Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3390/cancers12123799

https://doi.org/10.3390/cancers12123799

A Topic Modeling Analysis of TCGA Breast and Lung Cancer Transcriptomic Data

Cited by: 11
Author(s): Filippo Valle, Matteo Osella, Michele Caselle
Published: almost 4 years ago

Software Mentions 8

bioconductor: graph

graph: A package to handle graph data structures
Papers that mentioned: 45

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: cox

Tools for Experiment Logging
Papers that mentioned: 40

pypi: figshare

Command-line client for figshare API
Papers that mentioned: 103

pypi: graph

Directed and undirected graph data structures and algorithms.
Papers that mentioned: 45

pypi: lifelines

Survival analysis in Python, including Kaplan Meier, Nelson Aalen and regression
Papers that mentioned: 39

pypi: scikit-learn

A set of python modules for machine learning and data mining
Papers that mentioned: 2,431

pypi: sklearn

deprecated sklearn package, use scikit-learn instead
Papers that mentioned: 559