Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/msb.20209885

https://doi.org/10.15252/msb.20209885

Genome‐wide off‐rates reveal how DNA binding dynamics shape transcription factor function

Cited by: 12
Author(s): Wim J. de Jonge, Mariël Brok, Philip Lijnzaad, Patrick Kemmeren, Frank C. P. Holstege
Published: about 4 years ago

Software Mentions 5

bioconductor: Biostrings
Efficient manipulation of biological strings
Papers that mentioned: 220
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DNAshapeR
High-throughput prediction of DNA shape features
Papers that mentioned: 10
cran: eulerr
Area-Proportional Euler and Venn Diagrams with Ellipses
Papers that mentioned: 47
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203