
Software Mentions: 5
Published: over 5 years ago

10.1186/s12967-019-1783-9

Mathematical models of amino acid panel for assisting diagnosis of children acute leukemia
Cited by: 9
Author(s): Zhi-Dai Liu, Tingting Zhou, Xing Han, Tingyuan Lang, Shan Liu, Penghui Zhang, Haiyan Liu, Ke-Xing Wan, Jianhua Yu, Liang Zhang, Liyan Chen, Roger W. Beuerman, Bin Peng, Lei Zhou, Lin Zou
Software Mentions: 5
Published: over 7 years ago

10.3389/fninf.2016.00017

BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience
Cited by: 104
Author(s): Werner Van Geit, Michael Gevaert, Giuseppe Chindemi, Christian Rössert, Jean-Denis Courcol, Eilif Müller, Felix Schürmann, Idan Segev, Henry Markram
Software Mentions: 5
Published: about 10 years ago

10.3390/jcm10040892

Spinal Cord Morphology in Degenerative Cervical Myelopathy Patients; Assessing Key Morphological Characteristics Using Machine Vision Tools
Cited by: 9
Author(s): Kalum Ost, W. Bradley Jacobs, Nathan Evaniew, Julien Cohen‐Adad, David W. Anderson, David W. Cadotte
Software Mentions: 5
Published: over 5 years ago

10.3389/fnut.2020.577923

A Machine Learning Based Dose Prediction of Lutein Supplements for Individuals With Eye Fatigue
Cited by: 4
Author(s): Juntao Kan, Ao Li, Hong Zou, Liang Chen, Jun Du
Software Mentions: 5
Published: over 5 years ago

10.1371/journal.pone.0212849

DeephESC 2.0: Deep Generative Multi Adversarial Networks for improving the classification of hESC
Cited by: 11
Author(s): Rajkumar Theagarajan, Bir Bhanu
Software Mentions: 5
Published: over 7 years ago

10.18699/VJ21.002

Application of alternative &lt;i&gt;de novo&lt;/i&gt; motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA2 binding sites
Cited by: 3
Author(s): Anton Vitalievich Tsukanov, Victor G. Levitsky, Т. И. Меркулова
Software Mentions: 5
Published: over 5 years ago

10.3389/fimmu.2018.02059

A Distinct Esophageal mRNA Pattern Identifies Eosinophilic Esophagitis Patients With Food Impactions
Cited by: 8
Author(s): Benjamin F. Sallis, Utkucan Acar, Kelsey Hawthorne, Stephen Babcock, Cynthia Kanagaratham, Jeffrey D. Goldsmith, Rachel Rosen, Jon A. Vanderhoof, Samuel Nurko, Edda Fiebiger
Software Mentions: 5
Published: over 7 years ago

10.12688/f1000research.17456.1

pdb-tools: a swiss army knife for molecular structures
Cited by: 81
Author(s): João P. G. L. M. Rodrigues, João M.C. Teixeira, Mikaël Trellet, Alexandre M. J. J. Bonvin
Software Mentions: 5
Published: over 7 years ago

10.1371/journal.pcbi.1007438

Humans adapt their anticipatory eye movements to the volatility of visual motion properties
Cited by: 8
Author(s): Chloé Pasturel, Anna Montagnini, Laurent Perrinet
Software Mentions: 5
Published: about 6 years ago

10.3389/fmicb.2018.02680

Germination and Growth Analysis of Streptomyces lividans at the Single-Cell Level Under Varying Medium Compositions
Cited by: 5
Author(s): Joachim Koepff, Christian Carsten Sachs, Wolfgang Wiechert, Dietrich Kohlheyer, Katharina Nöh, Marco Oldiges, Alexander Grünberger
Software Mentions: 5
Published: over 7 years ago

