Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2021.652189

https://doi.org/10.3389/fgene.2021.652189

Cited by: 11
Author(s): Chirag Gupta, Venkategowda Ramegowda, Supratim Basu, Andy Pereira
Published: almost 3 years ago

Software Mentions 13

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: GENIE3

GEne Network Inference with Ensemble of trees
Papers that mentioned: 172

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: piano

Platform for integrative analysis of omics data
Papers that mentioned: 15

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: PRROC

Precision-Recall and ROC Curves for Weighted and Unweighted Data
Papers that mentioned: 35

cran: ROCR

Visualizing the Performance of Scoring Classifiers
Papers that mentioned: 596

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

cran: visNetwork

Network Visualization using 'vis.js' Library
Papers that mentioned: 49

pypi: cufflinks

Productivity Tools for Plotly + Pandas
Papers that mentioned: 415

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: piano

CMS built using Pyramid and MongoDB
Papers that mentioned: 15

pypi: STAMP

A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190