Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7717/peerj.4694

https://doi.org/10.7717/peerj.4694

Viromes of one year old infants reveal the impact of birth mode on microbiome diversity

Cited by: 89
Author(s): A. McCann, Feargal J. Ryan, Stephen R. Stockdale, Marion Dalmasso, Tony Blake, C. Anthony Ryan, Catherine Stanton, Susan Mills, R. Paul Ross, Colin Hill
Published: over 6 years ago

Software Mentions 5

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: gplot

A python library to plot charts from google sheet
Papers that mentioned: 130

pypi: pyani

pyani provides a package and script for calculation of genome-scale average nucleotide identity.
Papers that mentioned: 120