10.1140/epjc/s10052-014-3129-3

Measurement of differential cross sections for the production of a pair of isolated photons in pp collisions at $$\sqrt{s}=7\,\text {TeV} $$ s = 7 TeV
Cited by: 55
Author(s): S. Chatrchyan, V. Khachatryan, A. M. Sirunyan, A. Tumasyan, W. Adam, T. Bergauer, M. Dragicevic, J. Erö, C. Fabjan, M. Friedl, R. Frühwirth, V. M. Ghete, C. Hartl, N. Hörmann, J. Hrubec, M. Jeitler, W. Kiesenhofer, V. Knünz, M. Krammer, I. Krätschmer, D. Liko, I. Mikulec, D. Rabady, B. Rahbaran, H. Rohringer, R. Schöfbeck, J. Strauss, A. Taurok, W. Treberer-Treberspurg, W. Waltenberger, C.-E. Wulz, V. Mossolov, N. Shumeiko, J. Suarez Gonzalez, S. Alderweireldt, M. Bansal, S. Bansal, T. Cornelis, E. A. De Wolf, X. Janssen, A. Knutsson, S. Luyckx, S. Ochesanu, B. Roland, R. Rougny, H. Van Haevermaet, P. Van Mechelen, N. Van Remortel, A. Van Spilbeeck, F. Blekman, S. Blyweert, J. DʼHondt, N. Heracleous, A. Kalogeropoulos, J. Keaveney, T. J. Kim, S. Lowette, M. Maes, A. Olbrechts, D. Strom, S. Tavernier, W. Van Doninck, P. Van Mulders, G. P. Van Onsem, I. Villella, C. Caillol, B. Clerbaux, G. De Lentdecker, L. Favart, A. Léonard, P. E. Marage, A. Mohammadi, L. Perniè, T. Reis, T. Ševa, L. Thomas, C. Vander Velde, P. Vanlaer, J. Wang, V. Adler, K. Beernaert, L. Benucci, A. Cimmino, S. Costantini, S. Crucy, S. Dildick, G. Garcı́a, B. Klein, J. Lellouch, J. Mccartin, A. A. Ocampo Rios, D. Ryckbosch, S. Salva Diblen, M. Sigamani, N. Strobbe, F. Thyssen, M. Tytgat, S. Walsh, E. Yazgan, N. Zaganidis, S. Başeǧmez, C. Beluffi, G. Bruno, R. Castello, A. Caudron, L. Ceard, G. G. Da Silveira, C. Delaere, T. du Pree, D. Favart, L. Forthomme, A. Giammanco, J. Hollar, P. Jež, M. Komm, V. Lemaı̂tre, J. Liao, O. Militaru, C. Nuttens, D. Pagano, A. Pin, K. Piotrzkowski, A. Popov, L. Quertenmont, M. Selvaggi, M. Vidal Marono, J. M. Vizan Garcia, N. Beliy, T. Caebergs, E. Daubie, G. H. Hammad, G. A. Alves, M. Correa Martins, T. Martins, M. E. Pol, M. H.G. Souza, W. L. Aldá Júnior, W. Carvalho, J. Chinellato, A. Custódio, E. M. Da Costa, D. De Jesus Damião, C. De Oliveira Martins, S. Fonseca De Souza, H. Malbouisson, M. Malek, D. Matos Figueiredo, L. Mundim, H. Nogima, W. L. Prado Da Silva, J. Santaolalla, A. Santoro, A. Sznajder, E. J. Tonelli Manganote, A. Vilela Pereira, C. A. Bernardes, F. A. Dias, T. R. Fernandez Perez Tomei, E. M. Gregores, P. G. Mercadante, S. F. Novaes, Sandra S. Padula, V. Genchev, P. Iaydjiev, A. Marinov, S. Piperov, M. Rodozov, G. Sultanov, M. Vutova, A. Dimitrov, I. Glushkov, R. Hadjiiska, V. Kozhuharov, L. Litov, B. Pavlov, P. Petkov, J. G. Bian, G. M. Chen, H. S. Chen, M. Chen, R. Du, C. H. Jiang, D. Liang, S. Liang, X. T. Meng, R. Pleština, J. Tao, X. Wang, Z. Wang, C. Asawatangtrakuldee, Y. Ban, Y. Guo, Q. Li, W. Li, S. Liu, Y. Mao, S. J. Qian, D. Wang, L. Zhang, W. Zou, C. Ávila, L. F. Chaparro Sierra, C. Florez, J. P. Gomez, B. Gomez Moreno, J. C. Sanabria, N. Godinović, D. Lelas, D. Polic, I. Puljak, Ž. Antunović, M. Kovac, V. Brigljević, K. Kadija, J. Luetic, D. Mekterović, S. Morovic, L. Sudic, A. Attikis, G. Mavromanolakis, J. Mousa, C. Nicolaou, F. Ptochos, P. A. Razis, М. Фингер, Y. Assran, S. Elgammal, A. Ellithi