Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0174461

https://doi.org/10.1371/journal.pone.0174461

Abnormal expression of mRNA, microRNA alteration and aberrant DNA methylation patterns in rectal adenocarcinoma

Cited by: 21
Author(s): Hua Yang, Xiukun Ma, Xianglong Liu, Xia Yuan, Hai Qin, Xipeng Zhang
Published: over 7 years ago

Software Mentions 5

bioconductor: COHCAP
CpG Island Analysis Pipeline for Illumina Methylation Array and Targeted BS-Seq Data
Papers that mentioned: 11
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: qqman
Q-Q and Manhattan Plots for GWAS Data
Papers that mentioned: 273
pypi: qqman
Draws Manhattan plot and QQ plot using plink assoc output.
Papers that mentioned: 273