Kamel, M. A. Mahmoud, A. Mahrous, A. Radi, M. Kadastik, M. Müntel, M. Murumaa, M. Raidal, A. Tiko, P. Eerola, G. Fedi, M. Voutilainen, J. Härkönen, V. Karimäki, R. Kinnunen, M. J. Kortelainen, T. Lampén, K. Lassila-Perini, S. Lehti, T. Lindén, P. Luukka, T. Maënpaä, T. Peltola, E. Tuominen, J. Tuominiemi, E. Tuovinen, L. Wendland, T. Tuuva, M. Besançon, F. Couderc, M. Déjardin, D. Denegri, B. Fabbro, J. L. Faure, F. Ferri, S. Ganjour, A. Givernaud, P. Gras, G. Hamel de Monchenault, P. Jarry, E. Locci, J. Malclés, A. Nayak, J. Rander, A. Rosowsky, M. Titov, S. Baffioni, F. Beaudette, P. Busson, C. Charlot, N. Daci, T. Dahms, M. Dalchenko, L. Dobrzyński, N. Filipović, A. Florent, R. Granier de Cassagnac, L. Mastrolorenzo, P. Miné, C. Mironov, I. N. Naranjo, M. Nguyen, C. Ochando, P. Paganini, D. Sabes, R. Salerno, J. B. Sauvan, Y. Sirois, C. Veelken, Y. Yilmaz, A. Zabi, J.-L. Agram, J. Andreä, D. Blöch, J.-M. Brom, E. C. Chabert, C. Collard, E. Conte, F. Drouhin, J.-C. Fontaine, D. Gelé, U. Goerlach, C. Goetzmann, P. Juillot, A.-C. Le Bihan, P. Van Hove, S. Gadrat, S. Beauceron, N. Beaupère, G. Boudoul, S. Brochet, C. A. Carrillo Montoya, J. Chasserat, R. Chierici, D. Contardo, P. Depasse, H. El Mamouni, Jing Fan, J. Fay, S. Gascon, M. Gouzevitch, B. Ille, T. Kurča, M. Lethuillier, L. Mirabito, S. Perriès, J. D. Ruiz Alvarez, L. Sgandurra, V. Sordini, M. Vander Donckt, P. Verdier, S. Viret, H. Xiao, Z. Tsamalaidze, C. Autermann, S. Beranek, M. Bontenackels, B. Calpas, M. Edelhoff, L. Felď, O. Hindrichs, K. Klein, A. Ostapchuk, A. Perieanu, F. Raupach, J. Sammet, S. Schael, D. Sprenger, H. Weber, B. Wittmer, В. Жуков, M. Ata, J. Caudron, E. Dietz-Laursonn, D. Duchardt, M. Erdmann, R. Fischer, A. Güth, T. Hebbeker, C. Heidemann, K. Höepfner, D. Klingebiel, S. Knutzen, P. Kreuzer, M. Merschmeyer, A. Meyer, M. Olschewski, K. Padeken, P. Papacz, H. Reithler, Stefan Schmitz, L. Sonnenschein, D. Teyssier, S. Thüer, Martin Weber, V. Cherepanov, Y. Erdogan, G. Flügge, H. Geenen, M. Geisler, W. Haj Ahmad, F. Hoehle, B. Kargoll, T. Kress, Y. Kuessel, J. Lingemann, A. Nowack, I. M. Nugent, L. Perchalla, O. Pooth, A. Stahl, I. Asin, N. Bartosik, J. Behr, W. Behrenhoff, U. Behrens, A. J. Bell, M. Bergholz, A. Bethani, K. Borras, A. Burgmeier, A. Çakır, L. Calligaris, A. Campbell, S. Choudhury, F. Costanza, C. Diez Pardos, S. Dooling, T. Dorland, G. Eckerlin, D. Eckstein, T. Eichhorn, G. Flucke, A. Geiser, A. Grebenyuk, P. Gunnellini, S. Habib, J. Hauk, G. Hellwig, M. Hempel, D. Horton, H. Jung, M. Kasemann, P. Katsas, J. Kieseler, C. Kleinwort, M. Krämer, D. Krücker, W. Lange, J. Leonard, K. Lipka, W. Lohmann, B. Lutz, R. Mankel, I. Marfin, I.-A. Melzer-Pellmann, A. Meyer, J. Mnich, A. Mussgiller, S. Naumann-Emme, O. Novgorodova, F. Nowak, E. Ntomari, H. Perrey, A. Petrukhin, D. Pitzl, R. Plačakytė, A. Raspereza, P. M. Ribeiro Cipriano, C. Riedl, E. Ron, Mehmet Özgür Sahin, J. Salfeld-Nebgen, P. Saxena, R. Schmidt, T. Schöerner-Sadenius, M. Schröder, M. Stein, A. D. R. Vargas Trevino, R. Walsh, C. Wissing, M. Aldaya Martin, V. Blobel, H. Enderle, J. Erfle, E. Garutti, K. Goebel, M. Görner, M. Gosselink, J. Haller, R. S. Höing, H. Kirschenmann, R. Klanner, R. Kogler, J. Lange, T. Lapsien, T. Lenz, I. Marchesini, J. Ott, T. Peiffer, N. Pietsch, D. Rathjens, C. Sander, H. Schettler, P. Schleper, E. Schlieckau, A. Schmidt, M. Seidel, J. Sibille, V. Sola, H. Stadie, G. Steinbrück, D. Troendle, E. Usai, L. Vanelderen, C. Barth, C. Baus, J. Berger, C. Böser, E. Butz, T. Chwalek, W. De Boer, A. Descroix, A. Dierlamm, M. Feindt, M. Guthoff, F. Hartmann, T. Hauth, H. Held, K. H. Hoffmann, U. Husemann, I. Katkov, A. Kornmayer, E. Kuznetsova, P. Lobelle Pardo, D. Martschei, M. U. Mozer, Th. Müller, M. Niegel, A. Nürnberg, O. Oberst, G. Quast, K. Rabbertz, F. Ratnikov, S. Röcker, F. P. Schilling, G. Schott, H. J. Simonis, F. M. Stober, R. Ulrich, J. Wagner-Kuhr, S. Wayand, T. Weiler, R. Wolf, M. Zeise, G. 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Masetti, M. Meneghelli, A. Montanari, F. L. Navarria, F. Odorici, A. Perrotta, F. Primavera, A. Rossi, T. Rovelli, G. P. Siroli, N. Tosi, R. Travaglini, S. Albergo, G. Cappello, M. Chiorboli, S. Costa, F. Giordano, R. Potenza, A. Tricomi, C. Tuvé, G. Barbagli, V. Ciulli, C. Civinini, R. D’Alessandro, E. Focardi, E. Gallo, S. Gonzi, V. Gori, P. Lenzi, M. Meschini, S. Paoletti, G. Sguazzoni, A. Tropiano, L. Benussi, S. Bianco, D. Piccolo, P. Fabbricatore, R. Ferretti, F. Ferro, M. Lo Vetere, R. Musenich, E. Robutti, S. Tosi, M. E. Dinardo, S. Fiorendi, S. Gennai, R. Gerosa, A. Ghezzi, P. Govoni, M. T. Lucchini, S. Malvezzi, R. A. Manzoni, A. Martelli, B. Marzocchi, D. Menasce, L. Moroni, M. Paganoni, D. Pedrini, S. Ragazzi, N. Redaelli, T. Tabarelli de Fatis, S. Buontempo, N. Cavallo, S. Di Guida, F. Fabozzi, A. O. M. Iorio, L. Lista, S. Meola, M. Merola, P. Paolucci, P. Azzi, M. Bellato, M. Biasotto, D. Bisello, A. Branca, P. Checchia, T. Dorigo, U. Dosselli, F. Fanzago, M. Galanti, F. 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Spanier, Z. Yang, A. York, O. Bouhali, R. Eusebi, W. Flanagan, J. Gilmore, T. Kamon, V. Khotilovich, V. Krutelyov, R. Montalvo, I. Osipenkov, Y. Pakhotin, A. Perloff, J. Roe, A. Safonov, T. Sakuma, I. Suarez, A. Tatarinov, D. Toback, N. Akchurin, C. Cowden, J. Damgov, C. Dragoiu, P. R. Dudero, J. Faulkner, K. Kovitanggoon, S. Kunori, S. W. Lee, T. Libeiro, I. Volobouev, E. Appelt, A. G. Delannoy, S. Greene, A. Gurrola, W. Johns, C. Maguire, A. Melo, M. Sharma, P. Sheldon, B. Snook, S. Tuo, J. Velkovska, M. W. Arenton, S. Boutle, B. E. Cox, B. Francis, J. Goodell, R. Hirosky, A. Ledovskoy, C‐Y. Lin, C. Neu, J. Wood, S. Gollapinni, R. Harr, P. E. Karchin, C. Kottachchi Kankanamge Don, P. Lamichhane, Donald Belknap, L. Borrello, D. Carlsmith, M. Cepeda, S. Dasu, S. Đurić, E. Friis, M. Grothe, R. Hall-Wilton, M. Herndon, A. Hervé, P. Klabbers, J. Klukas, A. Lanaro, C. Lazaridis, A. Levine, R. Loveless, A. Mohapatra, I. Ojalvo, T. Perry, Giuseppe Antonio Pierro, G. Polese, I. Ross, T. Sarangi, A. Savin, W. H. Smith, N. Woods
Software Mentions: 5
Published: over 11 years ago

10.1186/1939-8433-6-15

A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress
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Software Mentions: 5
Published: about 13 years ago

10.3389/fninf.2014.00037

Python-based geometry preparation and simulation visualization toolkits for STEPS
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Author(s): Weiliang Chen, Erik De Schutter
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Published: over 12 years ago